RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 NFAT5O94916 1531 aa27.25■■□□□ 1.95
GMDS-203ENST00000467288 BARGINQ6ZT62 677 aa27.24■■□□□ 1.95
GMDS-203ENST00000467288 USP35Q9P2H5 1018 aa27.22■■□□□ 1.95
GMDS-203ENST00000467288 SOX12O15370 315 aa27.21■■□□□ 1.95
GMDS-203ENST00000467288 EN1Q05925 392 aaPredicted RBP27.21■■□□□ 1.95
GMDS-203ENST00000467288 AXIN2Q9Y2T1 843 aa27.21■■□□□ 1.95
GMDS-203ENST00000467288 CRB1P82279 1406 aa27.2■■□□□ 1.94
GMDS-203ENST00000467288 CDCA8Q53HL2 280 aa27.2■■□□□ 1.94
GMDS-203ENST00000467288 TCP11L2Q8N4U5 519 aa27.2■■□□□ 1.94
GMDS-203ENST00000467288 THRAP3Q9Y2W1 955 aaKnown RBP27.2■■□□□ 1.94
GMDS-203ENST00000467288 ANKRD36BQ8N2N9 1353 aa27.2■■□□□ 1.94
GMDS-203ENST00000467288 PSDA5PKW4 1024 aaPredicted RBP27.19■■□□□ 1.94
GMDS-203ENST00000467288 OVOS2A0A0J9YW53 1432 aa27.17■■□□□ 1.94
GMDS-203ENST00000467288 OVOS2Q6IE36 1432 aa27.17■■□□□ 1.94
GMDS-203ENST00000467288 ABCC6O95255 1503 aa27.16■■□□□ 1.94
GMDS-203ENST00000467288 WDR17Q8IZU2 1322 aa27.16■■□□□ 1.94
GMDS-203ENST00000467288 TOM1L2Q6ZVM7 507 aa27.13■■□□□ 1.93
GMDS-203ENST00000467288 RGPD5Q99666 1765 aa27.12■■□□□ 1.93
GMDS-203ENST00000467288 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
GMDS-203ENST00000467288 TRIM37O94972 964 aa27.1■■□□□ 1.93
GMDS-203ENST00000467288 EZH2Q15910 746 aaKnown RBP27.09■■□□□ 1.93
GMDS-203ENST00000467288 PARP4Q9UKK3 1724 aaKnown RBP27.09■■□□□ 1.93
GMDS-203ENST00000467288 EIF4G2P78344 907 aaKnown RBP eCLIP27.08■■□□□ 1.93
GMDS-203ENST00000467288 PDE3BQ13370 1112 aa27.08■■□□□ 1.93
GMDS-203ENST00000467288 LTN1O94822 1766 aa27.07■■□□□ 1.92
GMDS-203ENST00000467288 R3HDM1Q15032 1099 aaKnown RBP27.07■■□□□ 1.92
GMDS-203ENST00000467288 COG3Q96JB2 828 aa27.07■■□□□ 1.92
GMDS-203ENST00000467288 CARD10Q9BWT7 1032 aa27.07■■□□□ 1.92
GMDS-203ENST00000467288 MYOM1P52179 1685 aa27.07■■□□□ 1.92
GMDS-203ENST00000467288 CSB-PGBD3P0DP91 1061 aa27.06■■□□□ 1.92
GMDS-203ENST00000467288 CAMKK2Q96RR4 588 aa27.06■■□□□ 1.92
GMDS-203ENST00000467288 FYB1O15117 783 aa27.05■■□□□ 1.92
GMDS-203ENST00000467288 APBA3O96018 575 aa27.05■■□□□ 1.92
GMDS-203ENST00000467288 HSPA5P11021 654 aaKnown RBP27.05■■□□□ 1.92
GMDS-203ENST00000467288 DISP2A7MBM2 1401 aa27.05■■□□□ 1.92
GMDS-203ENST00000467288 ERBB3P21860 1342 aa27.04■■□□□ 1.92
GMDS-203ENST00000467288 RGPD1P0DJD0 1748 aa27.04■■□□□ 1.92
GMDS-203ENST00000467288 CDCA7Q9BWT1 371 aaPredicted RBP27.02■■□□□ 1.92
GMDS-203ENST00000467288 WNK3Q9BYP7 1800 aa27.02■■□□□ 1.92
GMDS-203ENST00000467288 CCDC7Q96M83 1385 aa27.01■■□□□ 1.91
GMDS-203ENST00000467288 CARD14Q9BXL6 1004 aa27.01■■□□□ 1.91
GMDS-203ENST00000467288 LRRC37A3O60309 1634 aa27.01■■□□□ 1.91
GMDS-203ENST00000467288 IP6K1Q92551 441 aa27■■□□□ 1.91
GMDS-203ENST00000467288 GGNBP2Q9H3C7 697 aa27■■□□□ 1.91
GMDS-203ENST00000467288 DDB1Q16531 1140 aa26.99■■□□□ 1.91
GMDS-203ENST00000467288 TNS1Q9HBL0 1735 aaKnown RBP26.99■■□□□ 1.91
GMDS-203ENST00000467288 MAP3K19Q56UN5 1328 aa26.98■■□□□ 1.91
GMDS-203ENST00000467288 ANKRD24Q8TF21 1146 aa26.98■■□□□ 1.91
GMDS-203ENST00000467288 FBLN1P23142 703 aa26.97■■□□□ 1.91
GMDS-203ENST00000467288 NSD3Q9BZ95 1437 aa26.97■■□□□ 1.91
GMDS-203ENST00000467288 C11orf95C9JLR9 678 aaPredicted RBP26.96■■□□□ 1.91
GMDS-203ENST00000467288 NLRP2Q9NX02 1062 aa26.96■■□□□ 1.91
GMDS-203ENST00000467288 KIF20BQ96Q89 1820 aa26.95■■□□□ 1.91
GMDS-203ENST00000467288 PEAK1Q9H792 1746 aa26.95■■□□□ 1.9
GMDS-203ENST00000467288 OVOS2A0A0G2JMS6 1433 aa26.94■■□□□ 1.9
GMDS-203ENST00000467288 LRP5O75197 1615 aa26.94■■□□□ 1.9
GMDS-203ENST00000467288 HOXC9P31274 260 aa26.93■■□□□ 1.9
GMDS-203ENST00000467288 PARD3Q8TEW0 1356 aa26.93■■□□□ 1.9
GMDS-203ENST00000467288 AMPHP49418 695 aa26.92■■□□□ 1.9
GMDS-203ENST00000467288 POLR3GLQ9BT43 218 aa26.92■■□□□ 1.9
GMDS-203ENST00000467288 MARCH10Q8NA82 808 aaPredicted RBP26.91■■□□□ 1.9
GMDS-203ENST00000467288 RTL1A6NKG5 1358 aa26.91■■□□□ 1.9
GMDS-203ENST00000467288 EXOC5O00471 708 aa26.9■■□□□ 1.9
GMDS-203ENST00000467288 RRS1Q15050 365 aaKnown RBP26.9■■□□□ 1.9
GMDS-203ENST00000467288 BCL9O00512 1426 aa26.89■■□□□ 1.89
GMDS-203ENST00000467288 FAM208AQ9UK61 1670 aaKnown RBP26.89■■□□□ 1.89
GMDS-203ENST00000467288 IL2RBP14784 551 aa26.88■■□□□ 1.89
GMDS-203ENST00000467288 LTV1Q96GA3 475 aaPredicted RBP26.88■■□□□ 1.89
GMDS-203ENST00000467288 TNS2Q63HR2 1409 aa26.88■■□□□ 1.89
GMDS-203ENST00000467288 NBPF14Q5TI25 921 aa26.87■■□□□ 1.89
GMDS-203ENST00000467288 CGNL1Q0VF96 1302 aa26.87■■□□□ 1.89
GMDS-203ENST00000467288 KIF24Q5T7B8 1368 aa26.84■■□□□ 1.89
GMDS-203ENST00000467288 SBF2Q86WG5 1849 aa26.84■■□□□ 1.89
GMDS-203ENST00000467288 PANK3Q9H999 370 aa26.82■■□□□ 1.88
GMDS-203ENST00000467288 INSRP06213 1382 aa26.81■■□□□ 1.88
GMDS-203ENST00000467288 BCL11BQ9C0K0 894 aaPredicted RBP26.8■■□□□ 1.88
GMDS-203ENST00000467288 FLT4P35916 1363 aa26.8■■□□□ 1.88
GMDS-203ENST00000467288 HSP90AB2PQ58FF8 381 aa26.79■■□□□ 1.88
GMDS-203ENST00000467288 PTF1AQ7RTS3 328 aa26.78■■□□□ 1.88
GMDS-203ENST00000467288 RGPD2P0DJD1 1756 aa26.78■■□□□ 1.88
GMDS-203ENST00000467288 RREB1Q92766 1687 aa26.77■■□□□ 1.88
GMDS-203ENST00000467288 PLSCR1O15162 318 aa26.77■■□□□ 1.88
GMDS-203ENST00000467288 EMILIN1Q9Y6C2 1016 aa26.77■■□□□ 1.88
GMDS-203ENST00000467288 SMG6Q86US8 1419 aaKnown RBP26.76■■□□□ 1.87
GMDS-203ENST00000467288 NBPF6Q5VWK0 638 aa26.76■■□□□ 1.87
GMDS-203ENST00000467288 NBPF4Q96M43 638 aa26.76■■□□□ 1.87
GMDS-203ENST00000467288 KIF7Q2M1P5 1343 aa26.75■■□□□ 1.87
GMDS-203ENST00000467288 ANKRD26Q9UPS8 1709 aa26.75■■□□□ 1.87
GMDS-203ENST00000467288 RGPD3A6NKT7 1758 aaPredicted RBP26.73■■□□□ 1.87
GMDS-203ENST00000467288 RGPD4Q7Z3J3 1758 aa26.73■■□□□ 1.87
GMDS-203ENST00000467288 NUP188Q5SRE5 1749 aa26.72■■□□□ 1.87
GMDS-203ENST00000467288 NSD2O96028 1365 aa26.71■■□□□ 1.87
GMDS-203ENST00000467288 WASHC2AQ641Q2 1341 aa26.71■■□□□ 1.87
GMDS-203ENST00000467288 MEGF6O75095 1541 aa26.71■■□□□ 1.87
GMDS-203ENST00000467288 PROM2Q8N271 834 aa26.71■■□□□ 1.87
GMDS-203ENST00000467288 SPON1Q9HCB6 807 aa26.71■■□□□ 1.87
GMDS-203ENST00000467288 POLKQ9UBT6 870 aa26.71■■□□□ 1.87
GMDS-203ENST00000467288 MAP2P11137 1827 aaKnown RBP26.7■■□□□ 1.87
GMDS-203ENST00000467288 KCNQ2O43526 872 aa26.7■■□□□ 1.86
GMDS-203ENST00000467288 NHSQ6T4R5 1651 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms