RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
COL4A3-204ENST00000469504 USP31Q70CQ4 1352 aa15.53■□□□□ 0.08
COL4A3-204ENST00000469504 TRIM37O94972 964 aa15.53■□□□□ 0.08
COL4A3-204ENST00000469504 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
COL4A3-204ENST00000469504 TOM1L2Q6ZVM7 507 aa15.53■□□□□ 0.08
COL4A3-204ENST00000469504 HDGFL2Q7Z4V5 671 aaPredicted RBP15.53■□□□□ 0.08
COL4A3-204ENST00000469504 NINLQ9Y2I6 1382 aa15.52■□□□□ 0.08
COL4A3-204ENST00000469504 CAMKK2Q96RR4 588 aa15.52■□□□□ 0.08
COL4A3-204ENST00000469504 LRP5O75197 1615 aa15.52■□□□□ 0.08
COL4A3-204ENST00000469504 OVOS2A0A0G2JMS6 1433 aa15.51■□□□□ 0.07
COL4A3-204ENST00000469504 OVOS2A0A0J9YW53 1432 aa15.51■□□□□ 0.07
COL4A3-204ENST00000469504 OVOS2Q6IE36 1432 aa15.51■□□□□ 0.07
COL4A3-204ENST00000469504 ZBTB7CA1YPR0 619 aa15.51■□□□□ 0.07
COL4A3-204ENST00000469504 APBA3O96018 575 aa15.51■□□□□ 0.07
COL4A3-204ENST00000469504 TERF2IPQ9NYB0 399 aa15.51■□□□□ 0.07
COL4A3-204ENST00000469504 COL18A1P39060 1754 aa15.5■□□□□ 0.07
COL4A3-204ENST00000469504 EZH2Q15910 746 aaKnown RBP15.5■□□□□ 0.07
COL4A3-204ENST00000469504 DDB1Q16531 1140 aa15.5■□□□□ 0.07
COL4A3-204ENST00000469504 CARD10Q9BWT7 1032 aa15.5■□□□□ 0.07
COL4A3-204ENST00000469504 MON2Q7Z3U7 1717 aa15.5■□□□□ 0.07
COL4A3-204ENST00000469504 BCL9O00512 1426 aa15.5■□□□□ 0.07
COL4A3-204ENST00000469504 EDC4Q6P2E9 1401 aaKnown RBP15.5■□□□□ 0.07
COL4A3-204ENST00000469504 CCDC7Q96M83 1385 aa15.49■□□□□ 0.07
COL4A3-204ENST00000469504 NFAT5O94916 1531 aa15.49■□□□□ 0.07
COL4A3-204ENST00000469504 USP54Q70EL1 1684 aa15.49■□□□□ 0.07
COL4A3-204ENST00000469504 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
COL4A3-204ENST00000469504 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
COL4A3-204ENST00000469504 CD163L1Q9NR16 1453 aa15.48■□□□□ 0.07
COL4A3-204ENST00000469504 CSB-PGBD3P0DP91 1061 aa15.48■□□□□ 0.07
COL4A3-204ENST00000469504 TMC1Q8TDI8 760 aa15.48■□□□□ 0.07
COL4A3-204ENST00000469504 NBPF14Q5TI25 921 aa15.47■□□□□ 0.07
COL4A3-204ENST00000469504 PSDA5PKW4 1024 aaPredicted RBP15.46■□□□□ 0.07
COL4A3-204ENST00000469504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL4A3-204ENST00000469504 LRRC37A3O60309 1634 aa15.46■□□□□ 0.06
COL4A3-204ENST00000469504 PLSCR1O15162 318 aa15.45■□□□□ 0.06
COL4A3-204ENST00000469504 R3HDM1Q15032 1099 aaKnown RBP15.45■□□□□ 0.06
COL4A3-204ENST00000469504 SLC12A5Q9H2X9 1139 aa15.45■□□□□ 0.06
COL4A3-204ENST00000469504 A0A1W2PP64 1363 aa15.45■□□□□ 0.06
COL4A3-204ENST00000469504 PEAK1Q9H792 1746 aa15.44■□□□□ 0.06
COL4A3-204ENST00000469504 SOX12O15370 315 aa15.44■□□□□ 0.06
COL4A3-204ENST00000469504 TESK2Q96S53 571 aa15.44■□□□□ 0.06
COL4A3-204ENST00000469504 BCL11BQ9C0K0 894 aaPredicted RBP15.44■□□□□ 0.06
COL4A3-204ENST00000469504 RREB1Q92766 1687 aa15.44■□□□□ 0.06
COL4A3-204ENST00000469504 ERBB3P21860 1342 aa15.43■□□□□ 0.06
COL4A3-204ENST00000469504 ST20-MTHFSA0A0A6YYL1 179 aa15.43■□□□□ 0.06
COL4A3-204ENST00000469504 EXOC5O00471 708 aa15.43■□□□□ 0.06
COL4A3-204ENST00000469504 NME9Q86XW9 330 aa15.43■□□□□ 0.06
COL4A3-204ENST00000469504 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
COL4A3-204ENST00000469504 TIMELESSQ9UNS1 1208 aa15.43■□□□□ 0.06
COL4A3-204ENST00000469504 RGPD3A6NKT7 1758 aaPredicted RBP15.42■□□□□ 0.06
COL4A3-204ENST00000469504 RGPD4Q7Z3J3 1758 aa15.42■□□□□ 0.06
COL4A3-204ENST00000469504 WNK3Q9BYP7 1800 aa15.42■□□□□ 0.06
COL4A3-204ENST00000469504 TNS2Q63HR2 1409 aa15.41■□□□□ 0.06
COL4A3-204ENST00000469504 TMF1P82094 1093 aa15.4■□□□□ 0.06
COL4A3-204ENST00000469504 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
COL4A3-204ENST00000469504 MARCH10Q8NA82 808 aaPredicted RBP15.4■□□□□ 0.06
COL4A3-204ENST00000469504 CLSPNQ9HAW4 1339 aa15.4■□□□□ 0.06
COL4A3-204ENST00000469504 ANKRD36BQ8N2N9 1353 aa15.39■□□□□ 0.05
COL4A3-204ENST00000469504 NUP188Q5SRE5 1749 aa15.39■□□□□ 0.05
COL4A3-204ENST00000469504 IL2RBP14784 551 aa15.38■□□□□ 0.05
COL4A3-204ENST00000469504 COG3Q96JB2 828 aa15.38■□□□□ 0.05
COL4A3-204ENST00000469504 USP47Q96K76 1375 aa15.37■□□□□ 0.05
COL4A3-204ENST00000469504 ANKRD24Q8TF21 1146 aa15.37■□□□□ 0.05
COL4A3-204ENST00000469504 IP6K1Q92551 441 aa15.37■□□□□ 0.05
COL4A3-204ENST00000469504 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
COL4A3-204ENST00000469504 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
COL4A3-204ENST00000469504 NCBP3Q53F19 620 aaKnown RBP15.36■□□□□ 0.05
COL4A3-204ENST00000469504 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
COL4A3-204ENST00000469504 LTN1O94822 1766 aa15.35■□□□□ 0.05
COL4A3-204ENST00000469504 FAM208AQ9UK61 1670 aaKnown RBP15.34■□□□□ 0.05
COL4A3-204ENST00000469504 RTL1A6NKG5 1358 aa15.34■□□□□ 0.05
COL4A3-204ENST00000469504 SPON1Q9HCB6 807 aa15.33■□□□□ 0.04
COL4A3-204ENST00000469504 KCNQ2O43526 872 aa15.31■□□□□ 0.04
COL4A3-204ENST00000469504 AMPHP49418 695 aa15.31■□□□□ 0.04
COL4A3-204ENST00000469504 MAP3K19Q56UN5 1328 aa15.31■□□□□ 0.04
COL4A3-204ENST00000469504 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
COL4A3-204ENST00000469504 HOXC9P31274 260 aa15.3■□□□□ 0.04
COL4A3-204ENST00000469504 TXNRD1Q16881 649 aa15.3■□□□□ 0.04
COL4A3-204ENST00000469504 NHSQ6T4R5 1651 aa15.3■□□□□ 0.04
COL4A3-204ENST00000469504 FYB1O15117 783 aa15.29■□□□□ 0.04
COL4A3-204ENST00000469504 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
COL4A3-204ENST00000469504 PROM2Q8N271 834 aa15.29■□□□□ 0.04
COL4A3-204ENST00000469504 STK32BQ9NY57 414 aa15.29■□□□□ 0.04
COL4A3-204ENST00000469504 SMG6Q86US8 1419 aaKnown RBP15.28■□□□□ 0.04
COL4A3-204ENST00000469504 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
COL4A3-204ENST00000469504 ANO8Q9HCE9 1232 aaPredicted RBP15.28■□□□□ 0.04
COL4A3-204ENST00000469504 PPP1R1BQ9UD71 204 aaPredicted RBP15.27■□□□□ 0.04
COL4A3-204ENST00000469504 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
COL4A3-204ENST00000469504 SLC15A2Q16348 729 aa15.26■□□□□ 0.03
COL4A3-204ENST00000469504 LTV1Q96GA3 475 aaPredicted RBP15.25■□□□□ 0.03
COL4A3-204ENST00000469504 ACSBG1Q96GR2 724 aa15.25■□□□□ 0.03
COL4A3-204ENST00000469504 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
COL4A3-204ENST00000469504 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
COL4A3-204ENST00000469504 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
COL4A3-204ENST00000469504 INSRP06213 1382 aa15.24■□□□□ 0.03
COL4A3-204ENST00000469504 FLT4P35916 1363 aa15.24■□□□□ 0.03
COL4A3-204ENST00000469504 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
COL4A3-204ENST00000469504 CASZ1Q86V15 1759 aa15.23■□□□□ 0.03
COL4A3-204ENST00000469504 RRS1Q15050 365 aaKnown RBP15.22■□□□□ 0.03
COL4A3-204ENST00000469504 DDX54Q8TDD1 881 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms