RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 IP6K1Q92551 441 aa23.39■■□□□ 1.33
PCCB-209ENST00000469217 RTL1A6NKG5 1358 aa23.39■■□□□ 1.33
PCCB-209ENST00000469217 ADAMTS2O95450 1211 aa23.38■■□□□ 1.33
PCCB-209ENST00000469217 CFAP53Q96M91 514 aa23.38■■□□□ 1.33
PCCB-209ENST00000469217 AXIN2Q9Y2T1 843 aa23.38■■□□□ 1.33
PCCB-209ENST00000469217 INSRP06213 1382 aa23.37■■□□□ 1.33
PCCB-209ENST00000469217 FAM83GA6ND36 823 aa23.37■■□□□ 1.33
PCCB-209ENST00000469217 COL18A1P39060 1754 aa23.37■■□□□ 1.33
PCCB-209ENST00000469217 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
PCCB-209ENST00000469217 LRP6O75581 1613 aa23.35■■□□□ 1.33
PCCB-209ENST00000469217 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.33
PCCB-209ENST00000469217 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
PCCB-209ENST00000469217 LMO7Q8WWI1 1683 aa23.33■■□□□ 1.33
PCCB-209ENST00000469217 ABCC6O95255 1503 aa23.33■■□□□ 1.33
PCCB-209ENST00000469217 RGPD5Q99666 1765 aa23.33■■□□□ 1.32
PCCB-209ENST00000469217 EIF4A2Q14240 407 aaKnown RBP23.32■■□□□ 1.32
PCCB-209ENST00000469217 CAMTA1Q9Y6Y1 1673 aa23.31■■□□□ 1.32
PCCB-209ENST00000469217 IL13P35225 146 aa23.31■■□□□ 1.32
PCCB-209ENST00000469217 LTV1Q96GA3 475 aaPredicted RBP23.31■■□□□ 1.32
PCCB-209ENST00000469217 COL14A1Q05707 1796 aaKnown RBP23.31■■□□□ 1.32
PCCB-209ENST00000469217 PNISRQ8TF01 805 aaKnown RBP23.31■■□□□ 1.32
PCCB-209ENST00000469217 ERBB3P21860 1342 aa23.29■■□□□ 1.32
PCCB-209ENST00000469217 ANKRD24Q8TF21 1146 aa23.29■■□□□ 1.32
PCCB-209ENST00000469217 BTG4Q9NY30 223 aa23.29■■□□□ 1.32
PCCB-209ENST00000469217 C8orf37Q96NL8 207 aa23.27■■□□□ 1.32
PCCB-209ENST00000469217 NUDCQ9Y266 331 aa23.27■■□□□ 1.32
PCCB-209ENST00000469217 COL5A2P05997 1499 aaPredicted RBP23.26■■□□□ 1.31
PCCB-209ENST00000469217 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
PCCB-209ENST00000469217 PLCH1Q4KWH8 1693 aa23.26■■□□□ 1.31
PCCB-209ENST00000469217 FAM9BQ8IZU0 186 aa23.25■■□□□ 1.31
PCCB-209ENST00000469217 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
PCCB-209ENST00000469217 MEX3CQ5U5Q3 659 aaKnown RBP23.24■■□□□ 1.31
PCCB-209ENST00000469217 NGLY1Q96IV0 654 aa23.24■■□□□ 1.31
PCCB-209ENST00000469217 EYA1Q99502 592 aa23.24■■□□□ 1.31
PCCB-209ENST00000469217 SLIT2O94813 1529 aa23.24■■□□□ 1.31
PCCB-209ENST00000469217 U2AF1L5P0DN76 240 aaPredicted RBP23.23■■□□□ 1.31
PCCB-209ENST00000469217 EVA1CP58658 441 aa23.23■■□□□ 1.31
PCCB-209ENST00000469217 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.31
PCCB-209ENST00000469217 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
PCCB-209ENST00000469217 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
PCCB-209ENST00000469217 CSB-PGBD3P0DP91 1061 aa23.22■■□□□ 1.31
PCCB-209ENST00000469217 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
PCCB-209ENST00000469217 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
PCCB-209ENST00000469217 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
PCCB-209ENST00000469217 WDR17Q8IZU2 1322 aa23.21■■□□□ 1.31
PCCB-209ENST00000469217 RGPD2P0DJD1 1756 aa23.21■■□□□ 1.31
PCCB-209ENST00000469217 FNBP4Q8N3X1 1017 aaPredicted RBP23.21■■□□□ 1.31
PCCB-209ENST00000469217 NWD2Q9ULI1 1742 aa23.2■■□□□ 1.3
PCCB-209ENST00000469217 IGSF1Q8N6C5 1336 aa23.2■■□□□ 1.3
PCCB-209ENST00000469217 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
PCCB-209ENST00000469217 ILDR1Q86SU0 546 aaPredicted RBP23.19■■□□□ 1.3
PCCB-209ENST00000469217 NRAPQ86VF7 1730 aa23.19■■□□□ 1.3
PCCB-209ENST00000469217 HMOX1P09601 288 aa23.19■■□□□ 1.3
PCCB-209ENST00000469217 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
PCCB-209ENST00000469217 SULT6B1Q6IMI4 303 aa23.18■■□□□ 1.3
PCCB-209ENST00000469217 TOM1L2Q6ZVM7 507 aa23.18■■□□□ 1.3
PCCB-209ENST00000469217 USHBP1Q8N6Y0 703 aa23.18■■□□□ 1.3
PCCB-209ENST00000469217 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
PCCB-209ENST00000469217 FAM208AQ9UK61 1670 aaKnown RBP23.18■■□□□ 1.3
PCCB-209ENST00000469217 AEBP1Q8IUX7 1158 aa23.17■■□□□ 1.3
PCCB-209ENST00000469217 UNC5CLQ8IV45 518 aa23.17■■□□□ 1.3
PCCB-209ENST00000469217 USP21Q9UK80 565 aa23.15■■□□□ 1.3
PCCB-209ENST00000469217 CRB1P82279 1406 aa23.15■■□□□ 1.3
PCCB-209ENST00000469217 KDRP35968 1356 aa23.15■■□□□ 1.3
PCCB-209ENST00000469217 AFF2P51816 1311 aa23.15■■□□□ 1.3
PCCB-209ENST00000469217 RSPH6AQ9H0K4 717 aa23.15■■□□□ 1.3
PCCB-209ENST00000469217 NCAPD2Q15021 1401 aa23.14■■□□□ 1.3
PCCB-209ENST00000469217 FCHSD2O94868 740 aa23.14■■□□□ 1.29
PCCB-209ENST00000469217 CARD10Q9BWT7 1032 aa23.13■■□□□ 1.29
PCCB-209ENST00000469217 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
PCCB-209ENST00000469217 CCDC146Q8IYE0 955 aa23.12■■□□□ 1.29
PCCB-209ENST00000469217 PRKAR2BP31323 418 aa23.11■■□□□ 1.29
PCCB-209ENST00000469217 PLEKHF1Q96S99 279 aa23.11■■□□□ 1.29
PCCB-209ENST00000469217 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.1■■□□□ 1.29
PCCB-209ENST00000469217 VPS72Q15906 364 aa23.08■■□□□ 1.29
PCCB-209ENST00000469217 PNNQ9H307 717 aaKnown RBP23.08■■□□□ 1.29
PCCB-209ENST00000469217 CCDC9Q9Y3X0 531 aaKnown RBP23.08■■□□□ 1.29
PCCB-209ENST00000469217 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.29
PCCB-209ENST00000469217 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.29
PCCB-209ENST00000469217 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.29
PCCB-209ENST00000469217 RUNDC1Q96C34 613 aa23.07■■□□□ 1.28
PCCB-209ENST00000469217 PHACTR3Q96KR7 559 aa23.07■■□□□ 1.28
PCCB-209ENST00000469217 TCP11L2Q8N4U5 519 aa23.05■■□□□ 1.28
PCCB-209ENST00000469217 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
PCCB-209ENST00000469217 MEGF6O75095 1541 aa23.04■■□□□ 1.28
PCCB-209ENST00000469217 SENP3-EIF4A1A0A087X0R7 540 aa23.04■■□□□ 1.28
PCCB-209ENST00000469217 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
PCCB-209ENST00000469217 TRPC5Q9UL62 973 aaPredicted RBP23.03■■□□□ 1.28
PCCB-209ENST00000469217 ATRNO75882 1429 aa23.03■■□□□ 1.28
PCCB-209ENST00000469217 NEFMP07197 916 aa23.03■■□□□ 1.28
PCCB-209ENST00000469217 THRAP3Q9Y2W1 955 aaKnown RBP23.03■■□□□ 1.28
PCCB-209ENST00000469217 APAF1O14727 1248 aa23.02■■□□□ 1.28
PCCB-209ENST00000469217 IL2RBP14784 551 aa23.02■■□□□ 1.28
PCCB-209ENST00000469217 TATP17735 454 aaPredicted RBP23.01■■□□□ 1.27
PCCB-209ENST00000469217 QTRT2Q9H974 415 aaKnown RBP23.01■■□□□ 1.27
PCCB-209ENST00000469217 ZNF772Q68DY9 489 aaPredicted RBP23.01■■□□□ 1.27
PCCB-209ENST00000469217 GJD4Q96KN9 370 aaPredicted RBP23.01■■□□□ 1.27
PCCB-209ENST00000469217 DISP2A7MBM2 1401 aa23■■□□□ 1.27
PCCB-209ENST00000469217 MTHFSDQ2M296 383 aaKnown RBP22.99■■□□□ 1.27
PCCB-209ENST00000469217 OVOS2A0A0G2JMS6 1433 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms