RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 NME9Q86XW9 330 aa15.02■□□□□ -0
RFTN1-208ENST00000470458 CAMTA1Q9Y6Y1 1673 aa15.02□□□□□ -0.01
RFTN1-208ENST00000470458 WDR17Q8IZU2 1322 aa15.01□□□□□ -0.01
RFTN1-208ENST00000470458 FAM196AQ6ZSG2 479 aa15.01□□□□□ -0.01
RFTN1-208ENST00000470458 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
RFTN1-208ENST00000470458 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
RFTN1-208ENST00000470458 HSPA5P11021 654 aaKnown RBP15□□□□□ -0.01
RFTN1-208ENST00000470458 LARP1Q6PKG0 1096 aaKnown RBP15□□□□□ -0.01
RFTN1-208ENST00000470458 CARD10Q9BWT7 1032 aa15□□□□□ -0.01
RFTN1-208ENST00000470458 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
RFTN1-208ENST00000470458 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
RFTN1-208ENST00000470458 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
RFTN1-208ENST00000470458 BLMP54132 1417 aaPredicted RBP14.99□□□□□ -0.01
RFTN1-208ENST00000470458 SOX12O15370 315 aa14.98□□□□□ -0.01
RFTN1-208ENST00000470458 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
RFTN1-208ENST00000470458 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
RFTN1-208ENST00000470458 COL18A1P39060 1754 aa14.98□□□□□ -0.01
RFTN1-208ENST00000470458 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
RFTN1-208ENST00000470458 NFAT5O94916 1531 aa14.97□□□□□ -0.01
RFTN1-208ENST00000470458 FYB1O15117 783 aa14.97□□□□□ -0.01
RFTN1-208ENST00000470458 IP6K1Q92551 441 aa14.97□□□□□ -0.01
RFTN1-208ENST00000470458 LTN1O94822 1766 aa14.97□□□□□ -0.01
RFTN1-208ENST00000470458 AMPHP49418 695 aa14.96□□□□□ -0.01
RFTN1-208ENST00000470458 POLR3GLQ9BT43 218 aa14.96□□□□□ -0.01
RFTN1-208ENST00000470458 THSD7AQ9UPZ6 1657 aa14.96□□□□□ -0.01
RFTN1-208ENST00000470458 BAG6P46379 1132 aa14.95□□□□□ -0.02
RFTN1-208ENST00000470458 DDB1Q16531 1140 aa14.95□□□□□ -0.02
RFTN1-208ENST00000470458 RTL1A6NKG5 1358 aa14.95□□□□□ -0.02
RFTN1-208ENST00000470458 KIF20BQ96Q89 1820 aa14.94□□□□□ -0.02
RFTN1-208ENST00000470458 AXIN2Q9Y2T1 843 aa14.94□□□□□ -0.02
RFTN1-208ENST00000470458 FAM208AQ9UK61 1670 aaKnown RBP14.93□□□□□ -0.02
RFTN1-208ENST00000470458 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
RFTN1-208ENST00000470458 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
RFTN1-208ENST00000470458 EXOC5O00471 708 aa14.93□□□□□ -0.02
RFTN1-208ENST00000470458 NSD2O96028 1365 aa14.93□□□□□ -0.02
RFTN1-208ENST00000470458 ERBB3P21860 1342 aa14.92□□□□□ -0.02
RFTN1-208ENST00000470458 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
RFTN1-208ENST00000470458 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
RFTN1-208ENST00000470458 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
RFTN1-208ENST00000470458 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
RFTN1-208ENST00000470458 RGPD1P0DJD0 1748 aa14.92□□□□□ -0.02
RFTN1-208ENST00000470458 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
RFTN1-208ENST00000470458 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
RFTN1-208ENST00000470458 KNSTRNQ9Y448 316 aa14.91□□□□□ -0.02
RFTN1-208ENST00000470458 MYOM1P52179 1685 aa14.9□□□□□ -0.02
RFTN1-208ENST00000470458 CARD14Q9BXL6 1004 aa14.9□□□□□ -0.02
RFTN1-208ENST00000470458 PARD3Q8TEW0 1356 aa14.89□□□□□ -0.03
RFTN1-208ENST00000470458 IL2RBP14784 551 aa14.89□□□□□ -0.03
RFTN1-208ENST00000470458 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
RFTN1-208ENST00000470458 HOXC9P31274 260 aa14.89□□□□□ -0.03
RFTN1-208ENST00000470458 PANK3Q9H999 370 aa14.89□□□□□ -0.03
RFTN1-208ENST00000470458 MAP3K19Q56UN5 1328 aa14.89□□□□□ -0.03
RFTN1-208ENST00000470458 FLT4P35916 1363 aa14.88□□□□□ -0.03
RFTN1-208ENST00000470458 OVOS2A0A0G2JMS6 1433 aa14.88□□□□□ -0.03
RFTN1-208ENST00000470458 BCL9O00512 1426 aa14.87□□□□□ -0.03
RFTN1-208ENST00000470458 INSRP06213 1382 aa14.86□□□□□ -0.03
RFTN1-208ENST00000470458 WNK3Q9BYP7 1800 aa14.86□□□□□ -0.03
RFTN1-208ENST00000470458 DISP2A7MBM2 1401 aa14.85□□□□□ -0.03
RFTN1-208ENST00000470458 MAP2P11137 1827 aaKnown RBP14.85□□□□□ -0.03
RFTN1-208ENST00000470458 ANKRD26Q9UPS8 1709 aa14.84□□□□□ -0.03
RFTN1-208ENST00000470458 RAPGEF4Q8WZA2 1011 aa14.84□□□□□ -0.03
RFTN1-208ENST00000470458 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
RFTN1-208ENST00000470458 KAT6BQ8WYB5 2073 aa14.83□□□□□ -0.03
RFTN1-208ENST00000470458 TRIM37O94972 964 aa14.83□□□□□ -0.04
RFTN1-208ENST00000470458 APBA3O96018 575 aa14.83□□□□□ -0.04
RFTN1-208ENST00000470458 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
RFTN1-208ENST00000470458 MORC1Q86VD1 984 aa14.83□□□□□ -0.04
RFTN1-208ENST00000470458 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.04
RFTN1-208ENST00000470458 KIF7Q2M1P5 1343 aa14.83□□□□□ -0.04
RFTN1-208ENST00000470458 WASHC2AQ641Q2 1341 aa14.83□□□□□ -0.04
RFTN1-208ENST00000470458 PLSCR1O15162 318 aa14.81□□□□□ -0.04
RFTN1-208ENST00000470458 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
RFTN1-208ENST00000470458 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
RFTN1-208ENST00000470458 PLEKHG2Q9H7P9 1386 aa14.81□□□□□ -0.04
RFTN1-208ENST00000470458 TNS2Q63HR2 1409 aa14.81□□□□□ -0.04
RFTN1-208ENST00000470458 LRRC37A3O60309 1634 aa14.81□□□□□ -0.04
RFTN1-208ENST00000470458 TATP17735 454 aaPredicted RBP14.8□□□□□ -0.04
RFTN1-208ENST00000470458 ZEB1P37275 1124 aaPredicted RBP14.79□□□□□ -0.04
RFTN1-208ENST00000470458 HSP90AB2PQ58FF8 381 aa14.79□□□□□ -0.04
RFTN1-208ENST00000470458 FAM182BQ5T319 152 aa14.79□□□□□ -0.04
RFTN1-208ENST00000470458 MARCH10Q8NA82 808 aaPredicted RBP14.79□□□□□ -0.04
RFTN1-208ENST00000470458 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
RFTN1-208ENST00000470458 EP400Q96L91 3159 aa14.79□□□□□ -0.04
RFTN1-208ENST00000470458 SBF2Q86WG5 1849 aa14.78□□□□□ -0.04
RFTN1-208ENST00000470458 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
RFTN1-208ENST00000470458 DEFB132Q7Z7B7 95 aa14.78□□□□□ -0.04
RFTN1-208ENST00000470458 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
RFTN1-208ENST00000470458 EN1Q05925 392 aaPredicted RBP14.77□□□□□ -0.05
RFTN1-208ENST00000470458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.77□□□□□ -0.05
RFTN1-208ENST00000470458 RGPD3A6NKT7 1758 aaPredicted RBP14.76□□□□□ -0.05
RFTN1-208ENST00000470458 RGPD4Q7Z3J3 1758 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 PEAK1Q9H792 1746 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 TNS1Q9HBL0 1735 aaKnown RBP14.76□□□□□ -0.05
RFTN1-208ENST00000470458 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 CAMKK2Q96RR4 588 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 SPG7Q9UQ90 795 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 EMILIN1Q9Y6C2 1016 aa14.76□□□□□ -0.05
RFTN1-208ENST00000470458 FBLN1P23142 703 aa14.75□□□□□ -0.05
RFTN1-208ENST00000470458 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms