RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 GLI3P10071 1580 aa10.71□□□□□ -0.69
TRIM59-204ENST00000471396 NLRP6P59044 892 aa10.71□□□□□ -0.69
TRIM59-204ENST00000471396 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRIM59-204ENST00000471396 REM2Q8IYK8 340 aaPredicted RBP10.71□□□□□ -0.69
TRIM59-204ENST00000471396 ANKRD36BQ8N2N9 1353 aa10.7□□□□□ -0.7
TRIM59-204ENST00000471396 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
TRIM59-204ENST00000471396 ZC3H6P61129 1189 aaKnown RBP10.7□□□□□ -0.7
TRIM59-204ENST00000471396 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
TRIM59-204ENST00000471396 BTG4Q9NY30 223 aa10.7□□□□□ -0.7
TRIM59-204ENST00000471396 MYOM1P52179 1685 aa10.69□□□□□ -0.7
TRIM59-204ENST00000471396 LMO7Q8WWI1 1683 aa10.69□□□□□ -0.7
TRIM59-204ENST00000471396 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
TRIM59-204ENST00000471396 GCP02774 474 aa10.69□□□□□ -0.7
TRIM59-204ENST00000471396 HSPA5P11021 654 aaKnown RBP10.69□□□□□ -0.7
TRIM59-204ENST00000471396 VPS72Q15906 364 aa10.69□□□□□ -0.7
TRIM59-204ENST00000471396 GJD4Q96KN9 370 aaPredicted RBP10.69□□□□□ -0.7
TRIM59-204ENST00000471396 CHRNA2Q15822 529 aa10.68□□□□□ -0.7
TRIM59-204ENST00000471396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRIM59-204ENST00000471396 NFAT5O94916 1531 aa10.68□□□□□ -0.7
TRIM59-204ENST00000471396 OVOS2A0A0J9YW53 1432 aa10.67□□□□□ -0.7
TRIM59-204ENST00000471396 OVOS2Q6IE36 1432 aa10.67□□□□□ -0.7
TRIM59-204ENST00000471396 POTEHQ6S545 545 aa10.67□□□□□ -0.7
TRIM59-204ENST00000471396 NME9Q86XW9 330 aa10.67□□□□□ -0.7
TRIM59-204ENST00000471396 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
TRIM59-204ENST00000471396 CCDC9Q9Y3X0 531 aaKnown RBP10.67□□□□□ -0.7
TRIM59-204ENST00000471396 CAMTA1Q9Y6Y1 1673 aa10.66□□□□□ -0.7
TRIM59-204ENST00000471396 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
TRIM59-204ENST00000471396 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
TRIM59-204ENST00000471396 ABCC6O95255 1503 aa10.66□□□□□ -0.7
TRIM59-204ENST00000471396 COL18A1P39060 1754 aa10.65□□□□□ -0.7
TRIM59-204ENST00000471396 SPATA31A5Q5VU36 1347 aa10.65□□□□□ -0.7
TRIM59-204ENST00000471396 SPATA31A7Q8IWB4 1347 aa10.65□□□□□ -0.7
TRIM59-204ENST00000471396 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
TRIM59-204ENST00000471396 COL5A2P05997 1499 aaPredicted RBP10.65□□□□□ -0.7
TRIM59-204ENST00000471396 KIF20BQ96Q89 1820 aa10.64□□□□□ -0.71
TRIM59-204ENST00000471396 ZBTB7CA1YPR0 619 aa10.64□□□□□ -0.71
TRIM59-204ENST00000471396 SOX12O15370 315 aa10.64□□□□□ -0.71
TRIM59-204ENST00000471396 ARHGEF25Q86VW2 580 aa10.64□□□□□ -0.71
TRIM59-204ENST00000471396 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
TRIM59-204ENST00000471396 NSD3Q9BZ95 1437 aa10.63□□□□□ -0.71
TRIM59-204ENST00000471396 THSD7AQ9UPZ6 1657 aa10.63□□□□□ -0.71
TRIM59-204ENST00000471396 LTN1O94822 1766 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
TRIM59-204ENST00000471396 EVA1CP58658 441 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
TRIM59-204ENST00000471396 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 COG3Q96JB2 828 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 POLR3GLQ9BT43 218 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 BRWD3Q6RI45 1802 aa10.62□□□□□ -0.71
TRIM59-204ENST00000471396 CRB1P82279 1406 aa10.6□□□□□ -0.71
TRIM59-204ENST00000471396 RGPD5Q99666 1765 aa10.6□□□□□ -0.71
TRIM59-204ENST00000471396 A0A0G2JS52 829 aa10.6□□□□□ -0.71
TRIM59-204ENST00000471396 FYB1O15117 783 aa10.6□□□□□ -0.71
TRIM59-204ENST00000471396 MYT1Q01538 1121 aa10.6□□□□□ -0.71
TRIM59-204ENST00000471396 LARP1Q6PKG0 1096 aaKnown RBP10.6□□□□□ -0.71
TRIM59-204ENST00000471396 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
TRIM59-204ENST00000471396 WDR17Q8IZU2 1322 aa10.59□□□□□ -0.71
TRIM59-204ENST00000471396 BARGINQ6ZT62 677 aa10.59□□□□□ -0.71
TRIM59-204ENST00000471396 UPF1Q92900 1129 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRIM59-204ENST00000471396 GGNBP2Q9H3C7 697 aa10.59□□□□□ -0.71
TRIM59-204ENST00000471396 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
TRIM59-204ENST00000471396 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.71
TRIM59-204ENST00000471396 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
TRIM59-204ENST00000471396 WNK3Q9BYP7 1800 aa10.58□□□□□ -0.72
TRIM59-204ENST00000471396 C11orf95C9JLR9 678 aaPredicted RBP10.58□□□□□ -0.72
TRIM59-204ENST00000471396 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
TRIM59-204ENST00000471396 TCP11L2Q8N4U5 519 aa10.58□□□□□ -0.72
TRIM59-204ENST00000471396 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
TRIM59-204ENST00000471396 THRAP3Q9Y2W1 955 aaKnown RBP10.58□□□□□ -0.72
TRIM59-204ENST00000471396 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
TRIM59-204ENST00000471396 RTL1A6NKG5 1358 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 KRT27Q7Z3Y8 459 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 PARP4Q9UKK3 1724 aaKnown RBP10.57□□□□□ -0.72
TRIM59-204ENST00000471396 ANKRD26Q9UPS8 1709 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 EP400Q96L91 3159 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 ERBB3P21860 1342 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 MAP3K19Q56UN5 1328 aa10.57□□□□□ -0.72
TRIM59-204ENST00000471396 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
TRIM59-204ENST00000471396 CARD10Q9BWT7 1032 aa10.56□□□□□ -0.72
TRIM59-204ENST00000471396 PANK3Q9H999 370 aa10.56□□□□□ -0.72
TRIM59-204ENST00000471396 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
TRIM59-204ENST00000471396 CCDC7Q96M83 1385 aa10.55□□□□□ -0.72
TRIM59-204ENST00000471396 IP6K1Q92551 441 aa10.55□□□□□ -0.72
TRIM59-204ENST00000471396 NSD2O96028 1365 aa10.54□□□□□ -0.72
TRIM59-204ENST00000471396 KIF24Q5T7B8 1368 aa10.54□□□□□ -0.72
TRIM59-204ENST00000471396 DISP2A7MBM2 1401 aa10.54□□□□□ -0.72
TRIM59-204ENST00000471396 HOXC9P31274 260 aa10.54□□□□□ -0.72
TRIM59-204ENST00000471396 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
TRIM59-204ENST00000471396 PEAK1Q9H792 1746 aa10.54□□□□□ -0.72
TRIM59-204ENST00000471396 FBLN1P23142 703 aa10.53□□□□□ -0.72
TRIM59-204ENST00000471396 AMPHP49418 695 aa10.53□□□□□ -0.72
TRIM59-204ENST00000471396 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
TRIM59-204ENST00000471396 CDCA7Q9BWT1 371 aaPredicted RBP10.53□□□□□ -0.72
TRIM59-204ENST00000471396 WASHC2AQ641Q2 1341 aa10.53□□□□□ -0.72
TRIM59-204ENST00000471396 FLT4P35916 1363 aa10.52□□□□□ -0.72
TRIM59-204ENST00000471396 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms