RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
COL11A1-208ENST00000470170 CCDC116Q8IYX3 515 aa12.41□□□□□ -0.42
COL11A1-208ENST00000470170 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
COL11A1-208ENST00000470170 KCTD15Q96SI1 283 aaPredicted RBP12.4□□□□□ -0.42
COL11A1-208ENST00000470170 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
COL11A1-208ENST00000470170 CDV3Q9UKY7 258 aaKnown RBP12.38□□□□□ -0.43
COL11A1-208ENST00000470170 SCARF1Q14162 830 aa12.37□□□□□ -0.43
COL11A1-208ENST00000470170 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
COL11A1-208ENST00000470170 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
COL11A1-208ENST00000470170 PPP1R26Q5T8A7 1209 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-208ENST00000470170 SNRKQ9NRH2 765 aa12.36□□□□□ -0.43
COL11A1-208ENST00000470170 INTS6LQ5JSJ4 861 aaKnown RBP12.35□□□□□ -0.43
COL11A1-208ENST00000470170 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
COL11A1-208ENST00000470170 MEIOBQ8N635 442 aa12.35□□□□□ -0.43
COL11A1-208ENST00000470170 TREML4Q6UXN2 200 aa12.34□□□□□ -0.43
COL11A1-208ENST00000470170 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
COL11A1-208ENST00000470170 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
COL11A1-208ENST00000470170 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
COL11A1-208ENST00000470170 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
COL11A1-208ENST00000470170 RAB15P59190 212 aa12.32□□□□□ -0.44
COL11A1-208ENST00000470170 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
COL11A1-208ENST00000470170 GPR37L1O60883 481 aa12.31□□□□□ -0.44
COL11A1-208ENST00000470170 BMP2P12643 396 aa12.31□□□□□ -0.44
COL11A1-208ENST00000470170 NFX1Q12986 1120 aaKnown RBP12.31□□□□□ -0.44
COL11A1-208ENST00000470170 CBLBQ13191 982 aa12.31□□□□□ -0.44
COL11A1-208ENST00000470170 LCE2AQ5TA79 106 aaPredicted RBP12.31□□□□□ -0.44
COL11A1-208ENST00000470170 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
COL11A1-208ENST00000470170 SOBPA7XYQ1 873 aa12.3□□□□□ -0.44
COL11A1-208ENST00000470170 UPP2O95045 317 aa12.3□□□□□ -0.44
COL11A1-208ENST00000470170 SOCS7O14512 581 aa12.29□□□□□ -0.44
COL11A1-208ENST00000470170 WFS1O76024 890 aa12.29□□□□□ -0.44
COL11A1-208ENST00000470170 DHX9Q08211 1270 aaKnown RBP12.29□□□□□ -0.44
COL11A1-208ENST00000470170 NDUFB9Q9Y6M9 179 aa12.29□□□□□ -0.44
COL11A1-208ENST00000470170 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
COL11A1-208ENST00000470170 TMPRSS4Q9NRS4 437 aa12.28□□□□□ -0.44
COL11A1-208ENST00000470170 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
COL11A1-208ENST00000470170 Q6ZVU0 165 aa12.26□□□□□ -0.45
COL11A1-208ENST00000470170 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
COL11A1-208ENST00000470170 ESPNB1AK53 854 aa12.25□□□□□ -0.45
COL11A1-208ENST00000470170 ERVH48-1M5A8F1 160 aa12.25□□□□□ -0.45
COL11A1-208ENST00000470170 LCE2CQ5TA81 110 aa12.25□□□□□ -0.45
COL11A1-208ENST00000470170 ZNF784Q8NCA9 323 aaPredicted RBP12.25□□□□□ -0.45
COL11A1-208ENST00000470170 APBB1O00213 710 aa12.24□□□□□ -0.45
COL11A1-208ENST00000470170 NR1H3Q13133 447 aa12.24□□□□□ -0.45
COL11A1-208ENST00000470170 NXF1Q9UBU9 619 aaKnown RBP12.24□□□□□ -0.45
COL11A1-208ENST00000470170 MAN1A2O60476 641 aa12.23□□□□□ -0.45
COL11A1-208ENST00000470170 VEGFBP49765 207 aa12.23□□□□□ -0.45
COL11A1-208ENST00000470170 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
COL11A1-208ENST00000470170 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-208ENST00000470170 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
COL11A1-208ENST00000470170 SOS2Q07890 1332 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-208ENST00000470170 RELBQ01201 579 aa12.2□□□□□ -0.46
COL11A1-208ENST00000470170 DNMT3LQ9UJW3 386 aa12.2□□□□□ -0.46
COL11A1-208ENST00000470170 LILRA1O75019 489 aa12.19□□□□□ -0.46
COL11A1-208ENST00000470170 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
COL11A1-208ENST00000470170 SPINT1O43278 529 aa12.18□□□□□ -0.46
COL11A1-208ENST00000470170 ADD1P35611 737 aaKnown RBP12.18□□□□□ -0.46
COL11A1-208ENST00000470170 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
COL11A1-208ENST00000470170 TTLL8A6PVC2 850 aa12.17□□□□□ -0.46
COL11A1-208ENST00000470170 SLC16A10Q8TF71 515 aa12.17□□□□□ -0.46
COL11A1-208ENST00000470170 ZNF395Q9H8N7 513 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-208ENST00000470170 ZNF330Q9Y3S2 320 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-208ENST00000470170 H3BM21 787 aa12.15□□□□□ -0.46
COL11A1-208ENST00000470170 ADH1AP07327 375 aa12.15□□□□□ -0.46
COL11A1-208ENST00000470170 NPAS3Q8IXF0 933 aa12.15□□□□□ -0.46
COL11A1-208ENST00000470170 FIGNL2A6NMB9 653 aa12.14□□□□□ -0.47
COL11A1-208ENST00000470170 INSM2Q96T92 566 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-208ENST00000470170 CTSOP43234 321 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-208ENST00000470170 IRF5Q13568 498 aa12.13□□□□□ -0.47
COL11A1-208ENST00000470170 KDF1Q8NAX2 398 aaPredicted RBP12.13□□□□□ -0.47
COL11A1-208ENST00000470170 PRM3Q9NNZ6 103 aa12.13□□□□□ -0.47
COL11A1-208ENST00000470170 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-208ENST00000470170 MCM6Q14566 821 aa12.12□□□□□ -0.47
COL11A1-208ENST00000470170 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
COL11A1-208ENST00000470170 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.11□□□□□ -0.47
COL11A1-208ENST00000470170 RNF20Q5VTR2 975 aa12.11□□□□□ -0.47
COL11A1-208ENST00000470170 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
COL11A1-208ENST00000470170 IRF7Q92985 503 aa12.11□□□□□ -0.47
COL11A1-208ENST00000470170 POLMQ9NP87 494 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-208ENST00000470170 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
COL11A1-208ENST00000470170 WIPF1O43516 503 aa12.1□□□□□ -0.47
COL11A1-208ENST00000470170 PTGIRP43119 386 aa12.1□□□□□ -0.47
COL11A1-208ENST00000470170 ABL2P42684 1182 aa12.09□□□□□ -0.47
COL11A1-208ENST00000470170 PCDHB11Q9Y5F2 797 aa12.09□□□□□ -0.47
COL11A1-208ENST00000470170 GMPRP36959 345 aa12.08□□□□□ -0.48
COL11A1-208ENST00000470170 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 SCTRP47872 440 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 ERVK-9P63128 1117 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 PTSQ03393 145 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 VAC14Q08AM6 782 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 RNF217Q8TC41 542 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
COL11A1-208ENST00000470170 FOXD4L5Q5VV16 416 aaPredicted RBP12.06□□□□□ -0.48
COL11A1-208ENST00000470170 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
COL11A1-208ENST00000470170 CCDC125Q86Z20 511 aa12.06□□□□□ -0.48
COL11A1-208ENST00000470170 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
COL11A1-208ENST00000470170 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
COL11A1-208ENST00000470170 EIF4G2P78344 907 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL11A1-208ENST00000470170 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
COL11A1-208ENST00000470170 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms