RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 USP31Q70CQ4 1352 aa20.57■□□□□ 0.88
COL16A1-208ENST00000468459 WDR17Q8IZU2 1322 aa20.56■□□□□ 0.88
COL16A1-208ENST00000468459 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
COL16A1-208ENST00000468459 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
COL16A1-208ENST00000468459 COL18A1P39060 1754 aa20.56■□□□□ 0.88
COL16A1-208ENST00000468459 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
COL16A1-208ENST00000468459 APBA3O96018 575 aa20.55■□□□□ 0.88
COL16A1-208ENST00000468459 TOM1L2Q6ZVM7 507 aa20.55■□□□□ 0.88
COL16A1-208ENST00000468459 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
COL16A1-208ENST00000468459 NFAT5O94916 1531 aa20.54■□□□□ 0.88
COL16A1-208ENST00000468459 TNS1Q9HBL0 1735 aaKnown RBP20.54■□□□□ 0.88
COL16A1-208ENST00000468459 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
COL16A1-208ENST00000468459 PARD3Q8TEW0 1356 aa20.54■□□□□ 0.88
COL16A1-208ENST00000468459 SOX12O15370 315 aa20.53■□□□□ 0.88
COL16A1-208ENST00000468459 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
COL16A1-208ENST00000468459 AKAP12Q02952 1782 aa20.53■□□□□ 0.88
COL16A1-208ENST00000468459 SLC24A1O60721 1099 aa20.52■□□□□ 0.88
COL16A1-208ENST00000468459 NME9Q86XW9 330 aa20.52■□□□□ 0.88
COL16A1-208ENST00000468459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL16A1-208ENST00000468459 R3HDM1Q15032 1099 aaKnown RBP20.51■□□□□ 0.87
COL16A1-208ENST00000468459 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
COL16A1-208ENST00000468459 CARD10Q9BWT7 1032 aa20.51■□□□□ 0.87
COL16A1-208ENST00000468459 PARP4Q9UKK3 1724 aaKnown RBP20.5■□□□□ 0.87
COL16A1-208ENST00000468459 DDB1Q16531 1140 aa20.5■□□□□ 0.87
COL16A1-208ENST00000468459 MYOM1P52179 1685 aa20.49■□□□□ 0.87
COL16A1-208ENST00000468459 CDCA7Q9BWT1 371 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-208ENST00000468459 A0A1W2PP64 1363 aa20.48■□□□□ 0.87
COL16A1-208ENST00000468459 OVOS2A0A0G2JMS6 1433 aa20.48■□□□□ 0.87
COL16A1-208ENST00000468459 OVOS2A0A0J9YW53 1432 aa20.48■□□□□ 0.87
COL16A1-208ENST00000468459 OVOS2Q6IE36 1432 aa20.48■□□□□ 0.87
COL16A1-208ENST00000468459 CDCA8Q53HL2 280 aa20.48■□□□□ 0.87
COL16A1-208ENST00000468459 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-208ENST00000468459 MARCH10Q8NA82 808 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-208ENST00000468459 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
COL16A1-208ENST00000468459 BCL9O00512 1426 aa20.47■□□□□ 0.87
COL16A1-208ENST00000468459 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
COL16A1-208ENST00000468459 ABCC6O95255 1503 aa20.47■□□□□ 0.87
COL16A1-208ENST00000468459 CSB-PGBD3P0DP91 1061 aa20.46■□□□□ 0.87
COL16A1-208ENST00000468459 TERF2IPQ9NYB0 399 aa20.46■□□□□ 0.87
COL16A1-208ENST00000468459 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
COL16A1-208ENST00000468459 LRP5O75197 1615 aa20.45■□□□□ 0.87
COL16A1-208ENST00000468459 PEAK1Q9H792 1746 aa20.45■□□□□ 0.86
COL16A1-208ENST00000468459 PTF1AQ7RTS3 328 aa20.45■□□□□ 0.86
COL16A1-208ENST00000468459 ERBB3P21860 1342 aa20.45■□□□□ 0.86
COL16A1-208ENST00000468459 KIF7Q2M1P5 1343 aa20.45■□□□□ 0.86
COL16A1-208ENST00000468459 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
COL16A1-208ENST00000468459 CCDC7Q96M83 1385 aa20.44■□□□□ 0.86
COL16A1-208ENST00000468459 USP54Q70EL1 1684 aa20.43■□□□□ 0.86
COL16A1-208ENST00000468459 PLSCR1O15162 318 aa20.43■□□□□ 0.86
COL16A1-208ENST00000468459 BCL11BQ9C0K0 894 aaPredicted RBP20.43■□□□□ 0.86
COL16A1-208ENST00000468459 ANKRD36BQ8N2N9 1353 aa20.41■□□□□ 0.86
COL16A1-208ENST00000468459 EXOC5O00471 708 aa20.4■□□□□ 0.86
COL16A1-208ENST00000468459 WASHC2AQ641Q2 1341 aa20.4■□□□□ 0.86
COL16A1-208ENST00000468459 PROM2Q8N271 834 aa20.39■□□□□ 0.85
COL16A1-208ENST00000468459 RREB1Q92766 1687 aa20.38■□□□□ 0.85
COL16A1-208ENST00000468459 NBPF14Q5TI25 921 aa20.38■□□□□ 0.85
COL16A1-208ENST00000468459 ANKRD24Q8TF21 1146 aa20.38■□□□□ 0.85
COL16A1-208ENST00000468459 NLRP2Q9NX02 1062 aa20.37■□□□□ 0.85
COL16A1-208ENST00000468459 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
COL16A1-208ENST00000468459 IP6K1Q92551 441 aa20.36■□□□□ 0.85
COL16A1-208ENST00000468459 RGPD5Q99666 1765 aa20.36■□□□□ 0.85
COL16A1-208ENST00000468459 CARD14Q9BXL6 1004 aa20.35■□□□□ 0.85
COL16A1-208ENST00000468459 NUP188Q5SRE5 1749 aa20.35■□□□□ 0.85
COL16A1-208ENST00000468459 NSD3Q9BZ95 1437 aa20.35■□□□□ 0.85
COL16A1-208ENST00000468459 IL2RBP14784 551 aa20.34■□□□□ 0.85
COL16A1-208ENST00000468459 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
COL16A1-208ENST00000468459 FBLN1P23142 703 aa20.33■□□□□ 0.85
COL16A1-208ENST00000468459 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.85
COL16A1-208ENST00000468459 MAP3K19Q56UN5 1328 aa20.32■□□□□ 0.84
COL16A1-208ENST00000468459 KCNQ2O43526 872 aa20.32■□□□□ 0.84
COL16A1-208ENST00000468459 COG3Q96JB2 828 aa20.32■□□□□ 0.84
COL16A1-208ENST00000468459 FYB1O15117 783 aa20.31■□□□□ 0.84
COL16A1-208ENST00000468459 PANK3Q9H999 370 aa20.31■□□□□ 0.84
COL16A1-208ENST00000468459 SBF2Q86WG5 1849 aa20.3■□□□□ 0.84
COL16A1-208ENST00000468459 HOXC9P31274 260 aa20.29■□□□□ 0.84
COL16A1-208ENST00000468459 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
COL16A1-208ENST00000468459 RGPD3A6NKT7 1758 aaPredicted RBP20.29■□□□□ 0.84
COL16A1-208ENST00000468459 RGPD4Q7Z3J3 1758 aa20.29■□□□□ 0.84
COL16A1-208ENST00000468459 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
COL16A1-208ENST00000468459 LTN1O94822 1766 aa20.26■□□□□ 0.83
COL16A1-208ENST00000468459 ACSBG1Q96GR2 724 aa20.26■□□□□ 0.83
COL16A1-208ENST00000468459 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
COL16A1-208ENST00000468459 AMPHP49418 695 aa20.25■□□□□ 0.83
COL16A1-208ENST00000468459 PDGFDQ9GZP0 370 aaPredicted RBP20.25■□□□□ 0.83
COL16A1-208ENST00000468459 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
COL16A1-208ENST00000468459 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
COL16A1-208ENST00000468459 RRS1Q15050 365 aaKnown RBP20.24■□□□□ 0.83
COL16A1-208ENST00000468459 RTL1A6NKG5 1358 aa20.22■□□□□ 0.83
COL16A1-208ENST00000468459 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
COL16A1-208ENST00000468459 CGNL1Q0VF96 1302 aa20.21■□□□□ 0.83
COL16A1-208ENST00000468459 NBPF6Q5VWK0 638 aa20.2■□□□□ 0.82
COL16A1-208ENST00000468459 DDX54Q8TDD1 881 aaKnown RBP20.2■□□□□ 0.82
COL16A1-208ENST00000468459 NBPF4Q96M43 638 aa20.2■□□□□ 0.82
COL16A1-208ENST00000468459 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
COL16A1-208ENST00000468459 STK32BQ9NY57 414 aa20.19■□□□□ 0.82
COL16A1-208ENST00000468459 PER1O15534 1290 aaPredicted RBP20.18■□□□□ 0.82
COL16A1-208ENST00000468459 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
COL16A1-208ENST00000468459 KNSTRNQ9Y448 316 aa20.18■□□□□ 0.82
COL16A1-208ENST00000468459 MEGF6O75095 1541 aa20.17■□□□□ 0.82
COL16A1-208ENST00000468459 PTGER2P43116 358 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms