RNA–Protein interactions for RNA: ENST00000469682.1

COL21A1-208, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 2

Gene COL21A1, Length 778 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-208ENST00000469682 ITPKCQ96DU7 683 aa8.84□□□□□ -0.99
COL21A1-208ENST00000469682 SOCS7O14512 581 aa8.83□□□□□ -1
COL21A1-208ENST00000469682 BMP1P13497 986 aa8.83□□□□□ -1
COL21A1-208ENST00000469682 CCDC116Q8IYX3 515 aa8.83□□□□□ -1
COL21A1-208ENST00000469682 KLF16Q9BXK1 252 aaPredicted RBP8.83□□□□□ -1
COL21A1-208ENST00000469682 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
COL21A1-208ENST00000469682 SENP2Q9HC62 589 aa8.83□□□□□ -1
COL21A1-208ENST00000469682 PRM3Q9NNZ6 103 aa8.83□□□□□ -1
COL21A1-208ENST00000469682 FBXO45P0C2W1 286 aa8.82□□□□□ -1
COL21A1-208ENST00000469682 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
COL21A1-208ENST00000469682 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
COL21A1-208ENST00000469682 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
COL21A1-208ENST00000469682 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
COL21A1-208ENST00000469682 RAB15P59190 212 aa8.8□□□□□ -1
COL21A1-208ENST00000469682 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
COL21A1-208ENST00000469682 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
COL21A1-208ENST00000469682 NR1H3Q13133 447 aa8.79□□□□□ -1
COL21A1-208ENST00000469682 SCARF1Q14162 830 aa8.79□□□□□ -1
COL21A1-208ENST00000469682 INTS6LQ5JSJ4 861 aaKnown RBP8.79□□□□□ -1
COL21A1-208ENST00000469682 MRPL14Q6P1L8 145 aaKnown RBP8.79□□□□□ -1
COL21A1-208ENST00000469682 KIFC2Q96AC6 838 aa8.79□□□□□ -1
COL21A1-208ENST00000469682 TRIM47Q96LD4 638 aa8.79□□□□□ -1
COL21A1-208ENST00000469682 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
COL21A1-208ENST00000469682 TBC1D2BQ9UPU7 963 aa8.79□□□□□ -1
COL21A1-208ENST00000469682 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
COL21A1-208ENST00000469682 TMEM132AQ24JP5 1023 aa8.78□□□□□ -1
COL21A1-208ENST00000469682 ZFP42Q96MM3 310 aa8.78□□□□□ -1
COL21A1-208ENST00000469682 ZNF330Q9Y3S2 320 aaPredicted RBP8.78□□□□□ -1
COL21A1-208ENST00000469682 UPP2O95045 317 aa8.77□□□□□ -1.01
COL21A1-208ENST00000469682 PURBQ96QR8 312 aaKnown RBP8.77□□□□□ -1.01
COL21A1-208ENST00000469682 GPR37L1O60883 481 aa8.76□□□□□ -1.01
COL21A1-208ENST00000469682 C6orf118Q5T5N4 469 aa8.76□□□□□ -1.01
COL21A1-208ENST00000469682 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
COL21A1-208ENST00000469682 ABL2P42684 1182 aa8.75□□□□□ -1.01
COL21A1-208ENST00000469682 MCM6Q14566 821 aa8.75□□□□□ -1.01
COL21A1-208ENST00000469682 GDPD2Q9HCC8 539 aa8.75□□□□□ -1.01
COL21A1-208ENST00000469682 CCDC180Q9P1Z9 1646 aa8.75□□□□□ -1.01
COL21A1-208ENST00000469682 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
COL21A1-208ENST00000469682 BMP2P12643 396 aa8.74□□□□□ -1.01
COL21A1-208ENST00000469682 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
COL21A1-208ENST00000469682 CBLBQ13191 982 aa8.74□□□□□ -1.01
COL21A1-208ENST00000469682 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
COL21A1-208ENST00000469682 ZNF592Q92610 1267 aa8.74□□□□□ -1.01
COL21A1-208ENST00000469682 TMPRSS4Q9NRS4 437 aa8.74□□□□□ -1.01
COL21A1-208ENST00000469682 ESPNB1AK53 854 aa8.73□□□□□ -1.01
COL21A1-208ENST00000469682 ERVH48-1M5A8F1 160 aa8.73□□□□□ -1.01
COL21A1-208ENST00000469682 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
COL21A1-208ENST00000469682 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
COL21A1-208ENST00000469682 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
COL21A1-208ENST00000469682 RNF20Q5VTR2 975 aa8.71□□□□□ -1.02
COL21A1-208ENST00000469682 ZNF784Q8NCA9 323 aaPredicted RBP8.71□□□□□ -1.02
COL21A1-208ENST00000469682 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
COL21A1-208ENST00000469682 IRF5Q13568 498 aa8.7□□□□□ -1.02
COL21A1-208ENST00000469682 Q6ZVU0 165 aa8.7□□□□□ -1.02
COL21A1-208ENST00000469682 TRIM52Q96A61 297 aa8.7□□□□□ -1.02
COL21A1-208ENST00000469682 VAC14Q08AM6 782 aa8.69□□□□□ -1.02
COL21A1-208ENST00000469682 FLIIQ13045 1269 aa8.69□□□□□ -1.02
COL21A1-208ENST00000469682 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
COL21A1-208ENST00000469682 CYLDQ9NQC7 956 aa8.68□□□□□ -1.02
COL21A1-208ENST00000469682 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
COL21A1-208ENST00000469682 SOBPA7XYQ1 873 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 RAD21O60216 631 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 MAN1A2O60476 641 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 ADD1P35611 737 aaKnown RBP8.67□□□□□ -1.02
COL21A1-208ENST00000469682 RELBQ01201 579 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 WASHC4Q2M389 1173 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 CCDC125Q86Z20 511 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 CEP126Q9P2H0 1117 aa8.67□□□□□ -1.02
COL21A1-208ENST00000469682 LILRA1O75019 489 aa8.66□□□□□ -1.02
COL21A1-208ENST00000469682 UBTFP17480 764 aaKnown RBP8.66□□□□□ -1.02
COL21A1-208ENST00000469682 ZNF395Q9H8N7 513 aaPredicted RBP8.66□□□□□ -1.02
COL21A1-208ENST00000469682 ADH1AP07327 375 aa8.65□□□□□ -1.02
COL21A1-208ENST00000469682 WWC1Q8IX03 1113 aa8.65□□□□□ -1.02
COL21A1-208ENST00000469682 POM121Q96HA1 1249 aa8.65□□□□□ -1.02
COL21A1-208ENST00000469682 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
COL21A1-208ENST00000469682 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
COL21A1-208ENST00000469682 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
COL21A1-208ENST00000469682 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
COL21A1-208ENST00000469682 SPINT1O43278 529 aa8.64□□□□□ -1.03
COL21A1-208ENST00000469682 FIGNL2A6NMB9 653 aa8.63□□□□□ -1.03
COL21A1-208ENST00000469682 TERTO14746 1132 aaKnown RBP8.63□□□□□ -1.03
COL21A1-208ENST00000469682 SEMA3FQ13275 785 aa8.63□□□□□ -1.03
COL21A1-208ENST00000469682 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
COL21A1-208ENST00000469682 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
COL21A1-208ENST00000469682 INSM2Q96T92 566 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-208ENST00000469682 POLMQ9NP87 494 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-208ENST00000469682 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
COL21A1-208ENST00000469682 WFS1O76024 890 aa8.62□□□□□ -1.03
COL21A1-208ENST00000469682 PTGIRP43119 386 aa8.62□□□□□ -1.03
COL21A1-208ENST00000469682 SLFNL1Q499Z3 407 aa8.62□□□□□ -1.03
COL21A1-208ENST00000469682 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
COL21A1-208ENST00000469682 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
COL21A1-208ENST00000469682 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
COL21A1-208ENST00000469682 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
COL21A1-208ENST00000469682 SCTRP47872 440 aa8.6□□□□□ -1.03
COL21A1-208ENST00000469682 VEGFBP49765 207 aa8.6□□□□□ -1.03
COL21A1-208ENST00000469682 NFX1Q12986 1120 aaKnown RBP8.6□□□□□ -1.03
COL21A1-208ENST00000469682 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.03
COL21A1-208ENST00000469682 RNF135Q8IUD6 432 aa8.6□□□□□ -1.03
COL21A1-208ENST00000469682 SLC16A10Q8TF71 515 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms