RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 NLGN2Q8NFZ4 835 aa17.78■□□□□ 0.44
VPS26A-204ENST00000467852 PHRF1Q9P1Y6 1649 aaKnown RBP17.77■□□□□ 0.44
VPS26A-204ENST00000467852 SLC16A10Q8TF71 515 aa17.76■□□□□ 0.43
VPS26A-204ENST00000467852 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
VPS26A-204ENST00000467852 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
VPS26A-204ENST00000467852 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
VPS26A-204ENST00000467852 POGKQ9P215 609 aa17.73■□□□□ 0.43
VPS26A-204ENST00000467852 BCL9O00512 1426 aa17.72■□□□□ 0.43
VPS26A-204ENST00000467852 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
VPS26A-204ENST00000467852 AKAP12Q02952 1782 aa17.72■□□□□ 0.43
VPS26A-204ENST00000467852 TOPAZ1Q8N9V7 1692 aa17.72■□□□□ 0.43
VPS26A-204ENST00000467852 ADCY9O60503 1353 aa17.72■□□□□ 0.43
VPS26A-204ENST00000467852 EIF3AQ14152 1382 aaKnown RBP17.72■□□□□ 0.43
VPS26A-204ENST00000467852 KIF3CO14782 793 aa17.72■□□□□ 0.43
VPS26A-204ENST00000467852 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
VPS26A-204ENST00000467852 MARCH10Q8NA82 808 aaPredicted RBP17.72■□□□□ 0.43
VPS26A-204ENST00000467852 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
VPS26A-204ENST00000467852 CRB1P82279 1406 aa17.71■□□□□ 0.43
VPS26A-204ENST00000467852 ITGAEP38570 1179 aa17.7■□□□□ 0.42
VPS26A-204ENST00000467852 LMO7Q8WWI1 1683 aa17.7■□□□□ 0.42
VPS26A-204ENST00000467852 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
VPS26A-204ENST00000467852 JMYQ8N9B5 988 aa17.69■□□□□ 0.42
VPS26A-204ENST00000467852 KLRG1Q96E93 195 aa17.69■□□□□ 0.42
VPS26A-204ENST00000467852 WWC3Q9ULE0 1092 aa17.69■□□□□ 0.42
VPS26A-204ENST00000467852 CPDO75976 1380 aa17.68■□□□□ 0.42
VPS26A-204ENST00000467852 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
VPS26A-204ENST00000467852 PIK3C2GO75747 1445 aa17.67■□□□□ 0.42
VPS26A-204ENST00000467852 COL5A2P05997 1499 aaPredicted RBP17.67■□□□□ 0.42
VPS26A-204ENST00000467852 PRR36Q9H6K5 1346 aa17.67■□□□□ 0.42
VPS26A-204ENST00000467852 TOMM70O94826 608 aa17.66■□□□□ 0.42
VPS26A-204ENST00000467852 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
VPS26A-204ENST00000467852 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
VPS26A-204ENST00000467852 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
VPS26A-204ENST00000467852 WDR90Q96KV7 1748 aa17.66■□□□□ 0.42
VPS26A-204ENST00000467852 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
VPS26A-204ENST00000467852 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
VPS26A-204ENST00000467852 ZBTB22O15209 634 aa17.64■□□□□ 0.41
VPS26A-204ENST00000467852 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
VPS26A-204ENST00000467852 C14orf93Q9H972 538 aaKnown RBP17.64■□□□□ 0.41
VPS26A-204ENST00000467852 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
VPS26A-204ENST00000467852 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
VPS26A-204ENST00000467852 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
VPS26A-204ENST00000467852 PCNTO95613 3336 aa17.62■□□□□ 0.41
VPS26A-204ENST00000467852 WASLO00401 505 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-204ENST00000467852 EXOC5O00471 708 aa17.61■□□□□ 0.41
VPS26A-204ENST00000467852 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
VPS26A-204ENST00000467852 WNK3Q9BYP7 1800 aa17.59■□□□□ 0.41
VPS26A-204ENST00000467852 ZBTB7CA1YPR0 619 aa17.59■□□□□ 0.41
VPS26A-204ENST00000467852 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
VPS26A-204ENST00000467852 ITSN1Q15811 1721 aa17.58■□□□□ 0.41
VPS26A-204ENST00000467852 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
VPS26A-204ENST00000467852 GCP02774 474 aa17.58■□□□□ 0.4
VPS26A-204ENST00000467852 CFAP70Q5T0N1 1121 aa17.58■□□□□ 0.4
VPS26A-204ENST00000467852 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.4
VPS26A-204ENST00000467852 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.4
VPS26A-204ENST00000467852 HTRA3P83110 453 aa17.57■□□□□ 0.4
VPS26A-204ENST00000467852 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
VPS26A-204ENST00000467852 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
VPS26A-204ENST00000467852 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
VPS26A-204ENST00000467852 USP19O94966 1318 aa17.56■□□□□ 0.4
VPS26A-204ENST00000467852 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
VPS26A-204ENST00000467852 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-204ENST00000467852 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
VPS26A-204ENST00000467852 CD2APQ9Y5K6 639 aa17.55■□□□□ 0.4
VPS26A-204ENST00000467852 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
VPS26A-204ENST00000467852 NUDT16Q96DE0 195 aaKnown RBP17.54■□□□□ 0.4
VPS26A-204ENST00000467852 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
VPS26A-204ENST00000467852 BTAF1O14981 1849 aa17.52■□□□□ 0.4
VPS26A-204ENST00000467852 SLC27A3Q5K4L6 730 aa17.52■□□□□ 0.4
VPS26A-204ENST00000467852 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.4
VPS26A-204ENST00000467852 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
VPS26A-204ENST00000467852 USP6P35125 1406 aa17.51■□□□□ 0.39
VPS26A-204ENST00000467852 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
VPS26A-204ENST00000467852 ACEP12821 1306 aa17.5■□□□□ 0.39
VPS26A-204ENST00000467852 TUBGCP6Q96RT7 1819 aa17.5■□□□□ 0.39
VPS26A-204ENST00000467852 HSPA1AP0DMV8 641 aaKnown RBP17.5■□□□□ 0.39
VPS26A-204ENST00000467852 HSPA1BP0DMV9 641 aaKnown RBP17.5■□□□□ 0.39
VPS26A-204ENST00000467852 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
VPS26A-204ENST00000467852 FSTL1Q12841 308 aa17.48■□□□□ 0.39
VPS26A-204ENST00000467852 CARD10Q9BWT7 1032 aa17.48■□□□□ 0.39
VPS26A-204ENST00000467852 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
VPS26A-204ENST00000467852 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
VPS26A-204ENST00000467852 TNS2Q63HR2 1409 aa17.46■□□□□ 0.39
VPS26A-204ENST00000467852 NMRK2Q9NPI5 230 aa17.45■□□□□ 0.38
VPS26A-204ENST00000467852 MSL1Q68DK7 614 aa17.44■□□□□ 0.38
VPS26A-204ENST00000467852 AXIN2Q9Y2T1 843 aa17.44■□□□□ 0.38
VPS26A-204ENST00000467852 CCDC61Q9Y6R9 512 aa17.43■□□□□ 0.38
VPS26A-204ENST00000467852 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
VPS26A-204ENST00000467852 PLEKHG3A1L390 1219 aa17.42■□□□□ 0.38
VPS26A-204ENST00000467852 COL23A1Q86Y22 540 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-204ENST00000467852 FOXD4L1Q9NU39 408 aa17.42■□□□□ 0.38
VPS26A-204ENST00000467852 COL18A1P39060 1754 aa17.42■□□□□ 0.38
VPS26A-204ENST00000467852 TRPM1Q7Z4N2 1603 aa17.42■□□□□ 0.38
VPS26A-204ENST00000467852 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
VPS26A-204ENST00000467852 RGPD5Q99666 1765 aa17.4■□□□□ 0.38
VPS26A-204ENST00000467852 KCNQ4P56696 695 aa17.4■□□□□ 0.38
VPS26A-204ENST00000467852 NLRP6P59044 892 aa17.4■□□□□ 0.38
VPS26A-204ENST00000467852 FAM161AQ3B820 660 aa17.4■□□□□ 0.38
VPS26A-204ENST00000467852 CDK19Q9BWU1 502 aa17.4■□□□□ 0.38
VPS26A-204ENST00000467852 ABCC6O95255 1503 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms