RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
SYNGAP1-205ENST00000470232 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
SYNGAP1-205ENST00000470232 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
SYNGAP1-205ENST00000470232 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
SYNGAP1-205ENST00000470232 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
SYNGAP1-205ENST00000470232 PROM2Q8N271 834 aa13.03□□□□□ -0.32
SYNGAP1-205ENST00000470232 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-205ENST00000470232 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 KCNA4P22459 653 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 GPR162Q16538 588 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 ARXQ96QS3 562 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 USP19O94966 1318 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
SYNGAP1-205ENST00000470232 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
SYNGAP1-205ENST00000470232 MYOM1P52179 1685 aa13.01□□□□□ -0.33
SYNGAP1-205ENST00000470232 LMO7Q8WWI1 1683 aa13.01□□□□□ -0.33
SYNGAP1-205ENST00000470232 BCL9O00512 1426 aa13□□□□□ -0.33
SYNGAP1-205ENST00000470232 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
SYNGAP1-205ENST00000470232 EXOC5O00471 708 aa13□□□□□ -0.33
SYNGAP1-205ENST00000470232 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
SYNGAP1-205ENST00000470232 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
SYNGAP1-205ENST00000470232 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-205ENST00000470232 NLRP6P59044 892 aa12.98□□□□□ -0.33
SYNGAP1-205ENST00000470232 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
SYNGAP1-205ENST00000470232 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
SYNGAP1-205ENST00000470232 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
SYNGAP1-205ENST00000470232 CEP350Q5VT06 3117 aa12.96□□□□□ -0.33
SYNGAP1-205ENST00000470232 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
SYNGAP1-205ENST00000470232 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
SYNGAP1-205ENST00000470232 POLD1P28340 1107 aa12.95□□□□□ -0.34
SYNGAP1-205ENST00000470232 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-205ENST00000470232 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
SYNGAP1-205ENST00000470232 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-205ENST00000470232 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
SYNGAP1-205ENST00000470232 LRRC37A3O60309 1634 aa12.94□□□□□ -0.34
SYNGAP1-205ENST00000470232 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
SYNGAP1-205ENST00000470232 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
SYNGAP1-205ENST00000470232 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
SYNGAP1-205ENST00000470232 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-205ENST00000470232 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
SYNGAP1-205ENST00000470232 PPIP5K1Q6PFW1 1433 aa12.92□□□□□ -0.34
SYNGAP1-205ENST00000470232 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
SYNGAP1-205ENST00000470232 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
SYNGAP1-205ENST00000470232 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
SYNGAP1-205ENST00000470232 GOLGB1Q14789 3259 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-205ENST00000470232 TRIM26Q12899 539 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-205ENST00000470232 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
SYNGAP1-205ENST00000470232 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
SYNGAP1-205ENST00000470232 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
SYNGAP1-205ENST00000470232 CABP1Q9NZU7 370 aa12.89□□□□□ -0.35
SYNGAP1-205ENST00000470232 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
SYNGAP1-205ENST00000470232 SLIT3O75094 1523 aa12.88□□□□□ -0.35
SYNGAP1-205ENST00000470232 SLC27A3Q5K4L6 730 aa12.87□□□□□ -0.35
SYNGAP1-205ENST00000470232 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
SYNGAP1-205ENST00000470232 KAT6BQ8WYB5 2073 aa12.87□□□□□ -0.35
SYNGAP1-205ENST00000470232 USP6P35125 1406 aa12.87□□□□□ -0.35
SYNGAP1-205ENST00000470232 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
SYNGAP1-205ENST00000470232 CENPJQ9HC77 1338 aaPredicted RBP12.87□□□□□ -0.35
SYNGAP1-205ENST00000470232 COL18A1P39060 1754 aa12.86□□□□□ -0.35
SYNGAP1-205ENST00000470232 ZNF827Q17R98 1081 aa12.85□□□□□ -0.35
SYNGAP1-205ENST00000470232 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
SYNGAP1-205ENST00000470232 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
SYNGAP1-205ENST00000470232 SOX12O15370 315 aa12.84□□□□□ -0.35
SYNGAP1-205ENST00000470232 HSPA6P17066 643 aa12.84□□□□□ -0.35
SYNGAP1-205ENST00000470232 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
SYNGAP1-205ENST00000470232 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-205ENST00000470232 NHSQ6T4R5 1651 aa12.83□□□□□ -0.35
SYNGAP1-205ENST00000470232 IL2RBP14784 551 aa12.83□□□□□ -0.36
SYNGAP1-205ENST00000470232 LRRC4BQ9NT99 713 aa12.83□□□□□ -0.36
SYNGAP1-205ENST00000470232 NLRP2Q9NX02 1062 aa12.83□□□□□ -0.36
SYNGAP1-205ENST00000470232 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
SYNGAP1-205ENST00000470232 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.36
SYNGAP1-205ENST00000470232 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-205ENST00000470232 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
SYNGAP1-205ENST00000470232 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
SYNGAP1-205ENST00000470232 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
SYNGAP1-205ENST00000470232 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
SYNGAP1-205ENST00000470232 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
SYNGAP1-205ENST00000470232 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
SYNGAP1-205ENST00000470232 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
SYNGAP1-205ENST00000470232 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
SYNGAP1-205ENST00000470232 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
SYNGAP1-205ENST00000470232 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
SYNGAP1-205ENST00000470232 ATP10DQ9P241 1426 aa12.79□□□□□ -0.36
SYNGAP1-205ENST00000470232 BTAF1O14981 1849 aa12.79□□□□□ -0.36
SYNGAP1-205ENST00000470232 ABCC6O95255 1503 aa12.79□□□□□ -0.36
SYNGAP1-205ENST00000470232 YBX3P16989 372 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYNGAP1-205ENST00000470232 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
SYNGAP1-205ENST00000470232 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
SYNGAP1-205ENST00000470232 QRICH2Q9H0J4 1663 aa12.78□□□□□ -0.36
SYNGAP1-205ENST00000470232 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
SYNGAP1-205ENST00000470232 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
SYNGAP1-205ENST00000470232 ERBB3P21860 1342 aa12.77□□□□□ -0.37
SYNGAP1-205ENST00000470232 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
SYNGAP1-205ENST00000470232 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
SYNGAP1-205ENST00000470232 RNF39Q9H2S5 420 aa12.76□□□□□ -0.37
SYNGAP1-205ENST00000470232 KTN1Q86UP2 1357 aaKnown RBP12.75□□□□□ -0.37
SYNGAP1-205ENST00000470232 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms