RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 MARCH10Q8NA82 808 aaPredicted RBP26.51■■□□□ 1.83
TTC28-205ENST00000469670 CABP1Q9NZU7 370 aa26.51■■□□□ 1.83
TTC28-205ENST00000469670 CASZ1Q86V15 1759 aa26.51■■□□□ 1.83
TTC28-205ENST00000469670 KIAA1210Q9ULL0 1709 aa26.51■■□□□ 1.83
TTC28-205ENST00000469670 WDR17Q8IZU2 1322 aa26.49■■□□□ 1.83
TTC28-205ENST00000469670 AXIN2Q9Y2T1 843 aa26.49■■□□□ 1.83
TTC28-205ENST00000469670 SBF2Q86WG5 1849 aa26.49■■□□□ 1.83
TTC28-205ENST00000469670 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
TTC28-205ENST00000469670 BCL9O00512 1426 aa26.48■■□□□ 1.83
TTC28-205ENST00000469670 PTGER2P43116 358 aa26.47■■□□□ 1.83
TTC28-205ENST00000469670 ATF5Q9Y2D1 282 aaPredicted RBP26.46■■□□□ 1.83
TTC28-205ENST00000469670 STK32BQ9NY57 414 aa26.45■■□□□ 1.82
TTC28-205ENST00000469670 TXNRD1Q16881 649 aa26.44■■□□□ 1.82
TTC28-205ENST00000469670 CPSF1Q10570 1443 aaKnown RBP26.43■■□□□ 1.82
TTC28-205ENST00000469670 ZNF784Q8NCA9 323 aaPredicted RBP26.43■■□□□ 1.82
TTC28-205ENST00000469670 COL18A1P39060 1754 aa26.43■■□□□ 1.82
TTC28-205ENST00000469670 MYOM1P52179 1685 aa26.42■■□□□ 1.82
TTC28-205ENST00000469670 SLC15A2Q16348 729 aa26.42■■□□□ 1.82
TTC28-205ENST00000469670 ARHGEF25Q86VW2 580 aa26.42■■□□□ 1.82
TTC28-205ENST00000469670 CARD10Q9BWT7 1032 aa26.42■■□□□ 1.82
TTC28-205ENST00000469670 CSB-PGBD3P0DP91 1061 aa26.41■■□□□ 1.82
TTC28-205ENST00000469670 FHDC1Q9C0D6 1143 aaPredicted RBP26.4■■□□□ 1.82
TTC28-205ENST00000469670 PIK3C2AO00443 1686 aa26.4■■□□□ 1.82
TTC28-205ENST00000469670 WNK3Q9BYP7 1800 aa26.39■■□□□ 1.82
TTC28-205ENST00000469670 EXOC5O00471 708 aa26.39■■□□□ 1.82
TTC28-205ENST00000469670 KCNH5Q8NCM2 988 aa26.39■■□□□ 1.82
TTC28-205ENST00000469670 SYT17Q9BSW7 474 aa26.39■■□□□ 1.82
TTC28-205ENST00000469670 SOX12O15370 315 aa26.37■■□□□ 1.81
TTC28-205ENST00000469670 MTFR1LQ9H019 292 aa26.37■■□□□ 1.81
TTC28-205ENST00000469670 QRICH2Q9H0J4 1663 aa26.37■■□□□ 1.81
TTC28-205ENST00000469670 TTC21BQ7Z4L5 1316 aa26.37■■□□□ 1.81
TTC28-205ENST00000469670 AKAP12Q02952 1782 aa26.36■■□□□ 1.81
TTC28-205ENST00000469670 EVC2Q86UK5 1308 aa26.35■■□□□ 1.81
TTC28-205ENST00000469670 SGIP1Q9BQI5 828 aa26.34■■□□□ 1.81
TTC28-205ENST00000469670 ZNF692Q9BU19 519 aaPredicted RBP26.34■■□□□ 1.81
TTC28-205ENST00000469670 CCDC7Q96M83 1385 aa26.33■■□□□ 1.81
TTC28-205ENST00000469670 TNS2Q63HR2 1409 aa26.31■■□□□ 1.8
TTC28-205ENST00000469670 UTRNP46939 3433 aa26.31■■□□□ 1.8
TTC28-205ENST00000469670 TTC21AQ8NDW8 1320 aa26.31■■□□□ 1.8
TTC28-205ENST00000469670 ACSBG1Q96GR2 724 aa26.29■■□□□ 1.8
TTC28-205ENST00000469670 ARXQ96QS3 562 aa26.29■■□□□ 1.8
TTC28-205ENST00000469670 NFAT5O94916 1531 aa26.28■■□□□ 1.8
TTC28-205ENST00000469670 TRPM1Q7Z4N2 1603 aa26.27■■□□□ 1.8
TTC28-205ENST00000469670 RGPD5Q99666 1765 aa26.27■■□□□ 1.8
TTC28-205ENST00000469670 SENP3-EIF4A1A0A087X0R7 540 aa26.25■■□□□ 1.79
TTC28-205ENST00000469670 NHSQ6T4R5 1651 aa26.25■■□□□ 1.79
TTC28-205ENST00000469670 ABCC6O95255 1503 aa26.24■■□□□ 1.79
TTC28-205ENST00000469670 MAP3K5Q99683 1374 aa26.23■■□□□ 1.79
TTC28-205ENST00000469670 C1QTNF8P60827 252 aa26.23■■□□□ 1.79
TTC28-205ENST00000469670 KTN1Q86UP2 1357 aaKnown RBP26.22■■□□□ 1.79
TTC28-205ENST00000469670 NLRP2Q9NX02 1062 aa26.22■■□□□ 1.79
TTC28-205ENST00000469670 PAPPAQ13219 1627 aa26.21■■□□□ 1.79
TTC28-205ENST00000469670 ERBB3P21860 1342 aa26.21■■□□□ 1.79
TTC28-205ENST00000469670 ZNF827Q17R98 1081 aa26.21■■□□□ 1.79
TTC28-205ENST00000469670 IL2RBP14784 551 aa26.2■■□□□ 1.78
TTC28-205ENST00000469670 L3MBTL2Q969R5 705 aa26.2■■□□□ 1.78
TTC28-205ENST00000469670 GPR162Q16538 588 aa26.17■■□□□ 1.78
TTC28-205ENST00000469670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.17■■□□□ 1.78
TTC28-205ENST00000469670 LRRC4BQ9NT99 713 aa26.17■■□□□ 1.78
TTC28-205ENST00000469670 USP31Q70CQ4 1352 aa26.16■■□□□ 1.78
TTC28-205ENST00000469670 CHD4Q14839 1912 aa26.16■■□□□ 1.78
TTC28-205ENST00000469670 ROCK2O75116 1388 aaKnown RBP26.14■■□□□ 1.78
TTC28-205ENST00000469670 ANKRD24Q8TF21 1146 aa26.13■■□□□ 1.77
TTC28-205ENST00000469670 SLC16A10Q8TF71 515 aa26.13■■□□□ 1.77
TTC28-205ENST00000469670 AKT1S1Q96B36 256 aa26.13■■□□□ 1.77
TTC28-205ENST00000469670 NME9Q86XW9 330 aa26.12■■□□□ 1.77
TTC28-205ENST00000469670 KLHL34Q8N239 644 aa26.12■■□□□ 1.77
TTC28-205ENST00000469670 BTAF1O14981 1849 aa26.11■■□□□ 1.77
TTC28-205ENST00000469670 POLD1P28340 1107 aa26.1■■□□□ 1.77
TTC28-205ENST00000469670 SLC27A3Q5K4L6 730 aa26.1■■□□□ 1.77
TTC28-205ENST00000469670 MON2Q7Z3U7 1717 aa26.08■■□□□ 1.77
TTC28-205ENST00000469670 SBNO2Q9Y2G9 1366 aa26.07■■□□□ 1.76
TTC28-205ENST00000469670 GIGYF1O75420 1035 aaPredicted RBP26.07■■□□□ 1.76
TTC28-205ENST00000469670 PELP1Q8IZL8 1130 aaKnown RBP26.07■■□□□ 1.76
TTC28-205ENST00000469670 PNPLA7Q6ZV29 1317 aa26.07■■□□□ 1.76
TTC28-205ENST00000469670 DDX54Q8TDD1 881 aaKnown RBP26.06■■□□□ 1.76
TTC28-205ENST00000469670 USP54Q70EL1 1684 aa26.06■■□□□ 1.76
TTC28-205ENST00000469670 CD163L1Q9NR16 1453 aa26.05■■□□□ 1.76
TTC28-205ENST00000469670 SIN3AQ96ST3 1273 aa26.04■■□□□ 1.76
TTC28-205ENST00000469670 TFCP2L1Q9NZI6 479 aa26.04■■□□□ 1.76
TTC28-205ENST00000469670 HDGFL2Q7Z4V5 671 aaPredicted RBP26.03■■□□□ 1.76
TTC28-205ENST00000469670 TMC1Q8TDI8 760 aa26.03■■□□□ 1.76
TTC28-205ENST00000469670 LTN1O94822 1766 aa26.02■■□□□ 1.76
TTC28-205ENST00000469670 KCNQ4P56696 695 aa26.02■■□□□ 1.76
TTC28-205ENST00000469670 NLGN2Q8NFZ4 835 aa26.02■■□□□ 1.76
TTC28-205ENST00000469670 SYTL4Q96C24 671 aaPredicted RBP26■■□□□ 1.75
TTC28-205ENST00000469670 QSER1Q2KHR3 1735 aa26■■□□□ 1.75
TTC28-205ENST00000469670 EDC4Q6P2E9 1401 aaKnown RBP25.99■■□□□ 1.75
TTC28-205ENST00000469670 PRIM1P49642 420 aaKnown RBP25.99■■□□□ 1.75
TTC28-205ENST00000469670 IP6K1Q92551 441 aa25.99■■□□□ 1.75
TTC28-205ENST00000469670 LTV1Q96GA3 475 aaPredicted RBP25.99■■□□□ 1.75
TTC28-205ENST00000469670 SLC12A5Q9H2X9 1139 aa25.99■■□□□ 1.75
TTC28-205ENST00000469670 COL24A1Q17RW2 1714 aa25.98■■□□□ 1.75
TTC28-205ENST00000469670 NEUROD1Q13562 356 aa25.98■■□□□ 1.75
TTC28-205ENST00000469670 KAT6BQ8WYB5 2073 aa25.97■■□□□ 1.75
TTC28-205ENST00000469670 ANKRD36BQ8N2N9 1353 aa25.97■■□□□ 1.75
TTC28-205ENST00000469670 IFFO2Q5TF58 517 aa25.95■■□□□ 1.74
TTC28-205ENST00000469670 TERF2IPQ9NYB0 399 aa25.95■■□□□ 1.74
TTC28-205ENST00000469670 GRIN3BO60391 1043 aa25.94■■□□□ 1.74
TTC28-205ENST00000469670 SHANK3Q9BYB0 1731 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms