RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
CCHCR1-211ENST00000467553 EZH2Q15910 746 aaKnown RBP19.79■□□□□ 0.76
CCHCR1-211ENST00000467553 ABCC6O95255 1503 aa19.79■□□□□ 0.76
CCHCR1-211ENST00000467553 WDR17Q8IZU2 1322 aa19.78■□□□□ 0.76
CCHCR1-211ENST00000467553 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
CCHCR1-211ENST00000467553 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
CCHCR1-211ENST00000467553 MON2Q7Z3U7 1717 aa19.76■□□□□ 0.75
CCHCR1-211ENST00000467553 ZBTB7CA1YPR0 619 aa19.76■□□□□ 0.75
CCHCR1-211ENST00000467553 PSDA5PKW4 1024 aaPredicted RBP19.76■□□□□ 0.75
CCHCR1-211ENST00000467553 OVOS2A0A0G2JMS6 1433 aa19.76■□□□□ 0.75
CCHCR1-211ENST00000467553 OVOS2A0A0J9YW53 1432 aa19.76■□□□□ 0.75
CCHCR1-211ENST00000467553 OVOS2Q6IE36 1432 aa19.76■□□□□ 0.75
CCHCR1-211ENST00000467553 USP31Q70CQ4 1352 aa19.75■□□□□ 0.75
CCHCR1-211ENST00000467553 DDB1Q16531 1140 aa19.75■□□□□ 0.75
CCHCR1-211ENST00000467553 NBPF14Q5TI25 921 aa19.74■□□□□ 0.75
CCHCR1-211ENST00000467553 HDGFL2Q7Z4V5 671 aaPredicted RBP19.74■□□□□ 0.75
CCHCR1-211ENST00000467553 CARD10Q9BWT7 1032 aa19.74■□□□□ 0.75
CCHCR1-211ENST00000467553 AXIN2Q9Y2T1 843 aa19.74■□□□□ 0.75
CCHCR1-211ENST00000467553 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
CCHCR1-211ENST00000467553 RREB1Q92766 1687 aa19.74■□□□□ 0.75
CCHCR1-211ENST00000467553 R3HDM1Q15032 1099 aaKnown RBP19.73■□□□□ 0.75
CCHCR1-211ENST00000467553 BCL9O00512 1426 aa19.73■□□□□ 0.75
CCHCR1-211ENST00000467553 NFAT5O94916 1531 aa19.72■□□□□ 0.75
CCHCR1-211ENST00000467553 WNK3Q9BYP7 1800 aa19.72■□□□□ 0.75
CCHCR1-211ENST00000467553 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
CCHCR1-211ENST00000467553 PEAK1Q9H792 1746 aa19.72■□□□□ 0.75
CCHCR1-211ENST00000467553 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
CCHCR1-211ENST00000467553 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
CCHCR1-211ENST00000467553 CCDC7Q96M83 1385 aa19.71■□□□□ 0.75
CCHCR1-211ENST00000467553 PLSCR1O15162 318 aa19.71■□□□□ 0.75
CCHCR1-211ENST00000467553 TESK2Q96S53 571 aa19.71■□□□□ 0.75
CCHCR1-211ENST00000467553 TERF2IPQ9NYB0 399 aa19.71■□□□□ 0.75
CCHCR1-211ENST00000467553 LRRC37A3O60309 1634 aa19.71■□□□□ 0.75
CCHCR1-211ENST00000467553 USP47Q96K76 1375 aa19.7■□□□□ 0.74
CCHCR1-211ENST00000467553 NINLQ9Y2I6 1382 aa19.7■□□□□ 0.74
CCHCR1-211ENST00000467553 RGPD5Q99666 1765 aa19.7■□□□□ 0.74
CCHCR1-211ENST00000467553 SBF2Q86WG5 1849 aa19.7■□□□□ 0.74
CCHCR1-211ENST00000467553 CSB-PGBD3P0DP91 1061 aa19.7■□□□□ 0.74
CCHCR1-211ENST00000467553 EDC4Q6P2E9 1401 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-211ENST00000467553 CD163L1Q9NR16 1453 aa19.69■□□□□ 0.74
CCHCR1-211ENST00000467553 NUP188Q5SRE5 1749 aa19.69■□□□□ 0.74
CCHCR1-211ENST00000467553 BCL11BQ9C0K0 894 aaPredicted RBP19.68■□□□□ 0.74
CCHCR1-211ENST00000467553 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
CCHCR1-211ENST00000467553 EXOC5O00471 708 aa19.67■□□□□ 0.74
CCHCR1-211ENST00000467553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCHCR1-211ENST00000467553 SOX12O15370 315 aa19.66■□□□□ 0.74
CCHCR1-211ENST00000467553 TMF1P82094 1093 aa19.65■□□□□ 0.74
CCHCR1-211ENST00000467553 MARCH10Q8NA82 808 aaPredicted RBP19.64■□□□□ 0.73
CCHCR1-211ENST00000467553 ERBB3P21860 1342 aa19.63■□□□□ 0.73
CCHCR1-211ENST00000467553 NME9Q86XW9 330 aa19.63■□□□□ 0.73
CCHCR1-211ENST00000467553 LTN1O94822 1766 aa19.62■□□□□ 0.73
CCHCR1-211ENST00000467553 A0A1W2PP64 1363 aa19.62■□□□□ 0.73
CCHCR1-211ENST00000467553 TNS2Q63HR2 1409 aa19.6■□□□□ 0.73
CCHCR1-211ENST00000467553 IL2RBP14784 551 aa19.58■□□□□ 0.72
CCHCR1-211ENST00000467553 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCHCR1-211ENST00000467553 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
CCHCR1-211ENST00000467553 SPON1Q9HCB6 807 aa19.58■□□□□ 0.72
CCHCR1-211ENST00000467553 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.72
CCHCR1-211ENST00000467553 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
CCHCR1-211ENST00000467553 IP6K1Q92551 441 aa19.57■□□□□ 0.72
CCHCR1-211ENST00000467553 FAM208AQ9UK61 1670 aaKnown RBP19.56■□□□□ 0.72
CCHCR1-211ENST00000467553 HSPA5P11021 654 aaKnown RBP19.56■□□□□ 0.72
CCHCR1-211ENST00000467553 COG3Q96JB2 828 aa19.56■□□□□ 0.72
CCHCR1-211ENST00000467553 KCNQ2O43526 872 aa19.55■□□□□ 0.72
CCHCR1-211ENST00000467553 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
CCHCR1-211ENST00000467553 ANKRD36BQ8N2N9 1353 aa19.55■□□□□ 0.72
CCHCR1-211ENST00000467553 PROM2Q8N271 834 aa19.53■□□□□ 0.72
CCHCR1-211ENST00000467553 NHSQ6T4R5 1651 aa19.52■□□□□ 0.72
CCHCR1-211ENST00000467553 TXNRD1Q16881 649 aa19.51■□□□□ 0.71
CCHCR1-211ENST00000467553 PTF1AQ7RTS3 328 aa19.51■□□□□ 0.71
CCHCR1-211ENST00000467553 STK32BQ9NY57 414 aa19.5■□□□□ 0.71
CCHCR1-211ENST00000467553 PPP1R1BQ9UD71 204 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-211ENST00000467553 RTL1A6NKG5 1358 aa19.49■□□□□ 0.71
CCHCR1-211ENST00000467553 CASZ1Q86V15 1759 aa19.48■□□□□ 0.71
CCHCR1-211ENST00000467553 AMPHP49418 695 aa19.48■□□□□ 0.71
CCHCR1-211ENST00000467553 ANO8Q9HCE9 1232 aaPredicted RBP19.48■□□□□ 0.71
CCHCR1-211ENST00000467553 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
CCHCR1-211ENST00000467553 HOXC9P31274 260 aa19.47■□□□□ 0.71
CCHCR1-211ENST00000467553 SLC15A2Q16348 729 aa19.47■□□□□ 0.71
CCHCR1-211ENST00000467553 MAP3K19Q56UN5 1328 aa19.47■□□□□ 0.71
CCHCR1-211ENST00000467553 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
CCHCR1-211ENST00000467553 FYB1O15117 783 aa19.45■□□□□ 0.7
CCHCR1-211ENST00000467553 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
CCHCR1-211ENST00000467553 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
CCHCR1-211ENST00000467553 ACSBG1Q96GR2 724 aa19.44■□□□□ 0.7
CCHCR1-211ENST00000467553 BTAF1O14981 1849 aa19.44■□□□□ 0.7
CCHCR1-211ENST00000467553 LTV1Q96GA3 475 aaPredicted RBP19.43■□□□□ 0.7
CCHCR1-211ENST00000467553 SLC27A3Q5K4L6 730 aa19.42■□□□□ 0.7
CCHCR1-211ENST00000467553 GGNBP2Q9H3C7 697 aa19.42■□□□□ 0.7
CCHCR1-211ENST00000467553 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
CCHCR1-211ENST00000467553 DDX54Q8TDD1 881 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-211ENST00000467553 CARD14Q9BXL6 1004 aa19.41■□□□□ 0.7
CCHCR1-211ENST00000467553 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-211ENST00000467553 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-211ENST00000467553 MTFR1LQ9H019 292 aa19.4■□□□□ 0.7
CCHCR1-211ENST00000467553 KIF20BQ96Q89 1820 aa19.39■□□□□ 0.7
CCHCR1-211ENST00000467553 FBLN1P23142 703 aa19.39■□□□□ 0.69
CCHCR1-211ENST00000467553 INSRP06213 1382 aa19.38■□□□□ 0.69
CCHCR1-211ENST00000467553 MYOM1P52179 1685 aa19.38■□□□□ 0.69
CCHCR1-211ENST00000467553 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms