RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
NCSTN-212ENST00000469159 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
NCSTN-212ENST00000469159 POLR3AO14802 1390 aaPredicted RBP11.9□□□□□ -0.5
NCSTN-212ENST00000469159 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
NCSTN-212ENST00000469159 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
NCSTN-212ENST00000469159 CDCA7Q9BWT1 371 aaPredicted RBP11.88□□□□□ -0.51
NCSTN-212ENST00000469159 ACEP12821 1306 aa11.87□□□□□ -0.51
NCSTN-212ENST00000469159 ATP10DQ9P241 1426 aa11.87□□□□□ -0.51
NCSTN-212ENST00000469159 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
NCSTN-212ENST00000469159 TOM1L2Q6ZVM7 507 aa11.87□□□□□ -0.51
NCSTN-212ENST00000469159 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
NCSTN-212ENST00000469159 YBX3P16989 372 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■□□□ 13.8
NCSTN-212ENST00000469159 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
NCSTN-212ENST00000469159 NLGN2Q8NFZ4 835 aa11.86□□□□□ -0.51
NCSTN-212ENST00000469159 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
NCSTN-212ENST00000469159 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
NCSTN-212ENST00000469159 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
NCSTN-212ENST00000469159 POLD1P28340 1107 aa11.85□□□□□ -0.51
NCSTN-212ENST00000469159 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
NCSTN-212ENST00000469159 SLC16A10Q8TF71 515 aa11.85□□□□□ -0.51
NCSTN-212ENST00000469159 MPHOSPH9Q99550 1183 aa11.85□□□□□ -0.51
NCSTN-212ENST00000469159 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
NCSTN-212ENST00000469159 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
NCSTN-212ENST00000469159 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
NCSTN-212ENST00000469159 EXOC5O00471 708 aa11.83□□□□□ -0.52
NCSTN-212ENST00000469159 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
NCSTN-212ENST00000469159 CDK19Q9BWU1 502 aa11.83□□□□□ -0.52
NCSTN-212ENST00000469159 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
NCSTN-212ENST00000469159 LRRC4BQ9NT99 713 aa11.82□□□□□ -0.52
NCSTN-212ENST00000469159 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
NCSTN-212ENST00000469159 COL24A1Q17RW2 1714 aa11.82□□□□□ -0.52
NCSTN-212ENST00000469159 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
NCSTN-212ENST00000469159 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
NCSTN-212ENST00000469159 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
NCSTN-212ENST00000469159 ADCY9O60503 1353 aa11.8□□□□□ -0.52
NCSTN-212ENST00000469159 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
NCSTN-212ENST00000469159 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
NCSTN-212ENST00000469159 NHSQ6T4R5 1651 aa11.79□□□□□ -0.52
NCSTN-212ENST00000469159 APLP1P51693 650 aa11.79□□□□□ -0.52
NCSTN-212ENST00000469159 ZNF526Q8TF50 670 aaPredicted RBP11.79□□□□□ -0.52
NCSTN-212ENST00000469159 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
NCSTN-212ENST00000469159 PNPLA7Q6ZV29 1317 aa11.79□□□□□ -0.52
NCSTN-212ENST00000469159 COL18A1P39060 1754 aa11.79□□□□□ -0.52
NCSTN-212ENST00000469159 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
NCSTN-212ENST00000469159 SLIT3O75094 1523 aa11.78□□□□□ -0.52
NCSTN-212ENST00000469159 USP6P35125 1406 aa11.77□□□□□ -0.52
NCSTN-212ENST00000469159 TNS2Q63HR2 1409 aa11.77□□□□□ -0.52
NCSTN-212ENST00000469159 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.52
NCSTN-212ENST00000469159 NLRP6P59044 892 aa11.77□□□□□ -0.53
NCSTN-212ENST00000469159 COL13A1Q5TAT6 717 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-212ENST00000469159 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
NCSTN-212ENST00000469159 KIF3CO14782 793 aa11.76□□□□□ -0.53
NCSTN-212ENST00000469159 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
NCSTN-212ENST00000469159 TFCP2L1Q9NZI6 479 aa11.76□□□□□ -0.53
NCSTN-212ENST00000469159 CAPN15O75808 1086 aa11.75□□□□□ -0.53
NCSTN-212ENST00000469159 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
NCSTN-212ENST00000469159 PRELPP51888 382 aa11.75□□□□□ -0.53
NCSTN-212ENST00000469159 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
NCSTN-212ENST00000469159 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
NCSTN-212ENST00000469159 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
NCSTN-212ENST00000469159 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
NCSTN-212ENST00000469159 PPIP5K1Q6PFW1 1433 aa11.74□□□□□ -0.53
NCSTN-212ENST00000469159 ABCC6O95255 1503 aa11.74□□□□□ -0.53
NCSTN-212ENST00000469159 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
NCSTN-212ENST00000469159 BTAF1O14981 1849 aa11.74□□□□□ -0.53
NCSTN-212ENST00000469159 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
NCSTN-212ENST00000469159 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
NCSTN-212ENST00000469159 CD2APQ9Y5K6 639 aa11.72□□□□□ -0.53
NCSTN-212ENST00000469159 TNS4Q8IZW8 715 aa11.71□□□□□ -0.53
NCSTN-212ENST00000469159 KCNH5Q8NCM2 988 aa11.71□□□□□ -0.53
NCSTN-212ENST00000469159 TOMM70O94826 608 aa11.7□□□□□ -0.54
NCSTN-212ENST00000469159 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
NCSTN-212ENST00000469159 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
NCSTN-212ENST00000469159 PCNTO95613 3336 aa11.7□□□□□ -0.54
NCSTN-212ENST00000469159 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
NCSTN-212ENST00000469159 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
NCSTN-212ENST00000469159 KCNQ4P56696 695 aa11.69□□□□□ -0.54
NCSTN-212ENST00000469159 PIK3C2AO00443 1686 aa11.68□□□□□ -0.54
NCSTN-212ENST00000469159 IL2RBP14784 551 aa11.68□□□□□ -0.54
NCSTN-212ENST00000469159 COL23A1Q86Y22 540 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-212ENST00000469159 KLRG1Q96E93 195 aa11.68□□□□□ -0.54
NCSTN-212ENST00000469159 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
NCSTN-212ENST00000469159 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
NCSTN-212ENST00000469159 MSH5O43196 834 aa11.67□□□□□ -0.54
NCSTN-212ENST00000469159 SLC34A2O95436 690 aa11.67□□□□□ -0.54
NCSTN-212ENST00000469159 SOX12O15370 315 aa11.66□□□□□ -0.54
NCSTN-212ENST00000469159 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
NCSTN-212ENST00000469159 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
NCSTN-212ENST00000469159 ERBB3P21860 1342 aa11.65□□□□□ -0.54
NCSTN-212ENST00000469159 KAT6BQ8WYB5 2073 aa11.65□□□□□ -0.54
NCSTN-212ENST00000469159 NFAT5O94916 1531 aa11.65□□□□□ -0.55
NCSTN-212ENST00000469159 ADRA2BP18089 450 aa11.64□□□□□ -0.55
NCSTN-212ENST00000469159 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
NCSTN-212ENST00000469159 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
NCSTN-212ENST00000469159 IGSF1Q8N6C5 1336 aa11.63□□□□□ -0.55
NCSTN-212ENST00000469159 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
NCSTN-212ENST00000469159 HTRA3P83110 453 aa11.63□□□□□ -0.55
NCSTN-212ENST00000469159 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
NCSTN-212ENST00000469159 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
NCSTN-212ENST00000469159 DDX54Q8TDD1 881 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms