RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
COL4A6-205ENST00000468338 SLC12A5Q9H2X9 1139 aa15.69■□□□□ 0.1
COL4A6-205ENST00000468338 CIZ1Q9ULV3 898 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-205ENST00000468338 PIK3C2AO00443 1686 aa15.69■□□□□ 0.1
COL4A6-205ENST00000468338 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
COL4A6-205ENST00000468338 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-205ENST00000468338 GCP02774 474 aa15.68■□□□□ 0.1
COL4A6-205ENST00000468338 PRDM11Q9NQV5 511 aa15.68■□□□□ 0.1
COL4A6-205ENST00000468338 BTG4Q9NY30 223 aa15.68■□□□□ 0.1
COL4A6-205ENST00000468338 SLIT3O75094 1523 aa15.68■□□□□ 0.1
COL4A6-205ENST00000468338 KTN1Q86UP2 1357 aaKnown RBP15.67■□□□□ 0.1
COL4A6-205ENST00000468338 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
COL4A6-205ENST00000468338 NLRP6P59044 892 aa15.67■□□□□ 0.1
COL4A6-205ENST00000468338 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
COL4A6-205ENST00000468338 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
COL4A6-205ENST00000468338 TMF1P82094 1093 aa15.65■□□□□ 0.1
COL4A6-205ENST00000468338 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
COL4A6-205ENST00000468338 UPF1Q92900 1129 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL4A6-205ENST00000468338 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
COL4A6-205ENST00000468338 LMO7Q8WWI1 1683 aa15.64■□□□□ 0.09
COL4A6-205ENST00000468338 CHRNA2Q15822 529 aa15.64■□□□□ 0.09
COL4A6-205ENST00000468338 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
COL4A6-205ENST00000468338 TERF2IPQ9NYB0 399 aa15.64■□□□□ 0.09
COL4A6-205ENST00000468338 USP54Q70EL1 1684 aa15.63■□□□□ 0.09
COL4A6-205ENST00000468338 CAMTA1Q9Y6Y1 1673 aa15.63■□□□□ 0.09
COL4A6-205ENST00000468338 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
COL4A6-205ENST00000468338 HDGFL2Q7Z4V5 671 aaPredicted RBP15.63■□□□□ 0.09
COL4A6-205ENST00000468338 SPATA31A5Q5VU36 1347 aa15.63■□□□□ 0.09
COL4A6-205ENST00000468338 SPATA31A7Q8IWB4 1347 aa15.63■□□□□ 0.09
COL4A6-205ENST00000468338 KCNH5Q8NCM2 988 aa15.61■□□□□ 0.09
COL4A6-205ENST00000468338 COL18A1P39060 1754 aa15.61■□□□□ 0.09
COL4A6-205ENST00000468338 AATKQ6ZMQ8 1374 aa15.61■□□□□ 0.09
COL4A6-205ENST00000468338 CDCA8Q53HL2 280 aa15.6■□□□□ 0.09
COL4A6-205ENST00000468338 ARHGEF25Q86VW2 580 aa15.6■□□□□ 0.09
COL4A6-205ENST00000468338 SEPT12Q8IYM1 358 aa15.6■□□□□ 0.09
COL4A6-205ENST00000468338 ANKRD36BQ8N2N9 1353 aa15.6■□□□□ 0.09
COL4A6-205ENST00000468338 BRWD3Q6RI45 1802 aa15.59■□□□□ 0.09
COL4A6-205ENST00000468338 NFAT5O94916 1531 aa15.59■□□□□ 0.09
COL4A6-205ENST00000468338 NME9Q86XW9 330 aa15.59■□□□□ 0.09
COL4A6-205ENST00000468338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL4A6-205ENST00000468338 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
COL4A6-205ENST00000468338 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
COL4A6-205ENST00000468338 SPATA31A1Q5TZJ5 1347 aa15.59■□□□□ 0.09
COL4A6-205ENST00000468338 COL5A2P05997 1499 aaPredicted RBP15.58■□□□□ 0.08
COL4A6-205ENST00000468338 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL4A6-205ENST00000468338 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
COL4A6-205ENST00000468338 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
COL4A6-205ENST00000468338 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
COL4A6-205ENST00000468338 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
COL4A6-205ENST00000468338 STRN4Q9NRL3 753 aa15.56■□□□□ 0.08
COL4A6-205ENST00000468338 AXIN2Q9Y2T1 843 aa15.56■□□□□ 0.08
COL4A6-205ENST00000468338 THSD7AQ9UPZ6 1657 aa15.56■□□□□ 0.08
COL4A6-205ENST00000468338 ABCC6O95255 1503 aa15.55■□□□□ 0.08
COL4A6-205ENST00000468338 EVA1CP58658 441 aa15.55■□□□□ 0.08
COL4A6-205ENST00000468338 BARGINQ6ZT62 677 aa15.55■□□□□ 0.08
COL4A6-205ENST00000468338 HSPA5P11021 654 aaKnown RBP15.54■□□□□ 0.08
COL4A6-205ENST00000468338 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
COL4A6-205ENST00000468338 MYOM1P52179 1685 aa15.54■□□□□ 0.08
COL4A6-205ENST00000468338 KRT27Q7Z3Y8 459 aa15.53■□□□□ 0.08
COL4A6-205ENST00000468338 THRAP3Q9Y2W1 955 aaKnown RBP15.53■□□□□ 0.08
COL4A6-205ENST00000468338 EP400Q96L91 3159 aa15.52■□□□□ 0.08
COL4A6-205ENST00000468338 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
COL4A6-205ENST00000468338 CCDC125Q86Z20 511 aa15.52■□□□□ 0.08
COL4A6-205ENST00000468338 TCP11L2Q8N4U5 519 aa15.52■□□□□ 0.08
COL4A6-205ENST00000468338 CRB1P82279 1406 aa15.51■□□□□ 0.07
COL4A6-205ENST00000468338 FYB1O15117 783 aa15.51■□□□□ 0.07
COL4A6-205ENST00000468338 CARD14Q9BXL6 1004 aa15.51■□□□□ 0.07
COL4A6-205ENST00000468338 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
COL4A6-205ENST00000468338 SOX12O15370 315 aa15.5■□□□□ 0.07
COL4A6-205ENST00000468338 LTN1O94822 1766 aa15.49■□□□□ 0.07
COL4A6-205ENST00000468338 ZBTB7CA1YPR0 619 aa15.49■□□□□ 0.07
COL4A6-205ENST00000468338 COG3Q96JB2 828 aa15.49■□□□□ 0.07
COL4A6-205ENST00000468338 USP35Q9P2H5 1018 aa15.49■□□□□ 0.07
COL4A6-205ENST00000468338 BLMP54132 1417 aaPredicted RBP15.48■□□□□ 0.07
COL4A6-205ENST00000468338 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-205ENST00000468338 GSE1Q14687 1217 aa15.47■□□□□ 0.07
COL4A6-205ENST00000468338 CARD10Q9BWT7 1032 aa15.47■□□□□ 0.07
COL4A6-205ENST00000468338 ERBB3P21860 1342 aa15.46■□□□□ 0.07
COL4A6-205ENST00000468338 A0A0G2JS52 829 aa15.46■□□□□ 0.07
COL4A6-205ENST00000468338 MYT1Q01538 1121 aa15.46■□□□□ 0.07
COL4A6-205ENST00000468338 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.07
COL4A6-205ENST00000468338 IP6K1Q92551 441 aa15.46■□□□□ 0.07
COL4A6-205ENST00000468338 PARP4Q9UKK3 1724 aaKnown RBP15.46■□□□□ 0.06
COL4A6-205ENST00000468338 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
COL4A6-205ENST00000468338 GGNBP2Q9H3C7 697 aa15.45■□□□□ 0.06
COL4A6-205ENST00000468338 TSHZ2Q9NRE2 1034 aa15.45■□□□□ 0.06
COL4A6-205ENST00000468338 KIF20BQ96Q89 1820 aa15.45■□□□□ 0.06
COL4A6-205ENST00000468338 NSD3Q9BZ95 1437 aa15.44■□□□□ 0.06
COL4A6-205ENST00000468338 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
COL4A6-205ENST00000468338 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
COL4A6-205ENST00000468338 FBLN1P23142 703 aa15.43■□□□□ 0.06
COL4A6-205ENST00000468338 CDCA7Q9BWT1 371 aaPredicted RBP15.43■□□□□ 0.06
COL4A6-205ENST00000468338 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
COL4A6-205ENST00000468338 WNK3Q9BYP7 1800 aa15.43■□□□□ 0.06
COL4A6-205ENST00000468338 FAM182BQ5T319 152 aa15.42■□□□□ 0.06
COL4A6-205ENST00000468338 FAM196AQ6ZSG2 479 aa15.42■□□□□ 0.06
COL4A6-205ENST00000468338 CSB-PGBD3P0DP91 1061 aa15.41■□□□□ 0.06
COL4A6-205ENST00000468338 HOXC9P31274 260 aa15.41■□□□□ 0.06
COL4A6-205ENST00000468338 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-205ENST00000468338 ANKRD24Q8TF21 1146 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms