RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 CDV3Q9UKY7 258 aaKnown RBP11.2□□□□□ -0.62
ATG3-204ENST00000467275 GPSM3Q9Y4H4 160 aa11.2□□□□□ -0.62
ATG3-204ENST00000467275 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
ATG3-204ENST00000467275 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
ATG3-204ENST00000467275 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
ATG3-204ENST00000467275 UPP2O95045 317 aa11.18□□□□□ -0.62
ATG3-204ENST00000467275 LCE2AQ5TA79 106 aaPredicted RBP11.18□□□□□ -0.62
ATG3-204ENST00000467275 KCTD15Q96SI1 283 aaPredicted RBP11.18□□□□□ -0.62
ATG3-204ENST00000467275 C6orf118Q5T5N4 469 aa11.17□□□□□ -0.62
ATG3-204ENST00000467275 ADAM32Q8TC27 787 aa11.17□□□□□ -0.62
ATG3-204ENST00000467275 OCSTAMPQ9BR26 566 aa11.16□□□□□ -0.62
ATG3-204ENST00000467275 BMP2P12643 396 aa11.15□□□□□ -0.62
ATG3-204ENST00000467275 MEIOBQ8N635 442 aa11.15□□□□□ -0.62
ATG3-204ENST00000467275 PGPEP1Q9NXJ5 209 aa11.15□□□□□ -0.62
ATG3-204ENST00000467275 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
ATG3-204ENST00000467275 PPP1R26Q5T8A7 1209 aaPredicted RBP11.14□□□□□ -0.63
ATG3-204ENST00000467275 LINC00528Q8N1L1 170 aa11.14□□□□□ -0.63
ATG3-204ENST00000467275 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
ATG3-204ENST00000467275 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
ATG3-204ENST00000467275 DHX9Q08211 1270 aaKnown RBP11.13□□□□□ -0.63
ATG3-204ENST00000467275 DZIP3Q86Y13 1208 aaKnown RBP11.13□□□□□ -0.63
ATG3-204ENST00000467275 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
ATG3-204ENST00000467275 SOBPA7XYQ1 873 aa11.11□□□□□ -0.63
ATG3-204ENST00000467275 MAN1A2O60476 641 aa11.11□□□□□ -0.63
ATG3-204ENST00000467275 INTS6LQ5JSJ4 861 aaKnown RBP11.11□□□□□ -0.63
ATG3-204ENST00000467275 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
ATG3-204ENST00000467275 RAB15P59190 212 aa11.09□□□□□ -0.63
ATG3-204ENST00000467275 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
ATG3-204ENST00000467275 VEGFBP49765 207 aa11.08□□□□□ -0.64
ATG3-204ENST00000467275 CBLBQ13191 982 aa11.08□□□□□ -0.64
ATG3-204ENST00000467275 GJD4Q96KN9 370 aaPredicted RBP11.08□□□□□ -0.64
ATG3-204ENST00000467275 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
ATG3-204ENST00000467275 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
ATG3-204ENST00000467275 Q6ZVU0 165 aa11.06□□□□□ -0.64
ATG3-204ENST00000467275 WIPF1O43516 503 aa11.05□□□□□ -0.64
ATG3-204ENST00000467275 LCE2CQ5TA81 110 aa11.05□□□□□ -0.64
ATG3-204ENST00000467275 IRF7Q92985 503 aa11.05□□□□□ -0.64
ATG3-204ENST00000467275 SOS2Q07890 1332 aaPredicted RBP11.05□□□□□ -0.64
ATG3-204ENST00000467275 H3BM21 787 aa11.04□□□□□ -0.64
ATG3-204ENST00000467275 TMPRSS4Q9NRS4 437 aa11.03□□□□□ -0.64
ATG3-204ENST00000467275 PCDHB9Q9Y5E1 797 aa11.03□□□□□ -0.64
ATG3-204ENST00000467275 TTLL8A6PVC2 850 aa11.02□□□□□ -0.65
ATG3-204ENST00000467275 ERVH48-1M5A8F1 160 aa11.02□□□□□ -0.65
ATG3-204ENST00000467275 APBB1O00213 710 aa11.02□□□□□ -0.65
ATG3-204ENST00000467275 FBXO45P0C2W1 286 aa11.02□□□□□ -0.65
ATG3-204ENST00000467275 INSM1Q01101 510 aaPredicted RBP11.01□□□□□ -0.65
ATG3-204ENST00000467275 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
ATG3-204ENST00000467275 MTMR14Q8NCE2 650 aa11.01□□□□□ -0.65
ATG3-204ENST00000467275 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
ATG3-204ENST00000467275 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
ATG3-204ENST00000467275 ESPNB1AK53 854 aa11□□□□□ -0.65
ATG3-204ENST00000467275 SPINT1O43278 529 aa11□□□□□ -0.65
ATG3-204ENST00000467275 RELBQ01201 579 aa11□□□□□ -0.65
ATG3-204ENST00000467275 SNRKQ9NRH2 765 aa11□□□□□ -0.65
ATG3-204ENST00000467275 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
ATG3-204ENST00000467275 FIGNL2A6NMB9 653 aa10.99□□□□□ -0.65
ATG3-204ENST00000467275 SOCS7O14512 581 aa10.99□□□□□ -0.65
ATG3-204ENST00000467275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.99□□□□□ -0.653e-6■□□□□ 10.4
ATG3-204ENST00000467275 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
ATG3-204ENST00000467275 PRKCSHP14314 528 aaPredicted RBP10.98□□□□□ -0.65
ATG3-204ENST00000467275 GMPRP36959 345 aa10.98□□□□□ -0.65
ATG3-204ENST00000467275 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
ATG3-204ENST00000467275 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
ATG3-204ENST00000467275 NR1H3Q13133 447 aa10.97□□□□□ -0.65
ATG3-204ENST00000467275 ZNF330Q9Y3S2 320 aaPredicted RBP10.97□□□□□ -0.65
ATG3-204ENST00000467275 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
ATG3-204ENST00000467275 ZNF592Q92610 1267 aa10.96□□□□□ -0.65
ATG3-204ENST00000467275 ZNF395Q9H8N7 513 aaPredicted RBP10.96□□□□□ -0.65
ATG3-204ENST00000467275 LILRA1O75019 489 aa10.95□□□□□ -0.66
ATG3-204ENST00000467275 PPFIA3O75145 1194 aa10.95□□□□□ -0.66
ATG3-204ENST00000467275 ADH1AP07327 375 aa10.95□□□□□ -0.66
ATG3-204ENST00000467275 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
ATG3-204ENST00000467275 INSM2Q96T92 566 aaPredicted RBP10.95□□□□□ -0.66
ATG3-204ENST00000467275 POLMQ9NP87 494 aaPredicted RBP10.95□□□□□ -0.66
ATG3-204ENST00000467275 CYLDQ9NQC7 956 aa10.95□□□□□ -0.66
ATG3-204ENST00000467275 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
ATG3-204ENST00000467275 CTSOP43234 321 aaPredicted RBP10.94□□□□□ -0.66
ATG3-204ENST00000467275 RNF20Q5VTR2 975 aa10.93□□□□□ -0.66
ATG3-204ENST00000467275 PTSQ03393 145 aa10.92□□□□□ -0.66
ATG3-204ENST00000467275 CCDC125Q86Z20 511 aa10.92□□□□□ -0.66
ATG3-204ENST00000467275 PRM3Q9NNZ6 103 aa10.92□□□□□ -0.66
ATG3-204ENST00000467275 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
ATG3-204ENST00000467275 GPR37L1O60883 481 aa10.91□□□□□ -0.66
ATG3-204ENST00000467275 PTGIRP43119 386 aa10.91□□□□□ -0.66
ATG3-204ENST00000467275 VSIG8P0DPA2 414 aa10.9□□□□□ -0.66
ATG3-204ENST00000467275 KDF1Q8NAX2 398 aaPredicted RBP10.88□□□□□ -0.67
ATG3-204ENST00000467275 RNF217Q8TC41 542 aa10.88□□□□□ -0.67
ATG3-204ENST00000467275 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
ATG3-204ENST00000467275 ATP5J2-PTCD1G3V325 749 aa10.87□□□□□ -0.67
ATG3-204ENST00000467275 CCDC155Q8N6L0 562 aa10.87□□□□□ -0.67
ATG3-204ENST00000467275 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
ATG3-204ENST00000467275 ZSCAN1Q8NBB4 408 aa10.86□□□□□ -0.67
ATG3-204ENST00000467275 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
ATG3-204ENST00000467275 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
ATG3-204ENST00000467275 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
ATG3-204ENST00000467275 FAM181BA6NEQ2 426 aa10.84□□□□□ -0.67
ATG3-204ENST00000467275 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
ATG3-204ENST00000467275 SLC35F4A4IF30 521 aa10.83□□□□□ -0.68
ATG3-204ENST00000467275 MEN1O00255 615 aa10.83□□□□□ -0.68
ATG3-204ENST00000467275 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms