RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
UBXN4-206ENST00000470687 SH3BP5LQ7L8J4 393 aa6.2□□□□□ -1.42
UBXN4-206ENST00000470687 ARMC2Q8NEN0 867 aa6.2□□□□□ -1.42
UBXN4-206ENST00000470687 CABLES1Q8TDN4 633 aa6.2□□□□□ -1.42
UBXN4-206ENST00000470687 SPINT1O43278 529 aa6.19□□□□□ -1.42
UBXN4-206ENST00000470687 ITGA6P23229 1130 aa6.19□□□□□ -1.42
UBXN4-206ENST00000470687 NBPF14Q5TI25 921 aa6.19□□□□□ -1.42
UBXN4-206ENST00000470687 KANK3Q6NY19 840 aa6.19□□□□□ -1.42
UBXN4-206ENST00000470687 Q6ZVU0 165 aa6.19□□□□□ -1.42
UBXN4-206ENST00000470687 MAGEB6P1A0A0J9YX57 407 aa6.18□□□□□ -1.42
UBXN4-206ENST00000470687 FOXK2Q01167 660 aa6.18□□□□□ -1.42
UBXN4-206ENST00000470687 CBLBQ13191 982 aa6.18□□□□□ -1.42
UBXN4-206ENST00000470687 BARGINQ6ZT62 677 aa6.18□□□□□ -1.42
UBXN4-206ENST00000470687 RIC3Q7Z5B4 369 aa6.18□□□□□ -1.42
UBXN4-206ENST00000470687 VWA5B2Q8N398 1253 aa6.18□□□□□ -1.42
UBXN4-206ENST00000470687 CDC14CA4D256 554 aa6.17□□□□□ -1.42
UBXN4-206ENST00000470687 MARSP56192 900 aaKnown RBP6.17□□□□□ -1.42
UBXN4-206ENST00000470687 PPP1R26Q5T8A7 1209 aaPredicted RBP6.17□□□□□ -1.42
UBXN4-206ENST00000470687 CSPP1Q1MSJ5 1256 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 SV2AQ7L0J3 742 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 PARP9Q8IXQ6 854 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 TSC1Q92574 1164 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 SCARF2Q96GP6 870 aaPredicted RBP6.16□□□□□ -1.42
UBXN4-206ENST00000470687 CARD14Q9BXL6 1004 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 SLC24A3Q9HC58 644 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 PGPEP1Q9NXJ5 209 aa6.16□□□□□ -1.42
UBXN4-206ENST00000470687 CTSOP43234 321 aaPredicted RBP6.15□□□□□ -1.42
UBXN4-206ENST00000470687 QPCTQ16769 361 aa6.15□□□□□ -1.42
UBXN4-206ENST00000470687 ERFEQ4G0M1 354 aa6.15□□□□□ -1.42
UBXN4-206ENST00000470687 XP32Q5T750 250 aa6.15□□□□□ -1.42
UBXN4-206ENST00000470687 ADAMTS2O95450 1211 aa6.14□□□□□ -1.43
UBXN4-206ENST00000470687 LYPD4Q6UWN0 246 aa6.14□□□□□ -1.43
UBXN4-206ENST00000470687 SENP3-EIF4A1A0A087X0R7 540 aa6.13□□□□□ -1.43
UBXN4-206ENST00000470687 GPKOWQ92917 476 aaPredicted RBP eCLIP6.13□□□□□ -1.43
UBXN4-206ENST00000470687 AGBL1Q96MI9 1066 aa6.13□□□□□ -1.43
UBXN4-206ENST00000470687 INSM2Q96T92 566 aaPredicted RBP6.13□□□□□ -1.43
UBXN4-206ENST00000470687 LIMD1Q9UGP4 676 aa6.13□□□□□ -1.43
UBXN4-206ENST00000470687 NUTM2BA6NNL0 878 aaPredicted RBP6.12□□□□□ -1.43
UBXN4-206ENST00000470687 NUTM2EB1AL46 878 aaPredicted RBP6.12□□□□□ -1.43
UBXN4-206ENST00000470687 LILRB3O75022 631 aa6.12□□□□□ -1.43
UBXN4-206ENST00000470687 TUSC1Q2TAM9 212 aa6.12□□□□□ -1.43
UBXN4-206ENST00000470687 NUTM2DQ5VT03 806 aaPredicted RBP6.12□□□□□ -1.43
UBXN4-206ENST00000470687 NUTM2AQ8IVF1 878 aaPredicted RBP6.12□□□□□ -1.43
UBXN4-206ENST00000470687 RNF217Q8TC41 542 aa6.12□□□□□ -1.43
UBXN4-206ENST00000470687 CELA2BP08218 269 aaPredicted RBP6.11□□□□□ -1.43
UBXN4-206ENST00000470687 RELBQ01201 579 aa6.11□□□□□ -1.43
UBXN4-206ENST00000470687 MAP3K10Q02779 954 aa6.11□□□□□ -1.43
UBXN4-206ENST00000470687 SRSF11Q05519 484 aaKnown RBP6.11□□□□□ -1.43
UBXN4-206ENST00000470687 GAS6Q14393 721 aa6.11□□□□□ -1.43
UBXN4-206ENST00000470687 MYSM1Q5VVJ2 828 aa6.11□□□□□ -1.43
UBXN4-206ENST00000470687 HELBQ8NG08 1087 aaPredicted RBP6.11□□□□□ -1.43
UBXN4-206ENST00000470687 KCTD15Q96SI1 283 aaPredicted RBP6.11□□□□□ -1.43
UBXN4-206ENST00000470687 ADAM23O75077 832 aa6.1□□□□□ -1.43
UBXN4-206ENST00000470687 DHX9Q08211 1270 aaKnown RBP6.1□□□□□ -1.43
UBXN4-206ENST00000470687 PLA2G4EQ3MJ16 856 aa6.1□□□□□ -1.43
UBXN4-206ENST00000470687 SLC10A4Q96EP9 437 aa6.1□□□□□ -1.43
UBXN4-206ENST00000470687 POLMQ9NP87 494 aaPredicted RBP6.1□□□□□ -1.43
UBXN4-206ENST00000470687 CDV3Q9UKY7 258 aaKnown RBP6.1□□□□□ -1.43
UBXN4-206ENST00000470687 MSTNO14793 375 aa6.09□□□□□ -1.43
UBXN4-206ENST00000470687 ITGB2P05107 769 aa6.09□□□□□ -1.43
UBXN4-206ENST00000470687 BRPF1P55201 1214 aaPredicted RBP6.09□□□□□ -1.43
UBXN4-206ENST00000470687 RTL5Q5HYW3 569 aaPredicted RBP6.09□□□□□ -1.43
UBXN4-206ENST00000470687 INTS6LQ5JSJ4 861 aaKnown RBP6.09□□□□□ -1.43
UBXN4-206ENST00000470687 SPOCK3Q9BQ16 436 aa6.09□□□□□ -1.43
UBXN4-206ENST00000470687 ARHGAP9Q9BRR9 750 aa6.09□□□□□ -1.43
UBXN4-206ENST00000470687 CUEDC1Q9NWM3 386 aaPredicted RBP6.09□□□□□ -1.43
UBXN4-206ENST00000470687 TRIM66O15016 1216 aa6.08□□□□□ -1.44
UBXN4-206ENST00000470687 FOXD4L5Q5VV16 416 aaPredicted RBP6.08□□□□□ -1.44
UBXN4-206ENST00000470687 PDXDC2PQ6P474 469 aa6.08□□□□□ -1.44
UBXN4-206ENST00000470687 DCAF5Q96JK2 942 aa6.08□□□□□ -1.44
UBXN4-206ENST00000470687 ZNF395Q9H8N7 513 aaPredicted RBP6.08□□□□□ -1.44
UBXN4-206ENST00000470687 ENAMQ9NRM1 1142 aa6.07□□□□□ -1.44
UBXN4-206ENST00000470687 CNTNAP5Q8WYK1 1306 aa6.06□□□□□ -1.44
UBXN4-206ENST00000470687 PHF20L1A8MW92 1017 aa6.06□□□□□ -1.44
UBXN4-206ENST00000470687 PROCP04070 461 aa6.06□□□□□ -1.44
UBXN4-206ENST00000470687 GPBP1L1Q9HC44 474 aaPredicted RBP6.06□□□□□ -1.44
UBXN4-206ENST00000470687 ADH1AP07327 375 aa6.05□□□□□ -1.44
UBXN4-206ENST00000470687 ZBTB33Q86T24 672 aa6.05□□□□□ -1.44
UBXN4-206ENST00000470687 MBIPQ9NS73 344 aa6.05□□□□□ -1.44
UBXN4-206ENST00000470687 FKBPLQ9UIM3 349 aa6.05□□□□□ -1.44
UBXN4-206ENST00000470687 CTDSPL2Q05D32 466 aa6.04□□□□□ -1.44
UBXN4-206ENST00000470687 LYSMD3Q7Z3D4 306 aa6.04□□□□□ -1.44
UBXN4-206ENST00000470687 KDF1Q8NAX2 398 aaPredicted RBP6.04□□□□□ -1.44
UBXN4-206ENST00000470687 ZNF784Q8NCA9 323 aaPredicted RBP6.04□□□□□ -1.44
UBXN4-206ENST00000470687 ZNF837Q96EG3 531 aaPredicted RBP6.04□□□□□ -1.44
UBXN4-206ENST00000470687 OCSTAMPQ9BR26 566 aa6.04□□□□□ -1.44
UBXN4-206ENST00000470687 TMPRSS4Q9NRS4 437 aa6.04□□□□□ -1.44
UBXN4-206ENST00000470687 ZC3H4Q9UPT8 1303 aaKnown RBP6.03□□□□□ -1.44
UBXN4-206ENST00000470687 CLK2P49760 499 aaKnown RBP6.03□□□□□ -1.44
UBXN4-206ENST00000470687 PODNQ7Z5L7 613 aa6.03□□□□□ -1.44
UBXN4-206ENST00000470687 BEND7Q8N7W2 519 aaPredicted RBP6.03□□□□□ -1.44
UBXN4-206ENST00000470687 IGF1RP08069 1367 aa6.03□□□□□ -1.44
UBXN4-206ENST00000470687 LILRA1O75019 489 aa6.02□□□□□ -1.45
UBXN4-206ENST00000470687 BCRP11274 1271 aa6.02□□□□□ -1.45
UBXN4-206ENST00000470687 ADD1P35611 737 aaKnown RBP6.02□□□□□ -1.45
UBXN4-206ENST00000470687 PTGIRP43119 386 aa6.02□□□□□ -1.45
UBXN4-206ENST00000470687 TRIM22Q8IYM9 498 aa6.02□□□□□ -1.45
UBXN4-206ENST00000470687 LRRN4Q8WUT4 740 aa6.02□□□□□ -1.45
UBXN4-206ENST00000470687 GMCL1Q96IK5 515 aa6.02□□□□□ -1.45
UBXN4-206ENST00000470687 AK7Q96M32 723 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms