RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 DEFB132Q7Z7B7 95 aa24.49■■□□□ 1.51
MRPL28-208ENST00000469744 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
MRPL28-208ENST00000469744 BARGINQ6ZT62 677 aa24.48■■□□□ 1.51
MRPL28-208ENST00000469744 USP31Q70CQ4 1352 aa24.48■■□□□ 1.51
MRPL28-208ENST00000469744 CRB1P82279 1406 aa24.48■■□□□ 1.51
MRPL28-208ENST00000469744 TMF1P82094 1093 aa24.47■■□□□ 1.51
MRPL28-208ENST00000469744 NINLQ9Y2I6 1382 aa24.46■■□□□ 1.51
MRPL28-208ENST00000469744 SF3B2Q13435 895 aaKnown RBP24.46■■□□□ 1.51
MRPL28-208ENST00000469744 LTN1O94822 1766 aa24.46■■□□□ 1.51
MRPL28-208ENST00000469744 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
MRPL28-208ENST00000469744 TOM1L2Q6ZVM7 507 aa24.44■■□□□ 1.5
MRPL28-208ENST00000469744 RGPD1P0DJD0 1748 aa24.43■■□□□ 1.5
MRPL28-208ENST00000469744 PARP4Q9UKK3 1724 aaKnown RBP24.43■■□□□ 1.5
MRPL28-208ENST00000469744 OVOS2A0A0J9YW53 1432 aa24.42■■□□□ 1.5
MRPL28-208ENST00000469744 OVOS2Q6IE36 1432 aa24.42■■□□□ 1.5
MRPL28-208ENST00000469744 WDR17Q8IZU2 1322 aa24.42■■□□□ 1.5
MRPL28-208ENST00000469744 THRAP3Q9Y2W1 955 aaKnown RBP24.42■■□□□ 1.5
MRPL28-208ENST00000469744 WNK3Q9BYP7 1800 aa24.41■■□□□ 1.5
MRPL28-208ENST00000469744 ANKRD36BQ8N2N9 1353 aa24.41■■□□□ 1.5
MRPL28-208ENST00000469744 TNS1Q9HBL0 1735 aaKnown RBP24.41■■□□□ 1.5
MRPL28-208ENST00000469744 CSB-PGBD3P0DP91 1061 aa24.4■■□□□ 1.5
MRPL28-208ENST00000469744 PDE3BQ13370 1112 aa24.4■■□□□ 1.5
MRPL28-208ENST00000469744 LRRC37A3O60309 1634 aa24.39■■□□□ 1.49
MRPL28-208ENST00000469744 MYOM1P52179 1685 aa24.38■■□□□ 1.49
MRPL28-208ENST00000469744 ABCC6O95255 1503 aa24.38■■□□□ 1.49
MRPL28-208ENST00000469744 TRIM37O94972 964 aa24.36■■□□□ 1.49
MRPL28-208ENST00000469744 BAG6P46379 1132 aa24.36■■□□□ 1.49
MRPL28-208ENST00000469744 FAM196AQ6ZSG2 479 aa24.36■■□□□ 1.49
MRPL28-208ENST00000469744 SRCAPQ6ZRS2 3230 aa24.35■■□□□ 1.49
MRPL28-208ENST00000469744 CDCA8Q53HL2 280 aa24.34■■□□□ 1.49
MRPL28-208ENST00000469744 EN1Q05925 392 aaPredicted RBP24.33■■□□□ 1.49
MRPL28-208ENST00000469744 COG3Q96JB2 828 aa24.33■■□□□ 1.49
MRPL28-208ENST00000469744 FBLN1P23142 703 aa24.32■■□□□ 1.48
MRPL28-208ENST00000469744 MIER1Q8N108 512 aa24.32■■□□□ 1.48
MRPL28-208ENST00000469744 CARD10Q9BWT7 1032 aa24.32■■□□□ 1.48
MRPL28-208ENST00000469744 ERBB3P21860 1342 aa24.31■■□□□ 1.48
MRPL28-208ENST00000469744 DDB1Q16531 1140 aa24.31■■□□□ 1.48
MRPL28-208ENST00000469744 GGNBP2Q9H3C7 697 aa24.31■■□□□ 1.48
MRPL28-208ENST00000469744 KIF20BQ96Q89 1820 aa24.31■■□□□ 1.48
MRPL28-208ENST00000469744 PEAK1Q9H792 1746 aa24.3■■□□□ 1.48
MRPL28-208ENST00000469744 DISP2A7MBM2 1401 aa24.29■■□□□ 1.48
MRPL28-208ENST00000469744 ANKRD24Q8TF21 1146 aa24.29■■□□□ 1.48
MRPL28-208ENST00000469744 POLR3GLQ9BT43 218 aa24.29■■□□□ 1.48
MRPL28-208ENST00000469744 NLRP2Q9NX02 1062 aa24.29■■□□□ 1.48
MRPL28-208ENST00000469744 FYB1O15117 783 aa24.28■■□□□ 1.48
MRPL28-208ENST00000469744 HSPA5P11021 654 aaKnown RBP24.28■■□□□ 1.48
MRPL28-208ENST00000469744 MAP3K19Q56UN5 1328 aa24.27■■□□□ 1.48
MRPL28-208ENST00000469744 CCDC7Q96M83 1385 aa24.27■■□□□ 1.48
MRPL28-208ENST00000469744 OVOS2A0A0G2JMS6 1433 aa24.27■■□□□ 1.48
MRPL28-208ENST00000469744 APBA3O96018 575 aa24.26■■□□□ 1.47
MRPL28-208ENST00000469744 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
MRPL28-208ENST00000469744 CARD14Q9BXL6 1004 aa24.26■■□□□ 1.47
MRPL28-208ENST00000469744 SBF2Q86WG5 1849 aa24.26■■□□□ 1.47
MRPL28-208ENST00000469744 EZH2Q15910 746 aaKnown RBP24.26■■□□□ 1.47
MRPL28-208ENST00000469744 LTV1Q96GA3 475 aaPredicted RBP24.26■■□□□ 1.47
MRPL28-208ENST00000469744 NSD3Q9BZ95 1437 aa24.25■■□□□ 1.47
MRPL28-208ENST00000469744 IP6K1Q92551 441 aa24.25■■□□□ 1.47
MRPL28-208ENST00000469744 CDCA7Q9BWT1 371 aaPredicted RBP24.25■■□□□ 1.47
MRPL28-208ENST00000469744 MARCH10Q8NA82 808 aaPredicted RBP24.24■■□□□ 1.47
MRPL28-208ENST00000469744 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
MRPL28-208ENST00000469744 RRS1Q15050 365 aaKnown RBP24.23■■□□□ 1.47
MRPL28-208ENST00000469744 HOXC9P31274 260 aa24.22■■□□□ 1.47
MRPL28-208ENST00000469744 AMPHP49418 695 aa24.22■■□□□ 1.47
MRPL28-208ENST00000469744 RGPD2P0DJD1 1756 aa24.22■■□□□ 1.47
MRPL28-208ENST00000469744 PSDA5PKW4 1024 aaPredicted RBP24.21■■□□□ 1.47
MRPL28-208ENST00000469744 CAMKK2Q96RR4 588 aa24.21■■□□□ 1.47
MRPL28-208ENST00000469744 TNS2Q63HR2 1409 aa24.21■■□□□ 1.47
MRPL28-208ENST00000469744 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
MRPL28-208ENST00000469744 EXOC5O00471 708 aa24.19■■□□□ 1.46
MRPL28-208ENST00000469744 PTF1AQ7RTS3 328 aa24.19■■□□□ 1.46
MRPL28-208ENST00000469744 RREB1Q92766 1687 aa24.18■■□□□ 1.46
MRPL28-208ENST00000469744 IL2RBP14784 551 aa24.18■■□□□ 1.46
MRPL28-208ENST00000469744 NUP188Q5SRE5 1749 aa24.16■■□□□ 1.46
MRPL28-208ENST00000469744 C11orf95C9JLR9 678 aaPredicted RBP24.16■■□□□ 1.46
MRPL28-208ENST00000469744 RTL1A6NKG5 1358 aa24.16■■□□□ 1.46
MRPL28-208ENST00000469744 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.46
MRPL28-208ENST00000469744 R3HDM1Q15032 1099 aaKnown RBP24.13■■□□□ 1.45
MRPL28-208ENST00000469744 BCL9O00512 1426 aa24.12■■□□□ 1.45
MRPL28-208ENST00000469744 BCL11BQ9C0K0 894 aaPredicted RBP24.12■■□□□ 1.45
MRPL28-208ENST00000469744 CGNL1Q0VF96 1302 aa24.11■■□□□ 1.45
MRPL28-208ENST00000469744 HSP90AB2PQ58FF8 381 aa24.1■■□□□ 1.45
MRPL28-208ENST00000469744 EMILIN1Q9Y6C2 1016 aa24.1■■□□□ 1.45
MRPL28-208ENST00000469744 KAT6BQ8WYB5 2073 aa24.1■■□□□ 1.45
MRPL28-208ENST00000469744 RGPD3A6NKT7 1758 aaPredicted RBP24.09■■□□□ 1.45
MRPL28-208ENST00000469744 RGPD4Q7Z3J3 1758 aa24.09■■□□□ 1.45
MRPL28-208ENST00000469744 USHBP1Q8N6Y0 703 aa24.09■■□□□ 1.45
MRPL28-208ENST00000469744 ACSBG1Q96GR2 724 aa24.09■■□□□ 1.45
MRPL28-208ENST00000469744 FLT4P35916 1363 aa24.09■■□□□ 1.45
MRPL28-208ENST00000469744 KCNQ2O43526 872 aa24.08■■□□□ 1.45
MRPL28-208ENST00000469744 NBPF6Q5VWK0 638 aa24.08■■□□□ 1.45
MRPL28-208ENST00000469744 NBPF4Q96M43 638 aa24.08■■□□□ 1.45
MRPL28-208ENST00000469744 PANK3Q9H999 370 aa24.08■■□□□ 1.45
MRPL28-208ENST00000469744 NHSQ6T4R5 1651 aa24.08■■□□□ 1.45
MRPL28-208ENST00000469744 ANKRD26Q9UPS8 1709 aa24.08■■□□□ 1.45
MRPL28-208ENST00000469744 MAP2P11137 1827 aaKnown RBP24.08■■□□□ 1.44
MRPL28-208ENST00000469744 MEGF6O75095 1541 aa24.07■■□□□ 1.44
MRPL28-208ENST00000469744 SMG6Q86US8 1419 aaKnown RBP24.07■■□□□ 1.44
MRPL28-208ENST00000469744 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
MRPL28-208ENST00000469744 INSRP06213 1382 aa24.06■■□□□ 1.44
MRPL28-208ENST00000469744 DDX54Q8TDD1 881 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms