RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 ZFP42Q96MM3 310 aa9.05□□□□□ -0.96
ITGA6-209ENST00000470259 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
ITGA6-209ENST00000470259 KCTD15Q96SI1 283 aaPredicted RBP9.05□□□□□ -0.96
ITGA6-209ENST00000470259 TRIM34Q9BYJ4 488 aa9.05□□□□□ -0.96
ITGA6-209ENST00000470259 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
ITGA6-209ENST00000470259 UPP2O95045 317 aa9.04□□□□□ -0.96
ITGA6-209ENST00000470259 DZIP3Q86Y13 1208 aaKnown RBP9.04□□□□□ -0.96
ITGA6-209ENST00000470259 OCSTAMPQ9BR26 566 aa9.04□□□□□ -0.96
ITGA6-209ENST00000470259 RAB15P59190 212 aa9.03□□□□□ -0.96
ITGA6-209ENST00000470259 C6orf118Q5T5N4 469 aa9.03□□□□□ -0.96
ITGA6-209ENST00000470259 BANK1Q8NDB2 785 aa9.03□□□□□ -0.96
ITGA6-209ENST00000470259 PGPEP1Q9NXJ5 209 aa9.03□□□□□ -0.96
ITGA6-209ENST00000470259 PPP1R26Q5T8A7 1209 aaPredicted RBP9.02□□□□□ -0.97
ITGA6-209ENST00000470259 BMP2P12643 396 aa9.01□□□□□ -0.97
ITGA6-209ENST00000470259 DHX9Q08211 1270 aaKnown RBP9.01□□□□□ -0.97
ITGA6-209ENST00000470259 NBPF20Q3BBV1 942 aa9.01□□□□□ -0.97
ITGA6-209ENST00000470259 ZBBXA8MT70 800 aa9□□□□□ -0.97
ITGA6-209ENST00000470259 TREML4Q6UXN2 200 aa9□□□□□ -0.97
ITGA6-209ENST00000470259 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
ITGA6-209ENST00000470259 APBB1O00213 710 aa8.99□□□□□ -0.97
ITGA6-209ENST00000470259 WFS1O76024 890 aa8.99□□□□□ -0.97
ITGA6-209ENST00000470259 INTS6LQ5JSJ4 861 aaKnown RBP8.99□□□□□ -0.97
ITGA6-209ENST00000470259 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
ITGA6-209ENST00000470259 PCDHB9Q9Y5E1 797 aa8.99□□□□□ -0.97
ITGA6-209ENST00000470259 LINC00528Q8N1L1 170 aa8.98□□□□□ -0.97
ITGA6-209ENST00000470259 MEIOBQ8N635 442 aa8.98□□□□□ -0.97
ITGA6-209ENST00000470259 TERTO14746 1132 aaKnown RBP8.97□□□□□ -0.97
ITGA6-209ENST00000470259 MAN1A2O60476 641 aa8.97□□□□□ -0.97
ITGA6-209ENST00000470259 CBLBQ13191 982 aa8.97□□□□□ -0.97
ITGA6-209ENST00000470259 TSEN34Q9BSV6 310 aaKnown RBP8.97□□□□□ -0.97
ITGA6-209ENST00000470259 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
ITGA6-209ENST00000470259 SOBPA7XYQ1 873 aa8.96□□□□□ -0.98
ITGA6-209ENST00000470259 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
ITGA6-209ENST00000470259 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
ITGA6-209ENST00000470259 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
ITGA6-209ENST00000470259 TMPRSS4Q9NRS4 437 aa8.95□□□□□ -0.98
ITGA6-209ENST00000470259 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
ITGA6-209ENST00000470259 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
ITGA6-209ENST00000470259 PRM3Q9NNZ6 103 aa8.94□□□□□ -0.98
ITGA6-209ENST00000470259 ZNF330Q9Y3S2 320 aaPredicted RBP8.94□□□□□ -0.98
ITGA6-209ENST00000470259 NR1H3Q13133 447 aa8.93□□□□□ -0.98
ITGA6-209ENST00000470259 ERVH48-1M5A8F1 160 aa8.92□□□□□ -0.98
ITGA6-209ENST00000470259 RELBQ01201 579 aa8.92□□□□□ -0.98
ITGA6-209ENST00000470259 AGBL1Q96MI9 1066 aa8.92□□□□□ -0.98
ITGA6-209ENST00000470259 SOCS7O14512 581 aa8.91□□□□□ -0.98
ITGA6-209ENST00000470259 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
ITGA6-209ENST00000470259 VEGFBP49765 207 aa8.91□□□□□ -0.98
ITGA6-209ENST00000470259 Q6ZVU0 165 aa8.91□□□□□ -0.98
ITGA6-209ENST00000470259 ZNF784Q8NCA9 323 aaPredicted RBP8.91□□□□□ -0.98
ITGA6-209ENST00000470259 FIGNL2A6NMB9 653 aa8.9□□□□□ -0.98
ITGA6-209ENST00000470259 ESPNB1AK53 854 aa8.9□□□□□ -0.98
ITGA6-209ENST00000470259 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
ITGA6-209ENST00000470259 ZNF592Q92610 1267 aa8.9□□□□□ -0.98
ITGA6-209ENST00000470259 TRIM52Q96A61 297 aa8.9□□□□□ -0.98
ITGA6-209ENST00000470259 SOS2Q07890 1332 aaPredicted RBP8.89□□□□□ -0.99
ITGA6-209ENST00000470259 TTLL8A6PVC2 850 aa8.89□□□□□ -0.99
ITGA6-209ENST00000470259 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
ITGA6-209ENST00000470259 LCE2AQ5TA79 106 aaPredicted RBP8.89□□□□□ -0.99
ITGA6-209ENST00000470259 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
ITGA6-209ENST00000470259 TBC1D2BQ9UPU7 963 aa8.89□□□□□ -0.99
ITGA6-209ENST00000470259 RNF20Q5VTR2 975 aa8.88□□□□□ -0.99
ITGA6-209ENST00000470259 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
ITGA6-209ENST00000470259 DNMT3LQ9UJW3 386 aa8.88□□□□□ -0.99
ITGA6-209ENST00000470259 SPINT1O43278 529 aa8.87□□□□□ -0.99
ITGA6-209ENST00000470259 NPAS3Q8IXF0 933 aa8.87□□□□□ -0.99
ITGA6-209ENST00000470259 POLMQ9NP87 494 aaPredicted RBP8.87□□□□□ -0.99
ITGA6-209ENST00000470259 ADH1AP07327 375 aa8.86□□□□□ -0.99
ITGA6-209ENST00000470259 ADD1P35611 737 aaKnown RBP8.86□□□□□ -0.99
ITGA6-209ENST00000470259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.99
ITGA6-209ENST00000470259 IRF7Q92985 503 aa8.86□□□□□ -0.99
ITGA6-209ENST00000470259 INSM2Q96T92 566 aaPredicted RBP8.86□□□□□ -0.99
ITGA6-209ENST00000470259 ESF1Q9H501 851 aaKnown RBP8.86□□□□□ -0.99
ITGA6-209ENST00000470259 H3BM21 787 aa8.85□□□□□ -0.99
ITGA6-209ENST00000470259 GPR37L1O60883 481 aa8.85□□□□□ -0.99
ITGA6-209ENST00000470259 LILRA1O75019 489 aa8.85□□□□□ -0.99
ITGA6-209ENST00000470259 ABL2P42684 1182 aa8.84□□□□□ -0.99
ITGA6-209ENST00000470259 CTSOP43234 321 aaPredicted RBP8.84□□□□□ -0.99
ITGA6-209ENST00000470259 CCDC125Q86Z20 511 aa8.84□□□□□ -0.99
ITGA6-209ENST00000470259 PTGIRP43119 386 aa8.83□□□□□ -1
ITGA6-209ENST00000470259 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
ITGA6-209ENST00000470259 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
ITGA6-209ENST00000470259 PCDHB11Q9Y5F2 797 aa8.83□□□□□ -1
ITGA6-209ENST00000470259 LCE2CQ5TA81 110 aa8.82□□□□□ -1
ITGA6-209ENST00000470259 PPFIA3O75145 1194 aa8.81□□□□□ -1
ITGA6-209ENST00000470259 CC2D2BQ6DHV5 1058 aa8.81□□□□□ -1
ITGA6-209ENST00000470259 ATP5J2-PTCD1G3V325 749 aa8.8□□□□□ -1
ITGA6-209ENST00000470259 WIPF1O43516 503 aa8.8□□□□□ -1
ITGA6-209ENST00000470259 GMPRP36959 345 aa8.8□□□□□ -1
ITGA6-209ENST00000470259 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
ITGA6-209ENST00000470259 PTSQ03393 145 aa8.8□□□□□ -1
ITGA6-209ENST00000470259 CEP126Q9P2H0 1117 aa8.8□□□□□ -1
ITGA6-209ENST00000470259 ERBB4Q15303 1308 aa8.8□□□□□ -1
ITGA6-209ENST00000470259 MEN1O00255 615 aa8.79□□□□□ -1
ITGA6-209ENST00000470259 VAC14Q08AM6 782 aa8.79□□□□□ -1
ITGA6-209ENST00000470259 IRF5Q13568 498 aa8.79□□□□□ -1
ITGA6-209ENST00000470259 MCM6Q14566 821 aa8.79□□□□□ -1
ITGA6-209ENST00000470259 ERVK-9P63128 1117 aa8.78□□□□□ -1
ITGA6-209ENST00000470259 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
ITGA6-209ENST00000470259 RNF217Q8TC41 542 aa8.78□□□□□ -1
ITGA6-209ENST00000470259 SCTRP47872 440 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms