RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 PRR36Q9H6K5 1346 aa6.49□□□□□ -1.37
CPS1-205ENST00000467353 FMN2Q9NZ56 1722 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 GRIN3BO60391 1043 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 ITGAEP38570 1179 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 APLP1P51693 650 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 NBR1Q14596 966 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 RGL3Q3MIN7 710 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 TNS4Q8IZW8 715 aa6.48□□□□□ -1.37
CPS1-205ENST00000467353 YTHDC2Q9H6S0 1430 aaKnown RBP6.48□□□□□ -1.37
CPS1-205ENST00000467353 GOLGB1Q14789 3259 aaKnown RBP6.47□□□□□ -1.37
CPS1-205ENST00000467353 KIF3CO14782 793 aa6.47□□□□□ -1.37
CPS1-205ENST00000467353 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
CPS1-205ENST00000467353 DDB1Q16531 1140 aa6.47□□□□□ -1.37
CPS1-205ENST00000467353 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
CPS1-205ENST00000467353 NGDNQ8NEJ9 315 aaKnown RBP6.47□□□□□ -1.37
CPS1-205ENST00000467353 HIRIP3Q9BW71 556 aaPredicted RBP6.47□□□□□ -1.37
CPS1-205ENST00000467353 OVOS2A0A0G2JMS6 1433 aa6.47□□□□□ -1.37
CPS1-205ENST00000467353 OVOS2A0A0J9YW53 1432 aa6.47□□□□□ -1.37
CPS1-205ENST00000467353 OVOS2Q6IE36 1432 aa6.47□□□□□ -1.37
CPS1-205ENST00000467353 DHX57Q6P158 1386 aaKnown RBP6.46□□□□□ -1.37
CPS1-205ENST00000467353 ZNF827Q17R98 1081 aa6.46□□□□□ -1.38
CPS1-205ENST00000467353 C14orf93Q9H972 538 aaKnown RBP6.46□□□□□ -1.38
CPS1-205ENST00000467353 CHD4Q14839 1912 aa6.46□□□□□ -1.38
CPS1-205ENST00000467353 ANKARQ7Z5J8 1434 aa6.45□□□□□ -1.38
CPS1-205ENST00000467353 POLD1P28340 1107 aa6.45□□□□□ -1.38
CPS1-205ENST00000467353 CFAP70Q5T0N1 1121 aa6.45□□□□□ -1.38
CPS1-205ENST00000467353 ERICH6Q7L0X2 663 aa6.45□□□□□ -1.38
CPS1-205ENST00000467353 POGKQ9P215 609 aa6.45□□□□□ -1.38
CPS1-205ENST00000467353 ADCY9O60503 1353 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 HTRA3P83110 453 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 JMYQ8N9B5 988 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 AKT1S1Q96B36 256 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 LRRC4BQ9NT99 713 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 ATP7BP35670 1465 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 TRPM3Q9HCF6 1732 aaPredicted RBP6.44□□□□□ -1.38
CPS1-205ENST00000467353 MINK1Q8N4C8 1332 aaPredicted RBP6.44□□□□□ -1.38
CPS1-205ENST00000467353 CPDO75976 1380 aa6.44□□□□□ -1.38
CPS1-205ENST00000467353 BCL9O00512 1426 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 ALS2Q96Q42 1657 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 PEAK1Q9H792 1746 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
CPS1-205ENST00000467353 GCP02774 474 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 PLCD3Q8N3E9 789 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 SLC16A10Q8TF71 515 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 KDM2AQ9Y2K7 1162 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 AATKQ6ZMQ8 1374 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 ANKRD30BQ9BXX2 1392 aa6.43□□□□□ -1.38
CPS1-205ENST00000467353 RGPD8O14715 1765 aaPredicted RBP6.42□□□□□ -1.38
CPS1-205ENST00000467353 TOM1L2Q6ZVM7 507 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 ABTB2Q8N961 1025 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 KLRG1Q96E93 195 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 PCDH10Q9P2E7 1040 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 WWC3Q9ULE0 1092 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 PNPLA7Q6ZV29 1317 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 PIK3C2GO75747 1445 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 CRB1P82279 1406 aa6.42□□□□□ -1.38
CPS1-205ENST00000467353 COL5A2P05997 1499 aaPredicted RBP6.41□□□□□ -1.38
CPS1-205ENST00000467353 ZBTB7CA1YPR0 619 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 EXOC5O00471 708 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 TOMM70O94826 608 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 POLA2Q14181 598 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 NUDT16Q96DE0 195 aaKnown RBP6.41□□□□□ -1.38
CPS1-205ENST00000467353 ACSBG1Q96GR2 724 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 AXIN2Q9Y2T1 843 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 SPATA31E1Q6ZUB1 1445 aa6.41□□□□□ -1.38
CPS1-205ENST00000467353 CRYBG1Q9Y4K1 1723 aa6.4□□□□□ -1.38
CPS1-205ENST00000467353 RGPD3A6NKT7 1758 aaPredicted RBP6.4□□□□□ -1.38
CPS1-205ENST00000467353 RGPD4Q7Z3J3 1758 aa6.4□□□□□ -1.38
CPS1-205ENST00000467353 KCNQ4P56696 695 aa6.4□□□□□ -1.38
CPS1-205ENST00000467353 CDCA7Q9BWT1 371 aaPredicted RBP6.4□□□□□ -1.38
CPS1-205ENST00000467353 ZBTB47Q9UFB7 747 aaPredicted RBP6.4□□□□□ -1.38
CPS1-205ENST00000467353 USP19O94966 1318 aa6.4□□□□□ -1.39
CPS1-205ENST00000467353 PHRF1Q9P1Y6 1649 aaKnown RBP6.39□□□□□ -1.39
CPS1-205ENST00000467353 KIF1BO60333 1816 aa6.39□□□□□ -1.39
CPS1-205ENST00000467353 NLRP13Q86W25 1043 aa6.39□□□□□ -1.39
CPS1-205ENST00000467353 TFCP2L1Q9NZI6 479 aa6.39□□□□□ -1.39
CPS1-205ENST00000467353 ACEP12821 1306 aa6.39□□□□□ -1.39
CPS1-205ENST00000467353 PPLO60437 1756 aa6.39□□□□□ -1.39
CPS1-205ENST00000467353 CARD10Q9BWT7 1032 aa6.38□□□□□ -1.39
CPS1-205ENST00000467353 NMRK2Q9NPI5 230 aa6.38□□□□□ -1.39
CPS1-205ENST00000467353 CD2APQ9Y5K6 639 aa6.38□□□□□ -1.39
CPS1-205ENST00000467353 EIF3AQ14152 1382 aaKnown RBP6.38□□□□□ -1.39
CPS1-205ENST00000467353 LMO7Q8WWI1 1683 aa6.38□□□□□ -1.39
CPS1-205ENST00000467353 IFT172Q9UG01 1749 aa6.38□□□□□ -1.39
CPS1-205ENST00000467353 PARP4Q9UKK3 1724 aaKnown RBP6.38□□□□□ -1.39
CPS1-205ENST00000467353 KNDC1Q76NI1 1749 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 TULP4Q9NRJ4 1543 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 USP6P35125 1406 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 POLR3AO14802 1390 aaPredicted RBP6.37□□□□□ -1.39
CPS1-205ENST00000467353 WDR17Q8IZU2 1322 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 PLEKHG3A1L390 1219 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 COL23A1Q86Y22 540 aaPredicted RBP6.37□□□□□ -1.39
CPS1-205ENST00000467353 CDK19Q9BWU1 502 aa6.37□□□□□ -1.39
CPS1-205ENST00000467353 HSPA1AP0DMV8 641 aaKnown RBP6.36□□□□□ -1.39
CPS1-205ENST00000467353 HSPA1BP0DMV9 641 aaKnown RBP6.36□□□□□ -1.39
CPS1-205ENST00000467353 SLC27A3Q5K4L6 730 aa6.36□□□□□ -1.39
CPS1-205ENST00000467353 RBM46Q8TBY0 533 aaKnown RBP6.36□□□□□ -1.39
CPS1-205ENST00000467353 CCDC61Q9Y6R9 512 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms