RNA–Protein interactions for RNA: ENST00000469403.1

AGRN-205, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-205ENST00000469403 SLIT2O94813 1529 aa35.81■■■■□ 3.32
AGRN-205ENST00000469403 CDK12Q9NYV4 1490 aaPredicted RBP35.8■■■■□ 3.32
AGRN-205ENST00000469403 BLMP54132 1417 aaPredicted RBP35.8■■■■□ 3.32
AGRN-205ENST00000469403 CAMTA1Q9Y6Y1 1673 aa35.79■■■■□ 3.32
AGRN-205ENST00000469403 AMPHP49418 695 aa35.79■■■■□ 3.32
AGRN-205ENST00000469403 MEX3CQ5U5Q3 659 aaKnown RBP35.79■■■■□ 3.32
AGRN-205ENST00000469403 HOXC9P31274 260 aa35.78■■■■□ 3.32
AGRN-205ENST00000469403 MYBBP1AQ9BQG0 1328 aaKnown RBP35.78■■■■□ 3.32
AGRN-205ENST00000469403 MTHFSP49914 203 aa35.77■■■■□ 3.32
AGRN-205ENST00000469403 FNBP4Q8N3X1 1017 aaPredicted RBP35.77■■■■□ 3.32
AGRN-205ENST00000469403 C8orf37Q96NL8 207 aa35.77■■■■□ 3.32
AGRN-205ENST00000469403 INSRP06213 1382 aa35.76■■■■□ 3.32
AGRN-205ENST00000469403 ZBTB7CA1YPR0 619 aa35.76■■■■□ 3.32
AGRN-205ENST00000469403 NGLY1Q96IV0 654 aa35.76■■■■□ 3.32
AGRN-205ENST00000469403 RGPD5Q99666 1765 aa35.76■■■■□ 3.31
AGRN-205ENST00000469403 AXIN2Q9Y2T1 843 aa35.75■■■■□ 3.31
AGRN-205ENST00000469403 NRAPQ86VF7 1730 aa35.74■■■■□ 3.31
AGRN-205ENST00000469403 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.72■■■■□ 3.31
AGRN-205ENST00000469403 BTG4Q9NY30 223 aa35.72■■■■□ 3.31
AGRN-205ENST00000469403 COL5A2P05997 1499 aaPredicted RBP35.72■■■■□ 3.31
AGRN-205ENST00000469403 PPM1GO15355 546 aaPredicted RBP35.71■■■■□ 3.31
AGRN-205ENST00000469403 HSP90AB2PQ58FF8 381 aa35.7■■■■□ 3.31
AGRN-205ENST00000469403 BCL9LQ86UU0 1499 aa35.7■■■■□ 3.31
AGRN-205ENST00000469403 AFF2P51816 1311 aa35.67■■■■□ 3.3
AGRN-205ENST00000469403 COL3A1P02461 1466 aaPredicted RBP35.67■■■■□ 3.3
AGRN-205ENST00000469403 ERBB3P21860 1342 aa35.66■■■■□ 3.3
AGRN-205ENST00000469403 FAM208AQ9UK61 1670 aaKnown RBP35.65■■■■□ 3.3
AGRN-205ENST00000469403 UNC5CLQ8IV45 518 aa35.65■■■■□ 3.3
AGRN-205ENST00000469403 ANKRD24Q8TF21 1146 aa35.63■■■■□ 3.29
AGRN-205ENST00000469403 CFAP53Q96M91 514 aa35.63■■■■□ 3.29
AGRN-205ENST00000469403 WDR17Q8IZU2 1322 aa35.62■■■■□ 3.29
AGRN-205ENST00000469403 USP21Q9UK80 565 aa35.62■■■■□ 3.29
AGRN-205ENST00000469403 EVA1CP58658 441 aa35.6■■■■□ 3.29
AGRN-205ENST00000469403 EIF4A2Q14240 407 aaKnown RBP35.59■■■■□ 3.29
AGRN-205ENST00000469403 IL13P35225 146 aa35.57■■■■□ 3.28
AGRN-205ENST00000469403 CRB1P82279 1406 aa35.57■■■■□ 3.28
AGRN-205ENST00000469403 DIAPH1O60610 1272 aaKnown RBP35.56■■■■□ 3.28
AGRN-205ENST00000469403 VPS72Q15906 364 aa35.56■■■■□ 3.28
AGRN-205ENST00000469403 ZNF772Q68DY9 489 aaPredicted RBP35.56■■■■□ 3.28
AGRN-205ENST00000469403 STRN4Q9NRL3 753 aa35.56■■■■□ 3.28
AGRN-205ENST00000469403 ATRNO75882 1429 aa35.56■■■■□ 3.28
AGRN-205ENST00000469403 LARP1Q6PKG0 1096 aaKnown RBP35.55■■■■□ 3.28
AGRN-205ENST00000469403 LTV1Q96GA3 475 aaPredicted RBP35.55■■■■□ 3.28
AGRN-205ENST00000469403 RGPD1P0DJD0 1748 aa35.54■■■■□ 3.28
AGRN-205ENST00000469403 CSB-PGBD3P0DP91 1061 aa35.53■■■■□ 3.28
AGRN-205ENST00000469403 NCAPD2Q15021 1401 aa35.52■■■■□ 3.28
AGRN-205ENST00000469403 RGPD2P0DJD1 1756 aa35.52■■■■□ 3.28
AGRN-205ENST00000469403 TRPC5Q9UL62 973 aaPredicted RBP35.52■■■■□ 3.28
AGRN-205ENST00000469403 CARD10Q9BWT7 1032 aa35.51■■■■□ 3.28
AGRN-205ENST00000469403 TOM1L2Q6ZVM7 507 aa35.5■■■■□ 3.27
AGRN-205ENST00000469403 SPATA31A5Q5VU36 1347 aa35.5■■■■□ 3.27
AGRN-205ENST00000469403 SPATA31A7Q8IWB4 1347 aa35.5■■■■□ 3.27
AGRN-205ENST00000469403 RGS17Q9UGC6 210 aaPredicted RBP35.49■■■■□ 3.27
AGRN-205ENST00000469403 NBPF6Q5VWK0 638 aa35.48■■■■□ 3.27
AGRN-205ENST00000469403 NBPF4Q96M43 638 aa35.48■■■■□ 3.27
AGRN-205ENST00000469403 NLRP2Q9NX02 1062 aa35.48■■■■□ 3.27
AGRN-205ENST00000469403 SPATA31A1Q5TZJ5 1347 aa35.48■■■■□ 3.27
AGRN-205ENST00000469403 IGSF1Q8N6C5 1336 aa35.48■■■■□ 3.27
AGRN-205ENST00000469403 EYA1Q99502 592 aa35.47■■■■□ 3.27
AGRN-205ENST00000469403 CCER2I3L3R5 266 aa35.46■■■■□ 3.27
AGRN-205ENST00000469403 MIER1Q8N108 512 aa35.46■■■■□ 3.27
AGRN-205ENST00000469403 PHF23Q9BUL5 403 aaPredicted RBP35.46■■■■□ 3.27
AGRN-205ENST00000469403 QTRT2Q9H974 415 aaKnown RBP35.46■■■■□ 3.27
AGRN-205ENST00000469403 NUDCQ9Y266 331 aa35.46■■■■□ 3.27
AGRN-205ENST00000469403 CCDC184Q52MB2 194 aa35.44■■■■□ 3.26
AGRN-205ENST00000469403 THRAP3Q9Y2W1 955 aaKnown RBP35.44■■■■□ 3.26
AGRN-205ENST00000469403 GLI3P10071 1580 aa35.42■■■■□ 3.26
AGRN-205ENST00000469403 GJD4Q96KN9 370 aaPredicted RBP35.42■■■■□ 3.26
AGRN-205ENST00000469403 KDRP35968 1356 aa35.41■■■■□ 3.26
AGRN-205ENST00000469403 TCP11L2Q8N4U5 519 aa35.4■■■■□ 3.26
AGRN-205ENST00000469403 MRS2Q9HD23 443 aa35.4■■■■□ 3.26
AGRN-205ENST00000469403 CCDC9Q9Y3X0 531 aaKnown RBP35.39■■■■□ 3.26
AGRN-205ENST00000469403 WNK3Q9BYP7 1800 aa35.39■■■■□ 3.26
AGRN-205ENST00000469403 BARGINQ6ZT62 677 aa35.38■■■■□ 3.25
AGRN-205ENST00000469403 U2SURPO15042 1029 aaKnown RBP35.36■■■■□ 3.25
AGRN-205ENST00000469403 PLEKHG2Q9H7P9 1386 aa35.36■■■■□ 3.25
AGRN-205ENST00000469403 DISP2A7MBM2 1401 aa35.35■■■■□ 3.25
AGRN-205ENST00000469403 USHBP1Q8N6Y0 703 aa35.35■■■■□ 3.25
AGRN-205ENST00000469403 USP35Q9P2H5 1018 aa35.35■■■■□ 3.25
AGRN-205ENST00000469403 RBM6P78332 1123 aaKnown RBP35.34■■■■□ 3.25
AGRN-205ENST00000469403 ONECUT3O60422 494 aaPredicted RBP35.33■■■■□ 3.25
AGRN-205ENST00000469403 SULT6B1Q6IMI4 303 aa35.33■■■■□ 3.25
AGRN-205ENST00000469403 POTEAQ6S8J7 498 aa35.33■■■■□ 3.25
AGRN-205ENST00000469403 PNISRQ8TF01 805 aaKnown RBP35.33■■■■□ 3.25
AGRN-205ENST00000469403 CDCA7Q9BWT1 371 aaPredicted RBP35.33■■■■□ 3.25
AGRN-205ENST00000469403 U2AF1L5P0DN76 240 aaPredicted RBP35.32■■■■□ 3.24
AGRN-205ENST00000469403 U2AF1Q01081 240 aaKnown RBP eCLIP35.32■■■■□ 3.24
AGRN-205ENST00000469403 THSD7AQ9UPZ6 1657 aa35.31■■■■□ 3.24
AGRN-205ENST00000469403 AEBP1Q8IUX7 1158 aa35.31■■■■□ 3.24
AGRN-205ENST00000469403 PARP4Q9UKK3 1724 aaKnown RBP35.3■■■■□ 3.24
AGRN-205ENST00000469403 FCHSD2O94868 740 aa35.3■■■■□ 3.24
AGRN-205ENST00000469403 IL2RBP14784 551 aa35.29■■■■□ 3.24
AGRN-205ENST00000469403 WDR43Q15061 677 aaKnown RBP eCLIP35.29■■■■□ 3.24
AGRN-205ENST00000469403 MEGF6O75095 1541 aa35.28■■■■□ 3.24
AGRN-205ENST00000469403 HMOX1P09601 288 aa35.27■■■■□ 3.24
AGRN-205ENST00000469403 RXRBP28702 533 aa35.27■■■■□ 3.24
AGRN-205ENST00000469403 RAPGEF4Q8WZA2 1011 aa35.27■■■■□ 3.24
AGRN-205ENST00000469403 RSPH6AQ9H0K4 717 aa35.27■■■■□ 3.24
AGRN-205ENST00000469403 OVOS2A0A0G2JMS6 1433 aa35.26■■■■□ 3.24
AGRN-205ENST00000469403 FAM98CQ17RN3 349 aaKnown RBP35.26■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms