RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 PPIP5K1Q6PFW1 1433 aa12.01□□□□□ -0.49
SYN3-210ENST00000468922 SLC15A2Q16348 729 aa12□□□□□ -0.49
SYN3-210ENST00000468922 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
SYN3-210ENST00000468922 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
SYN3-210ENST00000468922 OVOS2A0A0J9YW53 1432 aa12□□□□□ -0.49
SYN3-210ENST00000468922 OVOS2Q6IE36 1432 aa12□□□□□ -0.49
SYN3-210ENST00000468922 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
SYN3-210ENST00000468922 DDB1Q16531 1140 aa11.99□□□□□ -0.49
SYN3-210ENST00000468922 ARXQ96QS3 562 aa11.99□□□□□ -0.49
SYN3-210ENST00000468922 CABP1Q9NZU7 370 aa11.99□□□□□ -0.49
SYN3-210ENST00000468922 UTRNP46939 3433 aa11.98□□□□□ -0.49
SYN3-210ENST00000468922 TXNRD1Q16881 649 aa11.98□□□□□ -0.49
SYN3-210ENST00000468922 PTF1AQ7RTS3 328 aa11.98□□□□□ -0.49
SYN3-210ENST00000468922 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
SYN3-210ENST00000468922 MYOM1P52179 1685 aa11.97□□□□□ -0.49
SYN3-210ENST00000468922 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
SYN3-210ENST00000468922 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
SYN3-210ENST00000468922 TESK2Q96S53 571 aa11.97□□□□□ -0.49
SYN3-210ENST00000468922 CASZ1Q86V15 1759 aa11.97□□□□□ -0.49
SYN3-210ENST00000468922 USP6P35125 1406 aa11.96□□□□□ -0.49
SYN3-210ENST00000468922 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
SYN3-210ENST00000468922 CPDO75976 1380 aa11.95□□□□□ -0.5
SYN3-210ENST00000468922 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
SYN3-210ENST00000468922 AKAP12Q02952 1782 aa11.95□□□□□ -0.5
SYN3-210ENST00000468922 PHRF1Q9P1Y6 1649 aaKnown RBP11.94□□□□□ -0.5
SYN3-210ENST00000468922 USP19O94966 1318 aa11.94□□□□□ -0.5
SYN3-210ENST00000468922 ST20-MTHFSA0A0A6YYL1 179 aa11.94□□□□□ -0.5
SYN3-210ENST00000468922 GCP02774 474 aa11.94□□□□□ -0.5
SYN3-210ENST00000468922 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
SYN3-210ENST00000468922 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
SYN3-210ENST00000468922 CRB1P82279 1406 aa11.94□□□□□ -0.5
SYN3-210ENST00000468922 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
SYN3-210ENST00000468922 ZBTB7CA1YPR0 619 aa11.93□□□□□ -0.5
SYN3-210ENST00000468922 TOM1L2Q6ZVM7 507 aa11.93□□□□□ -0.5
SYN3-210ENST00000468922 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
SYN3-210ENST00000468922 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
SYN3-210ENST00000468922 USP47Q96K76 1375 aa11.92□□□□□ -0.5
SYN3-210ENST00000468922 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
SYN3-210ENST00000468922 CEP350Q5VT06 3117 aa11.92□□□□□ -0.5
SYN3-210ENST00000468922 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
SYN3-210ENST00000468922 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
SYN3-210ENST00000468922 CHD4Q14839 1912 aa11.92□□□□□ -0.5
SYN3-210ENST00000468922 TTC21BQ7Z4L5 1316 aa11.91□□□□□ -0.5
SYN3-210ENST00000468922 COL5A2P05997 1499 aaPredicted RBP11.91□□□□□ -0.5
SYN3-210ENST00000468922 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
SYN3-210ENST00000468922 CDCA7Q9BWT1 371 aaPredicted RBP11.91□□□□□ -0.5
SYN3-210ENST00000468922 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
SYN3-210ENST00000468922 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
SYN3-210ENST00000468922 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
SYN3-210ENST00000468922 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.5
SYN3-210ENST00000468922 BCL9O00512 1426 aa11.9□□□□□ -0.5
SYN3-210ENST00000468922 SLIT3O75094 1523 aa11.9□□□□□ -0.5
SYN3-210ENST00000468922 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
SYN3-210ENST00000468922 EXOC5O00471 708 aa11.89□□□□□ -0.51
SYN3-210ENST00000468922 POLD1P28340 1107 aa11.89□□□□□ -0.51
SYN3-210ENST00000468922 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
SYN3-210ENST00000468922 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
SYN3-210ENST00000468922 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
SYN3-210ENST00000468922 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
SYN3-210ENST00000468922 HSPA6P17066 643 aa11.88□□□□□ -0.51
SYN3-210ENST00000468922 NLRP6P59044 892 aa11.88□□□□□ -0.51
SYN3-210ENST00000468922 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
SYN3-210ENST00000468922 TMF1P82094 1093 aa11.87□□□□□ -0.51
SYN3-210ENST00000468922 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
SYN3-210ENST00000468922 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
SYN3-210ENST00000468922 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
SYN3-210ENST00000468922 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
SYN3-210ENST00000468922 TERF2IPQ9NYB0 399 aa11.86□□□□□ -0.51
SYN3-210ENST00000468922 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
SYN3-210ENST00000468922 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
SYN3-210ENST00000468922 EDC4Q6P2E9 1401 aaKnown RBP11.86□□□□□ -0.51
SYN3-210ENST00000468922 WDR17Q8IZU2 1322 aa11.86□□□□□ -0.51
SYN3-210ENST00000468922 GPBP1L1Q9HC44 474 aaPredicted RBP11.85□□□□□ -0.51
SYN3-210ENST00000468922 CSB-PGBD3P0DP91 1061 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 CDCA8Q53HL2 280 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 CARD10Q9BWT7 1032 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 COL18A1P39060 1754 aa11.84□□□□□ -0.51
SYN3-210ENST00000468922 SBF2Q86WG5 1849 aa11.83□□□□□ -0.51
SYN3-210ENST00000468922 ANKRD36BQ8N2N9 1353 aa11.83□□□□□ -0.52
SYN3-210ENST00000468922 NFAT5O94916 1531 aa11.83□□□□□ -0.52
SYN3-210ENST00000468922 ARHGEF25Q86VW2 580 aa11.83□□□□□ -0.52
SYN3-210ENST00000468922 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
SYN3-210ENST00000468922 SHANK3Q9BYB0 1731 aa11.83□□□□□ -0.52
SYN3-210ENST00000468922 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
SYN3-210ENST00000468922 NME9Q86XW9 330 aa11.82□□□□□ -0.52
SYN3-210ENST00000468922 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
SYN3-210ENST00000468922 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
SYN3-210ENST00000468922 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
SYN3-210ENST00000468922 LRRC4BQ9NT99 713 aa11.81□□□□□ -0.52
SYN3-210ENST00000468922 ZNF526Q8TF50 670 aaPredicted RBP11.8□□□□□ -0.52
SYN3-210ENST00000468922 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
SYN3-210ENST00000468922 ABCC6O95255 1503 aa11.8□□□□□ -0.52
SYN3-210ENST00000468922 HSPA5P11021 654 aaKnown RBP11.79□□□□□ -0.52
SYN3-210ENST00000468922 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
SYN3-210ENST00000468922 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms