RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
PKDCC-203ENST00000470578 SEPT12Q8IYM1 358 aa22.63■■□□□ 1.21
PKDCC-203ENST00000470578 SPATA31A1Q5TZJ5 1347 aa22.62■■□□□ 1.21
PKDCC-203ENST00000470578 ARHGEF25Q86VW2 580 aa22.62■■□□□ 1.21
PKDCC-203ENST00000470578 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
PKDCC-203ENST00000470578 WNK3Q9BYP7 1800 aa22.61■■□□□ 1.21
PKDCC-203ENST00000470578 LARP1Q6PKG0 1096 aaKnown RBP22.61■■□□□ 1.21
PKDCC-203ENST00000470578 USP35Q9P2H5 1018 aa22.61■■□□□ 1.21
PKDCC-203ENST00000470578 COG3Q96JB2 828 aa22.6■■□□□ 1.21
PKDCC-203ENST00000470578 CRB1P82279 1406 aa22.59■■□□□ 1.21
PKDCC-203ENST00000470578 ONECUT3O60422 494 aaPredicted RBP22.58■■□□□ 1.21
PKDCC-203ENST00000470578 AXIN2Q9Y2T1 843 aa22.56■■□□□ 1.2
PKDCC-203ENST00000470578 PARP4Q9UKK3 1724 aaKnown RBP22.56■■□□□ 1.2
PKDCC-203ENST00000470578 ANKRD26Q9UPS8 1709 aa22.56■■□□□ 1.2
PKDCC-203ENST00000470578 KRT27Q7Z3Y8 459 aa22.55■■□□□ 1.2
PKDCC-203ENST00000470578 TCP11L2Q8N4U5 519 aa22.55■■□□□ 1.2
PKDCC-203ENST00000470578 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
PKDCC-203ENST00000470578 WDR17Q8IZU2 1322 aa22.55■■□□□ 1.2
PKDCC-203ENST00000470578 TOM1L2Q6ZVM7 507 aa22.54■■□□□ 1.2
PKDCC-203ENST00000470578 CCDC125Q86Z20 511 aa22.54■■□□□ 1.2
PKDCC-203ENST00000470578 CARD14Q9BXL6 1004 aa22.54■■□□□ 1.2
PKDCC-203ENST00000470578 FAM208AQ9UK61 1670 aaKnown RBP22.53■■□□□ 1.2
PKDCC-203ENST00000470578 FYB1O15117 783 aa22.53■■□□□ 1.2
PKDCC-203ENST00000470578 CSB-PGBD3P0DP91 1061 aa22.53■■□□□ 1.2
PKDCC-203ENST00000470578 BARGINQ6ZT62 677 aa22.52■■□□□ 1.2
PKDCC-203ENST00000470578 LRRC37A3O60309 1634 aa22.52■■□□□ 1.2
PKDCC-203ENST00000470578 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
PKDCC-203ENST00000470578 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
PKDCC-203ENST00000470578 BLMP54132 1417 aaPredicted RBP22.5■■□□□ 1.19
PKDCC-203ENST00000470578 CGNL1Q0VF96 1302 aa22.5■■□□□ 1.19
PKDCC-203ENST00000470578 ERBB3P21860 1342 aa22.49■■□□□ 1.19
PKDCC-203ENST00000470578 KIF7Q2M1P5 1343 aa22.49■■□□□ 1.19
PKDCC-203ENST00000470578 MAP3K19Q56UN5 1328 aa22.48■■□□□ 1.19
PKDCC-203ENST00000470578 RGPD1P0DJD0 1748 aa22.47■■□□□ 1.19
PKDCC-203ENST00000470578 RTL1A6NKG5 1358 aa22.47■■□□□ 1.19
PKDCC-203ENST00000470578 FBLN1P23142 703 aa22.46■■□□□ 1.19
PKDCC-203ENST00000470578 AMPHP49418 695 aa22.46■■□□□ 1.19
PKDCC-203ENST00000470578 PANK3Q9H999 370 aa22.46■■□□□ 1.19
PKDCC-203ENST00000470578 PEAK1Q9H792 1746 aa22.45■■□□□ 1.19
PKDCC-203ENST00000470578 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
PKDCC-203ENST00000470578 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.18
PKDCC-203ENST00000470578 CARD10Q9BWT7 1032 aa22.45■■□□□ 1.18
PKDCC-203ENST00000470578 CCDC7Q96M83 1385 aa22.45■■□□□ 1.18
PKDCC-203ENST00000470578 RGPD2P0DJD1 1756 aa22.45■■□□□ 1.18
PKDCC-203ENST00000470578 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
PKDCC-203ENST00000470578 FAM182BQ5T319 152 aa22.44■■□□□ 1.18
PKDCC-203ENST00000470578 IP6K1Q92551 441 aa22.44■■□□□ 1.18
PKDCC-203ENST00000470578 HOXC9P31274 260 aa22.43■■□□□ 1.18
PKDCC-203ENST00000470578 PDE3BQ13370 1112 aa22.43■■□□□ 1.18
PKDCC-203ENST00000470578 NLRP2Q9NX02 1062 aa22.43■■□□□ 1.18
PKDCC-203ENST00000470578 TNS1Q9HBL0 1735 aaKnown RBP22.43■■□□□ 1.18
PKDCC-203ENST00000470578 DEFB132Q7Z7B7 95 aa22.42■■□□□ 1.18
PKDCC-203ENST00000470578 LTV1Q96GA3 475 aaPredicted RBP22.42■■□□□ 1.18
PKDCC-203ENST00000470578 DISP2A7MBM2 1401 aa22.41■■□□□ 1.18
PKDCC-203ENST00000470578 SF3B2Q13435 895 aaKnown RBP22.41■■□□□ 1.18
PKDCC-203ENST00000470578 CDCA7Q9BWT1 371 aaPredicted RBP22.4■■□□□ 1.18
PKDCC-203ENST00000470578 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
PKDCC-203ENST00000470578 NSD2O96028 1365 aa22.39■■□□□ 1.18
PKDCC-203ENST00000470578 FLT4P35916 1363 aa22.39■■□□□ 1.18
PKDCC-203ENST00000470578 DDB1Q16531 1140 aa22.38■■□□□ 1.17
PKDCC-203ENST00000470578 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
PKDCC-203ENST00000470578 OVOS2A0A0G2JMS6 1433 aa22.37■■□□□ 1.17
PKDCC-203ENST00000470578 TNS2Q63HR2 1409 aa22.37■■□□□ 1.17
PKDCC-203ENST00000470578 FAM196AQ6ZSG2 479 aa22.36■■□□□ 1.17
PKDCC-203ENST00000470578 KNSTRNQ9Y448 316 aa22.36■■□□□ 1.17
PKDCC-203ENST00000470578 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
PKDCC-203ENST00000470578 SBF2Q86WG5 1849 aa22.35■■□□□ 1.17
PKDCC-203ENST00000470578 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
PKDCC-203ENST00000470578 PPM1GO15355 546 aaPredicted RBP22.34■■□□□ 1.17
PKDCC-203ENST00000470578 TNNT2P45379 298 aaPredicted RBP22.34■■□□□ 1.17
PKDCC-203ENST00000470578 INSRP06213 1382 aa22.34■■□□□ 1.17
PKDCC-203ENST00000470578 IL2RBP14784 551 aa22.33■■□□□ 1.17
PKDCC-203ENST00000470578 HSP90AB2PQ58FF8 381 aa22.32■■□□□ 1.16
PKDCC-203ENST00000470578 TRIM37O94972 964 aa22.3■■□□□ 1.16
PKDCC-203ENST00000470578 EXOC5O00471 708 aa22.29■■□□□ 1.16
PKDCC-203ENST00000470578 BAG6P46379 1132 aa22.29■■□□□ 1.16
PKDCC-203ENST00000470578 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
PKDCC-203ENST00000470578 SHANK3Q9BYB0 1731 aa22.28■■□□□ 1.16
PKDCC-203ENST00000470578 MEGF6O75095 1541 aa22.27■■□□□ 1.16
PKDCC-203ENST00000470578 EN1Q05925 392 aaPredicted RBP22.27■■□□□ 1.16
PKDCC-203ENST00000470578 MARCH10Q8NA82 808 aaPredicted RBP22.27■■□□□ 1.16
PKDCC-203ENST00000470578 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
PKDCC-203ENST00000470578 AMER1Q5JTC6 1135 aaPredicted RBP22.26■■□□□ 1.15
PKDCC-203ENST00000470578 NBPF6Q5VWK0 638 aa22.26■■□□□ 1.15
PKDCC-203ENST00000470578 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
PKDCC-203ENST00000470578 NBPF4Q96M43 638 aa22.26■■□□□ 1.15
PKDCC-203ENST00000470578 NHSQ6T4R5 1651 aa22.24■■□□□ 1.15
PKDCC-203ENST00000470578 BCL9O00512 1426 aa22.23■■□□□ 1.15
PKDCC-203ENST00000470578 RREB1Q92766 1687 aa22.23■■□□□ 1.15
PKDCC-203ENST00000470578 KAT6BQ8WYB5 2073 aa22.22■■□□□ 1.15
PKDCC-203ENST00000470578 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
PKDCC-203ENST00000470578 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
PKDCC-203ENST00000470578 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
PKDCC-203ENST00000470578 APBA3O96018 575 aa22.21■■□□□ 1.15
PKDCC-203ENST00000470578 CC2D1BQ5T0F9 858 aaKnown RBP22.21■■□□□ 1.15
PKDCC-203ENST00000470578 PKD1L3Q7Z443 1732 aa22.2■■□□□ 1.14
PKDCC-203ENST00000470578 DOT1LQ8TEK3 1739 aa22.2■■□□□ 1.14
PKDCC-203ENST00000470578 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.14
PKDCC-203ENST00000470578 EZH2Q15910 746 aaKnown RBP22.19■■□□□ 1.14
PKDCC-203ENST00000470578 NCAPD2Q15021 1401 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms