RNA–Protein interactions for RNA: ENST00000467215.1

FAM53A-204, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 811 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-204ENST00000467215 TOM1L2Q6ZVM7 507 aa27.79■■■□□ 2.04
FAM53A-204ENST00000467215 WDR17Q8IZU2 1322 aa27.78■■■□□ 2.04
FAM53A-204ENST00000467215 DDB1Q16531 1140 aa27.78■■■□□ 2.04
FAM53A-204ENST00000467215 SPON1Q9HCB6 807 aa27.78■■■□□ 2.04
FAM53A-204ENST00000467215 NINLQ9Y2I6 1382 aa27.77■■■□□ 2.04
FAM53A-204ENST00000467215 C11orf95C9JLR9 678 aaPredicted RBP27.77■■■□□ 2.04
FAM53A-204ENST00000467215 PTF1AQ7RTS3 328 aa27.77■■■□□ 2.04
FAM53A-204ENST00000467215 PPP1R1BQ9UD71 204 aaPredicted RBP27.77■■■□□ 2.04
FAM53A-204ENST00000467215 USP54Q70EL1 1684 aa27.77■■■□□ 2.04
FAM53A-204ENST00000467215 LTN1O94822 1766 aa27.76■■■□□ 2.03
FAM53A-204ENST00000467215 NHSQ6T4R5 1651 aa27.76■■■□□ 2.03
FAM53A-204ENST00000467215 KCNQ2O43526 872 aa27.76■■■□□ 2.03
FAM53A-204ENST00000467215 AXIN2Q9Y2T1 843 aa27.75■■■□□ 2.03
FAM53A-204ENST00000467215 ABCC6O95255 1503 aa27.74■■■□□ 2.03
FAM53A-204ENST00000467215 YY1P25490 414 aa27.74■■■□□ 2.03
FAM53A-204ENST00000467215 EVC2Q86UK5 1308 aa27.73■■■□□ 2.03
FAM53A-204ENST00000467215 PLSCR1O15162 318 aa27.72■■■□□ 2.03
FAM53A-204ENST00000467215 SOX12O15370 315 aa27.72■■■□□ 2.03
FAM53A-204ENST00000467215 BCL9O00512 1426 aa27.72■■■□□ 2.03
FAM53A-204ENST00000467215 TNS2Q63HR2 1409 aa27.71■■■□□ 2.03
FAM53A-204ENST00000467215 MARCH10Q8NA82 808 aaPredicted RBP27.71■■■□□ 2.03
FAM53A-204ENST00000467215 TTC21BQ7Z4L5 1316 aa27.7■■■□□ 2.03
FAM53A-204ENST00000467215 L3MBTL2Q969R5 705 aa27.7■■■□□ 2.02
FAM53A-204ENST00000467215 ARHGEF25Q86VW2 580 aa27.69■■■□□ 2.02
FAM53A-204ENST00000467215 BCL11BQ9C0K0 894 aaPredicted RBP27.69■■■□□ 2.02
FAM53A-204ENST00000467215 PDGFDQ9GZP0 370 aaPredicted RBP27.68■■■□□ 2.02
FAM53A-204ENST00000467215 ROCK2O75116 1388 aaKnown RBP27.68■■■□□ 2.02
FAM53A-204ENST00000467215 BTAF1O14981 1849 aa27.67■■■□□ 2.02
FAM53A-204ENST00000467215 PAPPAQ13219 1627 aa27.67■■■□□ 2.02
FAM53A-204ENST00000467215 TTC21AQ8NDW8 1320 aa27.66■■■□□ 2.02
FAM53A-204ENST00000467215 CSB-PGBD3P0DP91 1061 aa27.65■■■□□ 2.02
FAM53A-204ENST00000467215 CDCA7Q9BWT1 371 aaPredicted RBP27.65■■■□□ 2.02
FAM53A-204ENST00000467215 PROM2Q8N271 834 aa27.64■■■□□ 2.02
FAM53A-204ENST00000467215 KCNH5Q8NCM2 988 aa27.64■■■□□ 2.02
FAM53A-204ENST00000467215 CARD10Q9BWT7 1032 aa27.64■■■□□ 2.02
FAM53A-204ENST00000467215 KTN1Q86UP2 1357 aaKnown RBP27.63■■■□□ 2.01
FAM53A-204ENST00000467215 CCDC7Q96M83 1385 aa27.62■■■□□ 2.01
FAM53A-204ENST00000467215 ZBTB7AO95365 584 aa27.61■■■□□ 2.01
FAM53A-204ENST00000467215 ZNF692Q9BU19 519 aaPredicted RBP27.6■■■□□ 2.01
FAM53A-204ENST00000467215 CD163L1Q9NR16 1453 aa27.59■■■□□ 2.01
FAM53A-204ENST00000467215 TXNRD1Q16881 649 aa27.59■■■□□ 2.01
FAM53A-204ENST00000467215 SIN3AQ96ST3 1273 aa27.58■■■□□ 2.01
FAM53A-204ENST00000467215 KAT6BQ8WYB5 2073 aa27.57■■■□□ 2
FAM53A-204ENST00000467215 DCAF8L1A6NGE4 600 aa27.56■■■□□ 2
FAM53A-204ENST00000467215 FAM208AQ9UK61 1670 aaKnown RBP27.56■■■□□ 2
FAM53A-204ENST00000467215 CHD4Q14839 1912 aa27.55■■■□□ 2
FAM53A-204ENST00000467215 PTGER2P43116 358 aa27.55■■■□□ 2
FAM53A-204ENST00000467215 STK32BQ9NY57 414 aa27.55■■■□□ 2
FAM53A-204ENST00000467215 ERBB3P21860 1342 aa27.55■■■□□ 2
FAM53A-204ENST00000467215 USP31Q70CQ4 1352 aa27.54■■■□□ 2
FAM53A-204ENST00000467215 SBNO2Q9Y2G9 1366 aa27.54■■■□□ 2
FAM53A-204ENST00000467215 TUBGCP6Q96RT7 1819 aa27.53■■■□□ 2
FAM53A-204ENST00000467215 EXOC5O00471 708 aa27.53■■■□□ 2
FAM53A-204ENST00000467215 ATF5Q9Y2D1 282 aaPredicted RBP27.53■■■□□ 2
FAM53A-204ENST00000467215 SLC15A2Q16348 729 aa27.52■■■□□ 2
FAM53A-204ENST00000467215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.52■■■□□ 2
FAM53A-204ENST00000467215 QSER1Q2KHR3 1735 aa27.52■■■□□ 2
FAM53A-204ENST00000467215 DOT1LQ8TEK3 1739 aa27.5■■□□□ 1.99
FAM53A-204ENST00000467215 NME9Q86XW9 330 aa27.5■■□□□ 1.99
FAM53A-204ENST00000467215 ACSBG1Q96GR2 724 aa27.5■■□□□ 1.99
FAM53A-204ENST00000467215 NEUROD1Q13562 356 aa27.49■■□□□ 1.99
FAM53A-204ENST00000467215 SHANK3Q9BYB0 1731 aa27.48■■□□□ 1.99
FAM53A-204ENST00000467215 NLRP2Q9NX02 1062 aa27.47■■□□□ 1.99
FAM53A-204ENST00000467215 RGPD2P0DJD1 1756 aa27.47■■□□□ 1.99
FAM53A-204ENST00000467215 FHDC1Q9C0D6 1143 aaPredicted RBP27.46■■□□□ 1.99
FAM53A-204ENST00000467215 EDC4Q6P2E9 1401 aaKnown RBP27.46■■□□□ 1.99
FAM53A-204ENST00000467215 SGIP1Q9BQI5 828 aa27.45■■□□□ 1.98
FAM53A-204ENST00000467215 MTFR1LQ9H019 292 aa27.45■■□□□ 1.98
FAM53A-204ENST00000467215 UTRNP46939 3433 aa27.44■■□□□ 1.98
FAM53A-204ENST00000467215 COL24A1Q17RW2 1714 aa27.44■■□□□ 1.98
FAM53A-204ENST00000467215 IL2RBP14784 551 aa27.43■■□□□ 1.98
FAM53A-204ENST00000467215 A0A1W2PP64 1363 aa27.43■■□□□ 1.98
FAM53A-204ENST00000467215 ANKRD24Q8TF21 1146 aa27.42■■□□□ 1.98
FAM53A-204ENST00000467215 SYT17Q9BSW7 474 aa27.42■■□□□ 1.98
FAM53A-204ENST00000467215 LY75O60449 1722 aa27.41■■□□□ 1.98
FAM53A-204ENST00000467215 ZNF827Q17R98 1081 aa27.4■■□□□ 1.98
FAM53A-204ENST00000467215 TMC1Q8TDI8 760 aa27.39■■□□□ 1.98
FAM53A-204ENST00000467215 HDGFL2Q7Z4V5 671 aaPredicted RBP27.37■■□□□ 1.97
FAM53A-204ENST00000467215 CARD11Q9BXL7 1154 aa27.37■■□□□ 1.97
FAM53A-204ENST00000467215 ZNF784Q8NCA9 323 aaPredicted RBP27.36■■□□□ 1.97
FAM53A-204ENST00000467215 SLC12A5Q9H2X9 1139 aa27.36■■□□□ 1.97
FAM53A-204ENST00000467215 LRRC4BQ9NT99 713 aa27.35■■□□□ 1.97
FAM53A-204ENST00000467215 MAP3K5Q99683 1374 aa27.35■■□□□ 1.97
FAM53A-204ENST00000467215 ARXQ96QS3 562 aa27.33■■□□□ 1.97
FAM53A-204ENST00000467215 MEGF6O75095 1541 aa27.3■■□□□ 1.96
FAM53A-204ENST00000467215 TERF2IPQ9NYB0 399 aa27.29■■□□□ 1.96
FAM53A-204ENST00000467215 LTV1Q96GA3 475 aaPredicted RBP27.28■■□□□ 1.96
FAM53A-204ENST00000467215 NSD2O96028 1365 aa27.27■■□□□ 1.96
FAM53A-204ENST00000467215 DDX54Q8TDD1 881 aaKnown RBP27.27■■□□□ 1.96
FAM53A-204ENST00000467215 AKT1S1Q96B36 256 aa27.27■■□□□ 1.96
FAM53A-204ENST00000467215 KIF20BQ96Q89 1820 aa27.26■■□□□ 1.95
FAM53A-204ENST00000467215 IP6K1Q92551 441 aa27.26■■□□□ 1.95
FAM53A-204ENST00000467215 PNPLA7Q6ZV29 1317 aa27.25■■□□□ 1.95
FAM53A-204ENST00000467215 C5P01031 1676 aa27.25■■□□□ 1.95
FAM53A-204ENST00000467215 ANKRD36BQ8N2N9 1353 aa27.24■■□□□ 1.95
FAM53A-204ENST00000467215 TONSLQ96HA7 1378 aa27.24■■□□□ 1.95
FAM53A-204ENST00000467215 MAP3K19Q56UN5 1328 aa27.24■■□□□ 1.95
FAM53A-204ENST00000467215 KCNQ4P56696 695 aa27.23■■□□□ 1.95
FAM53A-204ENST00000467215 KLHL34Q8N239 644 aa27.23■■□□□ 1.95
FAM53A-204ENST00000467215 SLC27A3Q5K4L6 730 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms