RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TIMP2P16035 220 aa8.79□□□□□ -1
COL9A1-206ENST00000470652 SH3BP5LQ7L8J4 393 aa8.79□□□□□ -1
COL9A1-206ENST00000470652 ADH1CP00326 375 aa8.78□□□□□ -1
COL9A1-206ENST00000470652 ARID5BQ14865 1188 aa8.78□□□□□ -1
COL9A1-206ENST00000470652 SH3RF1Q7Z6J0 888 aa8.78□□□□□ -1
COL9A1-206ENST00000470652 FAM174AQ8TBP5 190 aa8.78□□□□□ -1
COL9A1-206ENST00000470652 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
COL9A1-206ENST00000470652 GPSM3Q9Y4H4 160 aa8.78□□□□□ -1
COL9A1-206ENST00000470652 PTK2Q05397 1052 aa8.77□□□□□ -1.01
COL9A1-206ENST00000470652 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1.01
COL9A1-206ENST00000470652 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
COL9A1-206ENST00000470652 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
COL9A1-206ENST00000470652 KLF16Q9BXK1 252 aaPredicted RBP8.76□□□□□ -1.01
COL9A1-206ENST00000470652 MAGEB6P1A0A0J9YX57 407 aa8.75□□□□□ -1.01
COL9A1-206ENST00000470652 FLIIQ13045 1269 aa8.75□□□□□ -1.01
COL9A1-206ENST00000470652 MCM6Q14566 821 aa8.74□□□□□ -1.01
COL9A1-206ENST00000470652 ZBTB33Q86T24 672 aa8.74□□□□□ -1.01
COL9A1-206ENST00000470652 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
COL9A1-206ENST00000470652 MAN1A2O60476 641 aa8.73□□□□□ -1.01
COL9A1-206ENST00000470652 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
COL9A1-206ENST00000470652 C6orf118Q5T5N4 469 aa8.73□□□□□ -1.01
COL9A1-206ENST00000470652 C1QTNF2Q9BXJ5 285 aa8.73□□□□□ -1.01
COL9A1-206ENST00000470652 CARD14Q9BXL6 1004 aa8.73□□□□□ -1.01
COL9A1-206ENST00000470652 ZFAND3Q9H8U3 227 aa8.73□□□□□ -1.01
COL9A1-206ENST00000470652 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
COL9A1-206ENST00000470652 ITPKCQ96DU7 683 aa8.72□□□□□ -1.01
COL9A1-206ENST00000470652 NR5A1Q13285 461 aa8.71□□□□□ -1.02
COL9A1-206ENST00000470652 ERFEQ4G0M1 354 aa8.71□□□□□ -1.02
COL9A1-206ENST00000470652 ADAM32Q8TC27 787 aa8.71□□□□□ -1.02
COL9A1-206ENST00000470652 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
COL9A1-206ENST00000470652 ZBBXA8MT70 800 aa8.7□□□□□ -1.02
COL9A1-206ENST00000470652 NR3C2P08235 984 aa8.7□□□□□ -1.02
COL9A1-206ENST00000470652 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
COL9A1-206ENST00000470652 GRM5P41594 1212 aa8.7□□□□□ -1.02
COL9A1-206ENST00000470652 TBC1D2BQ9UPU7 963 aa8.7□□□□□ -1.02
COL9A1-206ENST00000470652 MAP4K5Q9Y4K4 846 aa8.7□□□□□ -1.02
COL9A1-206ENST00000470652 SLC10A4Q96EP9 437 aa8.69□□□□□ -1.02
COL9A1-206ENST00000470652 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
COL9A1-206ENST00000470652 GPR37L1O60883 481 aa8.68□□□□□ -1.02
COL9A1-206ENST00000470652 UPP2O95045 317 aa8.68□□□□□ -1.02
COL9A1-206ENST00000470652 BMP2P12643 396 aa8.68□□□□□ -1.02
COL9A1-206ENST00000470652 VASH1Q7L8A9 365 aaPredicted RBP8.68□□□□□ -1.02
COL9A1-206ENST00000470652 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
COL9A1-206ENST00000470652 FBXO45P0C2W1 286 aa8.67□□□□□ -1.02
COL9A1-206ENST00000470652 NR1H3Q13133 447 aa8.67□□□□□ -1.02
COL9A1-206ENST00000470652 GDPD2Q9HCC8 539 aa8.67□□□□□ -1.02
COL9A1-206ENST00000470652 ZNF330Q9Y3S2 320 aaPredicted RBP8.67□□□□□ -1.02
COL9A1-206ENST00000470652 DZIP3Q86Y13 1208 aaKnown RBP8.66□□□□□ -1.02
COL9A1-206ENST00000470652 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
COL9A1-206ENST00000470652 RAD21O60216 631 aa8.65□□□□□ -1.02
COL9A1-206ENST00000470652 MCCD1P59942 119 aaPredicted RBP8.65□□□□□ -1.02
COL9A1-206ENST00000470652 COG6Q9Y2V7 657 aa8.65□□□□□ -1.02
COL9A1-206ENST00000470652 UBTFP17480 764 aaKnown RBP8.64□□□□□ -1.03
COL9A1-206ENST00000470652 ABL2P42684 1182 aa8.64□□□□□ -1.03
COL9A1-206ENST00000470652 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
COL9A1-206ENST00000470652 LINC00528Q8N1L1 170 aa8.64□□□□□ -1.03
COL9A1-206ENST00000470652 KCTD15Q96SI1 283 aaPredicted RBP8.64□□□□□ -1.03
COL9A1-206ENST00000470652 IRF5Q13568 498 aa8.63□□□□□ -1.03
COL9A1-206ENST00000470652 WASHC4Q2M389 1173 aa8.63□□□□□ -1.03
COL9A1-206ENST00000470652 WWC1Q8IX03 1113 aa8.63□□□□□ -1.03
COL9A1-206ENST00000470652 MEIOBQ8N635 442 aa8.63□□□□□ -1.03
COL9A1-206ENST00000470652 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
COL9A1-206ENST00000470652 FSHRP23945 695 aa8.62□□□□□ -1.03
COL9A1-206ENST00000470652 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
COL9A1-206ENST00000470652 PCDHB9Q9Y5E1 797 aa8.62□□□□□ -1.03
COL9A1-206ENST00000470652 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
COL9A1-206ENST00000470652 EIF4G2P78344 907 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL9A1-206ENST00000470652 DHX9Q08211 1270 aaKnown RBP8.6□□□□□ -1.03
COL9A1-206ENST00000470652 CCDC116Q8IYX3 515 aa8.6□□□□□ -1.03
COL9A1-206ENST00000470652 POM121Q96HA1 1249 aa8.6□□□□□ -1.03
COL9A1-206ENST00000470652 LOC100996750A0A140TA64 210 aa8.59□□□□□ -1.03
COL9A1-206ENST00000470652 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
COL9A1-206ENST00000470652 SEPT12Q8IYM1 358 aa8.59□□□□□ -1.03
COL9A1-206ENST00000470652 KCTD17Q8N5Z5 321 aa8.59□□□□□ -1.03
COL9A1-206ENST00000470652 KRTAP4-6Q9BYQ5 205 aa8.59□□□□□ -1.03
COL9A1-206ENST00000470652 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
COL9A1-206ENST00000470652 ESPNB1AK53 854 aa8.58□□□□□ -1.04
COL9A1-206ENST00000470652 VAC14Q08AM6 782 aa8.58□□□□□ -1.04
COL9A1-206ENST00000470652 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.04
COL9A1-206ENST00000470652 INTS6LQ5JSJ4 861 aaKnown RBP8.58□□□□□ -1.04
COL9A1-206ENST00000470652 CCDC125Q86Z20 511 aa8.58□□□□□ -1.04
COL9A1-206ENST00000470652 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
COL9A1-206ENST00000470652 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
COL9A1-206ENST00000470652 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
COL9A1-206ENST00000470652 FIGNL2A6NMB9 653 aa8.57□□□□□ -1.04
COL9A1-206ENST00000470652 TTLL8A6PVC2 850 aa8.57□□□□□ -1.04
COL9A1-206ENST00000470652 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
COL9A1-206ENST00000470652 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
COL9A1-206ENST00000470652 RNF20Q5VTR2 975 aa8.57□□□□□ -1.04
COL9A1-206ENST00000470652 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
COL9A1-206ENST00000470652 GTF3C3Q9Y5Q9 886 aa8.57□□□□□ -1.04
COL9A1-206ENST00000470652 GIGYF1O75420 1035 aaPredicted RBP8.56□□□□□ -1.04
COL9A1-206ENST00000470652 SOX11P35716 441 aa8.56□□□□□ -1.04
COL9A1-206ENST00000470652 PTSQ03393 145 aa8.56□□□□□ -1.04
COL9A1-206ENST00000470652 PGPEP1Q9NXJ5 209 aa8.56□□□□□ -1.04
COL9A1-206ENST00000470652 GSK3AP49840 483 aa8.55□□□□□ -1.04
COL9A1-206ENST00000470652 KRT76Q01546 638 aa8.55□□□□□ -1.04
COL9A1-206ENST00000470652 TMEM151AQ8N4L1 468 aa8.55□□□□□ -1.04
COL9A1-206ENST00000470652 CEP126Q9P2H0 1117 aa8.55□□□□□ -1.04
COL9A1-206ENST00000470652 RAB15P59190 212 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms