RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 CASZ1Q86V15 1759 aa28.24■■■□□ 2.11
UPK3B-204ENST00000469114 ANO8Q9HCE9 1232 aaPredicted RBP28.24■■■□□ 2.11
UPK3B-204ENST00000469114 COL18A1P39060 1754 aa28.24■■■□□ 2.11
UPK3B-204ENST00000469114 PIK3C2AO00443 1686 aa28.23■■■□□ 2.11
UPK3B-204ENST00000469114 WDR17Q8IZU2 1322 aa28.22■■■□□ 2.11
UPK3B-204ENST00000469114 AKAP12Q02952 1782 aa28.22■■■□□ 2.11
UPK3B-204ENST00000469114 CDCA7Q9BWT1 371 aaPredicted RBP28.22■■■□□ 2.11
UPK3B-204ENST00000469114 BCL9O00512 1426 aa28.19■■■□□ 2.1
UPK3B-204ENST00000469114 MARCH10Q8NA82 808 aaPredicted RBP28.19■■■□□ 2.1
UPK3B-204ENST00000469114 CPSF1Q10570 1443 aaKnown RBP28.18■■■□□ 2.1
UPK3B-204ENST00000469114 PTF1AQ7RTS3 328 aa28.18■■■□□ 2.1
UPK3B-204ENST00000469114 AXIN2Q9Y2T1 843 aa28.17■■■□□ 2.1
UPK3B-204ENST00000469114 PROM2Q8N271 834 aa28.15■■■□□ 2.1
UPK3B-204ENST00000469114 KCNH5Q8NCM2 988 aa28.15■■■□□ 2.1
UPK3B-204ENST00000469114 EVC2Q86UK5 1308 aa28.15■■■□□ 2.1
UPK3B-204ENST00000469114 ARHGEF25Q86VW2 580 aa28.14■■■□□ 2.1
UPK3B-204ENST00000469114 CARD10Q9BWT7 1032 aa28.14■■■□□ 2.1
UPK3B-204ENST00000469114 RGPD5Q99666 1765 aa28.14■■■□□ 2.09
UPK3B-204ENST00000469114 ZBTB7AO95365 584 aa28.13■■■□□ 2.09
UPK3B-204ENST00000469114 CSB-PGBD3P0DP91 1061 aa28.13■■■□□ 2.09
UPK3B-204ENST00000469114 TRPM1Q7Z4N2 1603 aa28.13■■■□□ 2.09
UPK3B-204ENST00000469114 MYOM1P52179 1685 aa28.13■■■□□ 2.09
UPK3B-204ENST00000469114 PDGFDQ9GZP0 370 aaPredicted RBP28.12■■■□□ 2.09
UPK3B-204ENST00000469114 STK32BQ9NY57 414 aa28.12■■■□□ 2.09
UPK3B-204ENST00000469114 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
UPK3B-204ENST00000469114 TTC21BQ7Z4L5 1316 aa28.11■■■□□ 2.09
UPK3B-204ENST00000469114 EXOC5O00471 708 aa28.1■■■□□ 2.09
UPK3B-204ENST00000469114 TXNRD1Q16881 649 aa28.1■■■□□ 2.09
UPK3B-204ENST00000469114 SOX12O15370 315 aa28.08■■■□□ 2.09
UPK3B-204ENST00000469114 PTGER2P43116 358 aa28.08■■■□□ 2.09
UPK3B-204ENST00000469114 TTC21AQ8NDW8 1320 aa28.08■■■□□ 2.09
UPK3B-204ENST00000469114 CCDC7Q96M83 1385 aa28.08■■■□□ 2.09
UPK3B-204ENST00000469114 SLC15A2Q16348 729 aa28.07■■■□□ 2.08
UPK3B-204ENST00000469114 ATF5Q9Y2D1 282 aaPredicted RBP28.07■■■□□ 2.08
UPK3B-204ENST00000469114 NFAT5O94916 1531 aa28.05■■■□□ 2.08
UPK3B-204ENST00000469114 ABCC6O95255 1503 aa28.05■■■□□ 2.08
UPK3B-204ENST00000469114 TNS2Q63HR2 1409 aa28.05■■■□□ 2.08
UPK3B-204ENST00000469114 MTFR1LQ9H019 292 aa28.02■■■□□ 2.08
UPK3B-204ENST00000469114 NHSQ6T4R5 1651 aa28.02■■■□□ 2.08
UPK3B-204ENST00000469114 L3MBTL2Q969R5 705 aa28■■■□□ 2.07
UPK3B-204ENST00000469114 SYT17Q9BSW7 474 aa28■■■□□ 2.07
UPK3B-204ENST00000469114 FHDC1Q9C0D6 1143 aaPredicted RBP28■■■□□ 2.07
UPK3B-204ENST00000469114 KTN1Q86UP2 1357 aaKnown RBP27.99■■■□□ 2.07
UPK3B-204ENST00000469114 ZNF784Q8NCA9 323 aaPredicted RBP27.98■■■□□ 2.07
UPK3B-204ENST00000469114 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
UPK3B-204ENST00000469114 ROCK2O75116 1388 aaKnown RBP27.96■■■□□ 2.07
UPK3B-204ENST00000469114 CHD4Q14839 1912 aa27.96■■■□□ 2.07
UPK3B-204ENST00000469114 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
UPK3B-204ENST00000469114 SGIP1Q9BQI5 828 aa27.95■■■□□ 2.06
UPK3B-204ENST00000469114 UTRNP46939 3433 aa27.93■■■□□ 2.06
UPK3B-204ENST00000469114 ERBB3P21860 1342 aa27.93■■■□□ 2.06
UPK3B-204ENST00000469114 PAPPAQ13219 1627 aa27.92■■■□□ 2.06
UPK3B-204ENST00000469114 USP54Q70EL1 1684 aa27.92■■■□□ 2.06
UPK3B-204ENST00000469114 NLRP2Q9NX02 1062 aa27.92■■■□□ 2.06
UPK3B-204ENST00000469114 USP31Q70CQ4 1352 aa27.91■■■□□ 2.06
UPK3B-204ENST00000469114 BTAF1O14981 1849 aa27.91■■■□□ 2.06
UPK3B-204ENST00000469114 ARXQ96QS3 562 aa27.91■■■□□ 2.06
UPK3B-204ENST00000469114 KAT6BQ8WYB5 2073 aa27.91■■■□□ 2.06
UPK3B-204ENST00000469114 IL2RBP14784 551 aa27.9■■■□□ 2.06
UPK3B-204ENST00000469114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
UPK3B-204ENST00000469114 LTN1O94822 1766 aa27.9■■■□□ 2.06
UPK3B-204ENST00000469114 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
UPK3B-204ENST00000469114 ANKRD24Q8TF21 1146 aa27.85■■■□□ 2.05
UPK3B-204ENST00000469114 NME9Q86XW9 330 aa27.84■■■□□ 2.05
UPK3B-204ENST00000469114 SBNO2Q9Y2G9 1366 aa27.84■■■□□ 2.05
UPK3B-204ENST00000469114 ZNF827Q17R98 1081 aa27.83■■■□□ 2.05
UPK3B-204ENST00000469114 SIN3AQ96ST3 1273 aa27.82■■■□□ 2.04
UPK3B-204ENST00000469114 CD163L1Q9NR16 1453 aa27.81■■■□□ 2.04
UPK3B-204ENST00000469114 HDGFL2Q7Z4V5 671 aaPredicted RBP27.8■■■□□ 2.04
UPK3B-204ENST00000469114 LRRC4BQ9NT99 713 aa27.8■■■□□ 2.04
UPK3B-204ENST00000469114 QSER1Q2KHR3 1735 aa27.8■■■□□ 2.04
UPK3B-204ENST00000469114 SENP3-EIF4A1A0A087X0R7 540 aa27.79■■■□□ 2.04
UPK3B-204ENST00000469114 TMC1Q8TDI8 760 aa27.79■■■□□ 2.04
UPK3B-204ENST00000469114 SLC16A10Q8TF71 515 aa27.79■■■□□ 2.04
UPK3B-204ENST00000469114 C1QTNF8P60827 252 aa27.78■■■□□ 2.04
UPK3B-204ENST00000469114 NEUROD1Q13562 356 aa27.78■■■□□ 2.04
UPK3B-204ENST00000469114 GPR162Q16538 588 aa27.78■■■□□ 2.04
UPK3B-204ENST00000469114 SLC27A3Q5K4L6 730 aa27.78■■■□□ 2.04
UPK3B-204ENST00000469114 EDC4Q6P2E9 1401 aaKnown RBP27.77■■■□□ 2.04
UPK3B-204ENST00000469114 AKT1S1Q96B36 256 aa27.77■■■□□ 2.04
UPK3B-204ENST00000469114 FAM208AQ9UK61 1670 aaKnown RBP27.76■■■□□ 2.03
UPK3B-204ENST00000469114 POLD1P28340 1107 aa27.76■■■□□ 2.03
UPK3B-204ENST00000469114 KLHL34Q8N239 644 aa27.74■■■□□ 2.03
UPK3B-204ENST00000469114 DDX54Q8TDD1 881 aaKnown RBP27.74■■■□□ 2.03
UPK3B-204ENST00000469114 COL24A1Q17RW2 1714 aa27.73■■■□□ 2.03
UPK3B-204ENST00000469114 TERF2IPQ9NYB0 399 aa27.73■■■□□ 2.03
UPK3B-204ENST00000469114 SLC12A5Q9H2X9 1139 aa27.72■■■□□ 2.03
UPK3B-204ENST00000469114 IP6K1Q92551 441 aa27.71■■■□□ 2.03
UPK3B-204ENST00000469114 CARD11Q9BXL7 1154 aa27.71■■■□□ 2.03
UPK3B-204ENST00000469114 PNPLA7Q6ZV29 1317 aa27.7■■■□□ 2.03
UPK3B-204ENST00000469114 TUBGCP6Q96RT7 1819 aa27.69■■■□□ 2.02
UPK3B-204ENST00000469114 TFCP2L1Q9NZI6 479 aa27.69■■■□□ 2.02
UPK3B-204ENST00000469114 A0A1W2PP64 1363 aa27.69■■■□□ 2.02
UPK3B-204ENST00000469114 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
UPK3B-204ENST00000469114 SYTL4Q96C24 671 aaPredicted RBP27.68■■■□□ 2.02
UPK3B-204ENST00000469114 LTV1Q96GA3 475 aaPredicted RBP27.68■■■□□ 2.02
UPK3B-204ENST00000469114 DOT1LQ8TEK3 1739 aa27.67■■■□□ 2.02
UPK3B-204ENST00000469114 ANKRD36BQ8N2N9 1353 aa27.67■■■□□ 2.02
UPK3B-204ENST00000469114 LY75O60449 1722 aa27.66■■■□□ 2.02
UPK3B-204ENST00000469114 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms