RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ADAMTS8Q9UP79 889 aa23.41■■□□□ 1.34
RPL39-202ENST00000468844 CPDO75976 1380 aa23.39■■□□□ 1.33
RPL39-202ENST00000468844 ABCC6O95255 1503 aa23.39■■□□□ 1.33
RPL39-202ENST00000468844 LMO7Q8WWI1 1683 aa23.38■■□□□ 1.33
RPL39-202ENST00000468844 KIAA0232Q92628 1395 aa23.38■■□□□ 1.33
RPL39-202ENST00000468844 ZBTB7CA1YPR0 619 aa23.38■■□□□ 1.33
RPL39-202ENST00000468844 IL13P35225 146 aa23.38■■□□□ 1.33
RPL39-202ENST00000468844 IP6K1Q92551 441 aa23.37■■□□□ 1.33
RPL39-202ENST00000468844 BLMP54132 1417 aaPredicted RBP23.37■■□□□ 1.33
RPL39-202ENST00000468844 EIF4A2Q14240 407 aaKnown RBP23.37■■□□□ 1.33
RPL39-202ENST00000468844 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
RPL39-202ENST00000468844 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
RPL39-202ENST00000468844 HAP1P54257 671 aaPredicted RBP23.35■■□□□ 1.33
RPL39-202ENST00000468844 AXIN2Q9Y2T1 843 aa23.34■■□□□ 1.33
RPL39-202ENST00000468844 FAM208AQ9UK61 1670 aaKnown RBP23.34■■□□□ 1.33
RPL39-202ENST00000468844 U2AF1L5P0DN76 240 aaPredicted RBP23.33■■□□□ 1.33
RPL39-202ENST00000468844 U2AF1Q01081 240 aaKnown RBP eCLIP23.33■■□□□ 1.33
RPL39-202ENST00000468844 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
RPL39-202ENST00000468844 CAMTA1Q9Y6Y1 1673 aa23.32■■□□□ 1.32
RPL39-202ENST00000468844 CHRNA2Q15822 529 aa23.31■■□□□ 1.32
RPL39-202ENST00000468844 HSPA1LP34931 641 aa23.31■■□□□ 1.32
RPL39-202ENST00000468844 PLCH1Q4KWH8 1693 aa23.31■■□□□ 1.32
RPL39-202ENST00000468844 JCADQ9P266 1359 aa23.31■■□□□ 1.32
RPL39-202ENST00000468844 PRDM11Q9NQV5 511 aa23.3■■□□□ 1.32
RPL39-202ENST00000468844 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
RPL39-202ENST00000468844 DLG5Q8TDM6 1919 aa23.29■■□□□ 1.32
RPL39-202ENST00000468844 HNRNPUQ00839 825 aaKnown RBP eCLIP23.28■■□□□ 1.32
RPL39-202ENST00000468844 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
RPL39-202ENST00000468844 ERBB3P21860 1342 aa23.28■■□□□ 1.32
RPL39-202ENST00000468844 IGSF1Q8N6C5 1336 aa23.26■■□□□ 1.31
RPL39-202ENST00000468844 HMOX1P09601 288 aa23.26■■□□□ 1.31
RPL39-202ENST00000468844 EYA1Q99502 592 aa23.26■■□□□ 1.31
RPL39-202ENST00000468844 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
RPL39-202ENST00000468844 ANKRD24Q8TF21 1146 aa23.25■■□□□ 1.31
RPL39-202ENST00000468844 RSPH6AQ9H0K4 717 aa23.25■■□□□ 1.31
RPL39-202ENST00000468844 KDRP35968 1356 aa23.25■■□□□ 1.31
RPL39-202ENST00000468844 COL5A2P05997 1499 aaPredicted RBP23.24■■□□□ 1.31
RPL39-202ENST00000468844 FAM83GA6ND36 823 aa23.24■■□□□ 1.31
RPL39-202ENST00000468844 AEBP1Q8IUX7 1158 aa23.24■■□□□ 1.31
RPL39-202ENST00000468844 FCHSD2O94868 740 aa23.23■■□□□ 1.31
RPL39-202ENST00000468844 PLEKHF1Q96S99 279 aa23.23■■□□□ 1.31
RPL39-202ENST00000468844 NRAPQ86VF7 1730 aa23.23■■□□□ 1.31
RPL39-202ENST00000468844 NWD2Q9ULI1 1742 aa23.23■■□□□ 1.31
RPL39-202ENST00000468844 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
RPL39-202ENST00000468844 NCAPD2Q15021 1401 aa23.22■■□□□ 1.31
RPL39-202ENST00000468844 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
RPL39-202ENST00000468844 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
RPL39-202ENST00000468844 NBPF6Q5VWK0 638 aa23.21■■□□□ 1.31
RPL39-202ENST00000468844 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
RPL39-202ENST00000468844 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
RPL39-202ENST00000468844 NBPF4Q96M43 638 aa23.21■■□□□ 1.31
RPL39-202ENST00000468844 LRP6O75581 1613 aa23.21■■□□□ 1.31
RPL39-202ENST00000468844 PRKAR2BP31323 418 aa23.21■■□□□ 1.31
RPL39-202ENST00000468844 ADAMTS2O95450 1211 aa23.2■■□□□ 1.3
RPL39-202ENST00000468844 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
RPL39-202ENST00000468844 APAF1O14727 1248 aa23.19■■□□□ 1.3
RPL39-202ENST00000468844 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
RPL39-202ENST00000468844 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
RPL39-202ENST00000468844 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
RPL39-202ENST00000468844 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
RPL39-202ENST00000468844 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
RPL39-202ENST00000468844 TCP11L2Q8N4U5 519 aa23.16■■□□□ 1.3
RPL39-202ENST00000468844 WDR17Q8IZU2 1322 aa23.16■■□□□ 1.3
RPL39-202ENST00000468844 PHACTR3Q96KR7 559 aa23.16■■□□□ 1.3
RPL39-202ENST00000468844 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
RPL39-202ENST00000468844 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
RPL39-202ENST00000468844 SALL2Q9Y467 1007 aaPredicted RBP23.15■■□□□ 1.3
RPL39-202ENST00000468844 WNK3Q9BYP7 1800 aa23.14■■□□□ 1.29
RPL39-202ENST00000468844 SLIT2O94813 1529 aa23.14■■□□□ 1.29
RPL39-202ENST00000468844 NLRP2Q9NX02 1062 aa23.13■■□□□ 1.29
RPL39-202ENST00000468844 STRN4Q9NRL3 753 aa23.12■■□□□ 1.29
RPL39-202ENST00000468844 PARP4Q9UKK3 1724 aaKnown RBP23.12■■□□□ 1.29
RPL39-202ENST00000468844 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.12■■□□□ 1.29
RPL39-202ENST00000468844 RRP7AQ9Y3A4 280 aaKnown RBP23.12■■□□□ 1.29
RPL39-202ENST00000468844 NEFMP07197 916 aa23.1■■□□□ 1.29
RPL39-202ENST00000468844 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
RPL39-202ENST00000468844 LARP1Q6PKG0 1096 aaKnown RBP23.1■■□□□ 1.29
RPL39-202ENST00000468844 CRB1P82279 1406 aa23.1■■□□□ 1.29
RPL39-202ENST00000468844 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
RPL39-202ENST00000468844 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
RPL39-202ENST00000468844 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
RPL39-202ENST00000468844 EVA1CP58658 441 aa23.09■■□□□ 1.29
RPL39-202ENST00000468844 FBXO41Q8TF61 875 aa23.08■■□□□ 1.29
RPL39-202ENST00000468844 MEGF6O75095 1541 aa23.08■■□□□ 1.29
RPL39-202ENST00000468844 C8orf37Q96NL8 207 aa23.08■■□□□ 1.28
RPL39-202ENST00000468844 ZNF521Q96K83 1311 aa23.07■■□□□ 1.28
RPL39-202ENST00000468844 SHANK3Q9BYB0 1731 aa23.06■■□□□ 1.28
RPL39-202ENST00000468844 NFE2L2Q16236 605 aa23.06■■□□□ 1.28
RPL39-202ENST00000468844 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
RPL39-202ENST00000468844 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
RPL39-202ENST00000468844 CARD10Q9BWT7 1032 aa23.06■■□□□ 1.28
RPL39-202ENST00000468844 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
RPL39-202ENST00000468844 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
RPL39-202ENST00000468844 RIPK4P57078 832 aa23.04■■□□□ 1.28
RPL39-202ENST00000468844 MTHFSDQ2M296 383 aaKnown RBP23.04■■□□□ 1.28
RPL39-202ENST00000468844 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
RPL39-202ENST00000468844 NGLY1Q96IV0 654 aa23.04■■□□□ 1.28
RPL39-202ENST00000468844 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
RPL39-202ENST00000468844 WWC1Q8IX03 1113 aa23.03■■□□□ 1.28
RPL39-202ENST00000468844 TRIM35Q9UPQ4 493 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms