RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 USP6P35125 1406 aa13.87□□□□□ -0.19
NUP98-209ENST00000469881 MYOM1P52179 1685 aa13.86□□□□□ -0.19
NUP98-209ENST00000469881 GCP02774 474 aa13.85□□□□□ -0.19
NUP98-209ENST00000469881 AATKQ6ZMQ8 1374 aa13.84□□□□□ -0.19
NUP98-209ENST00000469881 SPON1Q9HCB6 807 aa13.84□□□□□ -0.19
NUP98-209ENST00000469881 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
NUP98-209ENST00000469881 MON2Q7Z3U7 1717 aa13.84□□□□□ -0.19
NUP98-209ENST00000469881 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
NUP98-209ENST00000469881 NHSQ6T4R5 1651 aa13.83□□□□□ -0.2
NUP98-209ENST00000469881 USP54Q70EL1 1684 aa13.83□□□□□ -0.2
NUP98-209ENST00000469881 YY1P25490 414 aa13.83□□□□□ -0.2
NUP98-209ENST00000469881 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
NUP98-209ENST00000469881 ABCC6O95255 1503 aa13.83□□□□□ -0.2
NUP98-209ENST00000469881 KCNQ2O43526 872 aa13.82□□□□□ -0.2
NUP98-209ENST00000469881 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
NUP98-209ENST00000469881 BCL9O00512 1426 aa13.81□□□□□ -0.2
NUP98-209ENST00000469881 LTN1O94822 1766 aa13.81□□□□□ -0.2
NUP98-209ENST00000469881 CHD4Q14839 1912 aa13.8□□□□□ -0.2
NUP98-209ENST00000469881 PLSCR1O15162 318 aa13.8□□□□□ -0.2
NUP98-209ENST00000469881 DDB1Q16531 1140 aa13.8□□□□□ -0.2
NUP98-209ENST00000469881 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
NUP98-209ENST00000469881 NFAT5O94916 1531 aa13.8□□□□□ -0.2
NUP98-209ENST00000469881 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
NUP98-209ENST00000469881 WDR17Q8IZU2 1322 aa13.79□□□□□ -0.2
NUP98-209ENST00000469881 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
NUP98-209ENST00000469881 ZBTB7CA1YPR0 619 aa13.78□□□□□ -0.2
NUP98-209ENST00000469881 DCAF8L1A6NGE4 600 aa13.78□□□□□ -0.2
NUP98-209ENST00000469881 NLRP6P59044 892 aa13.78□□□□□ -0.2
NUP98-209ENST00000469881 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
NUP98-209ENST00000469881 BTAF1O14981 1849 aa13.77□□□□□ -0.21
NUP98-209ENST00000469881 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
NUP98-209ENST00000469881 TOM1L2Q6ZVM7 507 aa13.77□□□□□ -0.21
NUP98-209ENST00000469881 CDCA7Q9BWT1 371 aaPredicted RBP13.77□□□□□ -0.21
NUP98-209ENST00000469881 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
NUP98-209ENST00000469881 QSER1Q2KHR3 1735 aa13.76□□□□□ -0.21
NUP98-209ENST00000469881 CABP1Q9NZU7 370 aa13.76□□□□□ -0.21
NUP98-209ENST00000469881 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
NUP98-209ENST00000469881 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
NUP98-209ENST00000469881 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
NUP98-209ENST00000469881 PTF1AQ7RTS3 328 aa13.73□□□□□ -0.21
NUP98-209ENST00000469881 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
NUP98-209ENST00000469881 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
NUP98-209ENST00000469881 KCNH5Q8NCM2 988 aa13.73□□□□□ -0.21
NUP98-209ENST00000469881 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
NUP98-209ENST00000469881 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
NUP98-209ENST00000469881 COL24A1Q17RW2 1714 aa13.72□□□□□ -0.21
NUP98-209ENST00000469881 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.21
NUP98-209ENST00000469881 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
NUP98-209ENST00000469881 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
NUP98-209ENST00000469881 PROM2Q8N271 834 aa13.71□□□□□ -0.21
NUP98-209ENST00000469881 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.21
NUP98-209ENST00000469881 PDGFDQ9GZP0 370 aaPredicted RBP13.71□□□□□ -0.21
NUP98-209ENST00000469881 ZBTB7AO95365 584 aa13.7□□□□□ -0.22
NUP98-209ENST00000469881 PTGER2P43116 358 aa13.7□□□□□ -0.22
NUP98-209ENST00000469881 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
NUP98-209ENST00000469881 STK32BQ9NY57 414 aa13.7□□□□□ -0.22
NUP98-209ENST00000469881 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
NUP98-209ENST00000469881 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
NUP98-209ENST00000469881 DOT1LQ8TEK3 1739 aa13.68□□□□□ -0.22
NUP98-209ENST00000469881 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
NUP98-209ENST00000469881 ROCK2O75116 1388 aaKnown RBP13.68□□□□□ -0.22
NUP98-209ENST00000469881 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
NUP98-209ENST00000469881 EXOC5O00471 708 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 SOX12O15370 315 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 MTFR1LQ9H019 292 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 LY75O60449 1722 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
NUP98-209ENST00000469881 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
NUP98-209ENST00000469881 CD163L1Q9NR16 1453 aa13.66□□□□□ -0.22
NUP98-209ENST00000469881 ERBB3P21860 1342 aa13.65□□□□□ -0.22
NUP98-209ENST00000469881 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
NUP98-209ENST00000469881 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
NUP98-209ENST00000469881 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
NUP98-209ENST00000469881 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
NUP98-209ENST00000469881 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
NUP98-209ENST00000469881 RGPD2P0DJD1 1756 aa13.63□□□□□ -0.23
NUP98-209ENST00000469881 ZNF784Q8NCA9 323 aaPredicted RBP13.63□□□□□ -0.23
NUP98-209ENST00000469881 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
NUP98-209ENST00000469881 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
NUP98-209ENST00000469881 IL2RBP14784 551 aa13.61□□□□□ -0.23
NUP98-209ENST00000469881 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
NUP98-209ENST00000469881 NLRP2Q9NX02 1062 aa13.6□□□□□ -0.23
NUP98-209ENST00000469881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.23
NUP98-209ENST00000469881 ARXQ96QS3 562 aa13.59□□□□□ -0.23
NUP98-209ENST00000469881 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
NUP98-209ENST00000469881 ZNF827Q17R98 1081 aa13.58□□□□□ -0.24
NUP98-209ENST00000469881 NME9Q86XW9 330 aa13.58□□□□□ -0.24
NUP98-209ENST00000469881 C5P01031 1676 aa13.58□□□□□ -0.24
NUP98-209ENST00000469881 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
NUP98-209ENST00000469881 UTRNP46939 3433 aa13.57□□□□□ -0.24
NUP98-209ENST00000469881 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
NUP98-209ENST00000469881 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
NUP98-209ENST00000469881 LRRC4BQ9NT99 713 aa13.56□□□□□ -0.24
NUP98-209ENST00000469881 HDGFL2Q7Z4V5 671 aaPredicted RBP13.55□□□□□ -0.24
NUP98-209ENST00000469881 SIN3AQ96ST3 1273 aa13.55□□□□□ -0.24
NUP98-209ENST00000469881 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
NUP98-209ENST00000469881 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
NUP98-209ENST00000469881 SLC16A10Q8TF71 515 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms