RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	PODN	Q7Z5L7	613 aa		6.3	□□□□□ -1.4
CSMD2-208	ENST00000471438	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	6.3	□□□□□ -1.4
CSMD2-208	ENST00000471438	AGER	Q15109	404 aa		6.29	□□□□□ -1.4
CSMD2-208	ENST00000471438	PRR7	Q8TB68	274 aa		6.29	□□□□□ -1.4
CSMD2-208	ENST00000471438	TULP1	O00294	542 aa	Predicted RBP	6.28	□□□□□ -1.4
CSMD2-208	ENST00000471438	BAG6	P46379	1132 aa		6.28	□□□□□ -1.4
CSMD2-208	ENST00000471438	ILDR2	Q71H61	639 aa		6.28	□□□□□ -1.4
CSMD2-208	ENST00000471438	SH3RF1	Q7Z6J0	888 aa		6.28	□□□□□ -1.4
CSMD2-208	ENST00000471438	LCE3B	Q5TA77	95 aa		6.27	□□□□□ -1.41
CSMD2-208	ENST00000471438	DESI1	Q6ICB0	168 aa		6.27	□□□□□ -1.41
CSMD2-208	ENST00000471438	GPIHBP1	Q8IV16	184 aa		6.27	□□□□□ -1.41
CSMD2-208	ENST00000471438	EMILIN1	Q9Y6C2	1016 aa		6.27	□□□□□ -1.41
CSMD2-208	ENST00000471438	THOC2	Q8NI27	1593 aa	Known RBP	6.27	□□□□□ -1.41
CSMD2-208	ENST00000471438	FSHR	P23945	695 aa		6.26	□□□□□ -1.41
CSMD2-208	ENST00000471438	NEDD1	Q8NHV4	660 aa		6.26	□□□□□ -1.41
CSMD2-208	ENST00000471438	SPINT1	O43278	529 aa		6.25	□□□□□ -1.41
CSMD2-208	ENST00000471438	FURIN	P09958	794 aa		6.25	□□□□□ -1.41
CSMD2-208	ENST00000471438	MAP2K5	Q13163	448 aa		6.25	□□□□□ -1.41
CSMD2-208	ENST00000471438	C4orf48	Q5BLP8	95 aa		6.25	□□□□□ -1.41
CSMD2-208	ENST00000471438	BPHL	Q86WA6	291 aa	Predicted RBP	6.25	□□□□□ -1.41
CSMD2-208	ENST00000471438	FBXO41	Q8TF61	875 aa		6.25	□□□□□ -1.41
CSMD2-208	ENST00000471438	CCDC116	Q8IYX3	515 aa		6.24	□□□□□ -1.41
CSMD2-208	ENST00000471438	FAM217B	Q9NTX9	383 aa	Predicted RBP	6.24	□□□□□ -1.41
CSMD2-208	ENST00000471438	SPDYE5	A6NIY4	337 aa		6.23	□□□□□ -1.41
CSMD2-208	ENST00000471438	MTMR2	Q13614	643 aa		6.23	□□□□□ -1.41
CSMD2-208	ENST00000471438	VASH1	Q7L8A9	365 aa	Predicted RBP	6.23	□□□□□ -1.41
CSMD2-208	ENST00000471438	GPCPD1	Q9NPB8	672 aa		6.23	□□□□□ -1.41
CSMD2-208	ENST00000471438	ARHGEF11	O15085	1522 aa		6.22	□□□□□ -1.41
CSMD2-208	ENST00000471438	GAS6	Q14393	721 aa		6.22	□□□□□ -1.41
CSMD2-208	ENST00000471438	LYPD8	Q6UX82	237 aa		6.22	□□□□□ -1.41
CSMD2-208	ENST00000471438	MAP4K5	Q9Y4K4	846 aa		6.22	□□□□□ -1.41
CSMD2-208	ENST00000471438	ERCC6L2	Q5T890	1561 aa		6.22	□□□□□ -1.41
CSMD2-208	ENST00000471438	IRF6	O14896	467 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	BCR	P11274	1271 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	NDUFV2	P19404	249 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	CLCN1	P35523	988 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	CBLB	Q13191	982 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	PGPEP1	Q9NXJ5	209 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	MAP10	Q9P2G4	905 aa		6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	ZCCHC6	Q5VYS8	1495 aa	Known RBP	6.21	□□□□□ -1.42
CSMD2-208	ENST00000471438	DISP3	Q9P2K9	1392 aa		6.2	□□□□□ -1.42
CSMD2-208	ENST00000471438	CTSO	P43234	321 aa	Predicted RBP	6.2	□□□□□ -1.42
CSMD2-208	ENST00000471438		Q6ZVU0	165 aa		6.2	□□□□□ -1.42
CSMD2-208	ENST00000471438	MBIP	Q9NS73	344 aa		6.2	□□□□□ -1.42
CSMD2-208	ENST00000471438	MOXD2P	A6NHM9	499 aa		6.19	□□□□□ -1.42
CSMD2-208	ENST00000471438	SPIRE2	Q8WWL2	714 aa		6.19	□□□□□ -1.42
CSMD2-208	ENST00000471438	KRTAP4-12	Q9BQ66	201 aa		6.19	□□□□□ -1.42
CSMD2-208	ENST00000471438	C1QTNF2	Q9BXJ5	285 aa		6.19	□□□□□ -1.42
CSMD2-208	ENST00000471438	IGF1R	P08069	1367 aa		6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	SENP3-EIF4A1	A0A087X0R7	540 aa		6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	KRBA1	A5PL33	1030 aa		6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	BTBD11	A6QL63	1104 aa		6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	F12	P00748	615 aa	Predicted RBP	6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	KRI1	Q8N9T8	703 aa	Known RBP	6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	POLM	Q9NP87	494 aa	Predicted RBP	6.18	□□□□□ -1.42
CSMD2-208	ENST00000471438	CYB5RL	Q6IPT4	315 aa		6.17	□□□□□ -1.42
CSMD2-208	ENST00000471438	TRMT44	Q8IYL2	757 aa	Known RBP	6.17	□□□□□ -1.42
CSMD2-208	ENST00000471438	INSM2	Q96T92	566 aa	Predicted RBP	6.17	□□□□□ -1.42
CSMD2-208	ENST00000471438	MINK1	Q8N4C8	1332 aa	Predicted RBP	6.17	□□□□□ -1.42
CSMD2-208	ENST00000471438	SMARCA2	P51531	1590 aa		6.16	□□□□□ -1.42
CSMD2-208	ENST00000471438	RELB	Q01201	579 aa		6.16	□□□□□ -1.42
CSMD2-208	ENST00000471438	RNF217	Q8TC41	542 aa		6.16	□□□□□ -1.42
CSMD2-208	ENST00000471438	CUEDC1	Q9NWM3	386 aa	Predicted RBP	6.16	□□□□□ -1.42
CSMD2-208	ENST00000471438	FOXR1	Q6PIV2	292 aa		6.15	□□□□□ -1.42
CSMD2-208	ENST00000471438	ALYREF	Q86V81	257 aa	Known RBP	6.15	□□□□□ -1.42
CSMD2-208	ENST00000471438	ARMC2	Q8NEN0	867 aa		6.15	□□□□□ -1.42
CSMD2-208	ENST00000471438	ACD	Q96AP0	544 aa		6.15	□□□□□ -1.42
CSMD2-208	ENST00000471438	AGBL1	Q96MI9	1066 aa		6.15	□□□□□ -1.42
CSMD2-208	ENST00000471438	MAGEB6P1	A0A0J9YX57	407 aa		6.14	□□□□□ -1.43
CSMD2-208	ENST00000471438	CCDC102A	Q96A19	550 aa		6.14	□□□□□ -1.43
CSMD2-208	ENST00000471438	CFAP99	D6REC4	459 aa		6.13	□□□□□ -1.43
CSMD2-208	ENST00000471438	GPR25	O00155	361 aa		6.13	□□□□□ -1.43
CSMD2-208	ENST00000471438	KRTAP9-9	Q9BYP9	154 aa		6.13	□□□□□ -1.43
CSMD2-208	ENST00000471438	KRTAP9-4	Q9BYQ2	154 aa		6.13	□□□□□ -1.43
CSMD2-208	ENST00000471438	LRRC4B	Q9NT99	713 aa		6.13	□□□□□ -1.43
CSMD2-208	ENST00000471438	DCAF1	Q9Y4B6	1507 aa		6.13	□□□□□ -1.43
CSMD2-208	ENST00000471438	SSTR3	P32745	418 aa	Predicted RBP	6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	SNRPN	P63162	240 aa	Known RBP	6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	ZMYM1	Q5SVZ6	1142 aa		6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	NBPF14	Q5TI25	921 aa		6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	ZNF837	Q96EG3	531 aa	Predicted RBP	6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	GMCL1	Q96IK5	515 aa		6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	ZNF395	Q9H8N7	513 aa	Predicted RBP	6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	MKL2	Q9ULH7	1088 aa		6.12	□□□□□ -1.43
CSMD2-208	ENST00000471438	NES	P48681	1621 aa		6.11	□□□□□ -1.43
CSMD2-208	ENST00000471438	HECW2	Q9P2P5	1572 aa		6.11	□□□□□ -1.43
CSMD2-208	ENST00000471438	SH3BP5L	Q7L8J4	393 aa		6.11	□□□□□ -1.43
CSMD2-208	ENST00000471438	CARD14	Q9BXL6	1004 aa		6.11	□□□□□ -1.43
CSMD2-208	ENST00000471438	ARAP1	Q96P48	1450 aa		6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	OIP5	O43482	229 aa		6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	COL8A1	P27658	744 aa		6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	DHX9	Q08211	1270 aa	Known RBP	6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	PRPF38B	Q5VTL8	546 aa	Known RBP	6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	LYSMD3	Q7Z3D4	306 aa		6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	TRIM22	Q8IYM9	498 aa		6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	NSFL1C	Q9UNZ2	370 aa	Known RBP	6.1	□□□□□ -1.43
CSMD2-208	ENST00000471438	PER1	O15534	1290 aa	Predicted RBP	6.09	□□□□□ -1.43
CSMD2-208	ENST00000471438	ITGB7	P26010	798 aa		6.09	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms