RNA–Protein interactions for RNA: ENST00000467129.2

SDCBP2-205, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-205ENST00000467129 AMPHP49418 695 aa24.08■■□□□ 1.45
SDCBP2-205ENST00000467129 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
SDCBP2-205ENST00000467129 ZBTB7CA1YPR0 619 aa24.07■■□□□ 1.44
SDCBP2-205ENST00000467129 CHRNA2Q15822 529 aa24.07■■□□□ 1.44
SDCBP2-205ENST00000467129 ZNF772Q68DY9 489 aaPredicted RBP24.07■■□□□ 1.44
SDCBP2-205ENST00000467129 IP6K1Q92551 441 aa24.07■■□□□ 1.44
SDCBP2-205ENST00000467129 BCL9LQ86UU0 1499 aa24.07■■□□□ 1.44
SDCBP2-205ENST00000467129 TNNT2P45379 298 aaPredicted RBP24.06■■□□□ 1.44
SDCBP2-205ENST00000467129 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
SDCBP2-205ENST00000467129 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
SDCBP2-205ENST00000467129 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
SDCBP2-205ENST00000467129 INSRP06213 1382 aa24.05■■□□□ 1.44
SDCBP2-205ENST00000467129 HOXC9P31274 260 aa24.05■■□□□ 1.44
SDCBP2-205ENST00000467129 UNC5CLQ8IV45 518 aa24.05■■□□□ 1.44
SDCBP2-205ENST00000467129 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
SDCBP2-205ENST00000467129 USP21Q9UK80 565 aa24.05■■□□□ 1.44
SDCBP2-205ENST00000467129 EMILIN1Q9Y6C2 1016 aa24.03■■□□□ 1.44
SDCBP2-205ENST00000467129 RGPD5Q99666 1765 aa24.02■■□□□ 1.44
SDCBP2-205ENST00000467129 ERBB3P21860 1342 aa24.02■■□□□ 1.44
SDCBP2-205ENST00000467129 ATRNO75882 1429 aa24.01■■□□□ 1.43
SDCBP2-205ENST00000467129 TRPC5Q9UL62 973 aaPredicted RBP24.01■■□□□ 1.43
SDCBP2-205ENST00000467129 FBLN1P23142 703 aa24■■□□□ 1.43
SDCBP2-205ENST00000467129 CNGB1Q14028 1251 aaPredicted RBP24■■□□□ 1.43
SDCBP2-205ENST00000467129 PRKRIP1Q9H875 184 aaPredicted RBP24■■□□□ 1.43
SDCBP2-205ENST00000467129 WDR17Q8IZU2 1322 aa24■■□□□ 1.43
SDCBP2-205ENST00000467129 MYBBP1AQ9BQG0 1328 aaKnown RBP24■■□□□ 1.43
SDCBP2-205ENST00000467129 CRB1P82279 1406 aa24■■□□□ 1.43
SDCBP2-205ENST00000467129 PPP2R1AP30153 589 aa23.99■■□□□ 1.43
SDCBP2-205ENST00000467129 EVA1CP58658 441 aa23.99■■□□□ 1.43
SDCBP2-205ENST00000467129 VPS72Q15906 364 aa23.99■■□□□ 1.43
SDCBP2-205ENST00000467129 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
SDCBP2-205ENST00000467129 ANP32CO43423 234 aa23.98■■□□□ 1.43
SDCBP2-205ENST00000467129 AXIN2Q9Y2T1 843 aa23.98■■□□□ 1.43
SDCBP2-205ENST00000467129 MTHFSP49914 203 aa23.97■■□□□ 1.43
SDCBP2-205ENST00000467129 ANKRD24Q8TF21 1146 aa23.97■■□□□ 1.43
SDCBP2-205ENST00000467129 CFAP53Q96M91 514 aa23.97■■□□□ 1.43
SDCBP2-205ENST00000467129 CSB-PGBD3P0DP91 1061 aa23.95■■□□□ 1.42
SDCBP2-205ENST00000467129 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
SDCBP2-205ENST00000467129 HSP90AB2PQ58FF8 381 aa23.94■■□□□ 1.42
SDCBP2-205ENST00000467129 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
SDCBP2-205ENST00000467129 SPATA31A5Q5VU36 1347 aa23.92■■□□□ 1.42
SDCBP2-205ENST00000467129 SPATA31A7Q8IWB4 1347 aa23.92■■□□□ 1.42
SDCBP2-205ENST00000467129 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
SDCBP2-205ENST00000467129 LARP1Q6PKG0 1096 aaKnown RBP23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 TOM1L2Q6ZVM7 507 aa23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 CARD10Q9BWT7 1032 aa23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 QTRT2Q9H974 415 aaKnown RBP23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 NCAPD2Q15021 1401 aa23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 WNK3Q9BYP7 1800 aa23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 GLI3P10071 1580 aa23.91■■□□□ 1.42
SDCBP2-205ENST00000467129 SPATA31A1Q5TZJ5 1347 aa23.9■■□□□ 1.42
SDCBP2-205ENST00000467129 RGS17Q9UGC6 210 aaPredicted RBP23.9■■□□□ 1.42
SDCBP2-205ENST00000467129 GJD4Q96KN9 370 aaPredicted RBP23.89■■□□□ 1.41
SDCBP2-205ENST00000467129 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
SDCBP2-205ENST00000467129 RGPD1P0DJD0 1748 aa23.89■■□□□ 1.41
SDCBP2-205ENST00000467129 PLEKHG2Q9H7P9 1386 aa23.89■■□□□ 1.41
SDCBP2-205ENST00000467129 RBM6P78332 1123 aaKnown RBP23.88■■□□□ 1.41
SDCBP2-205ENST00000467129 EIF4A2Q14240 407 aaKnown RBP23.88■■□□□ 1.41
SDCBP2-205ENST00000467129 LTV1Q96GA3 475 aaPredicted RBP23.88■■□□□ 1.41
SDCBP2-205ENST00000467129 NLRP2Q9NX02 1062 aa23.88■■□□□ 1.41
SDCBP2-205ENST00000467129 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
SDCBP2-205ENST00000467129 TCP11L2Q8N4U5 519 aa23.87■■□□□ 1.41
SDCBP2-205ENST00000467129 DIEXFQ68CQ4 756 aaKnown RBP23.86■■□□□ 1.41
SDCBP2-205ENST00000467129 BARGINQ6ZT62 677 aa23.86■■□□□ 1.41
SDCBP2-205ENST00000467129 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
SDCBP2-205ENST00000467129 IGSF1Q8N6C5 1336 aa23.85■■□□□ 1.41
SDCBP2-205ENST00000467129 IL13P35225 146 aa23.85■■□□□ 1.41
SDCBP2-205ENST00000467129 THSD7AQ9UPZ6 1657 aa23.85■■□□□ 1.41
SDCBP2-205ENST00000467129 RGPD2P0DJD1 1756 aa23.84■■□□□ 1.41
SDCBP2-205ENST00000467129 RXRBP28702 533 aa23.84■■□□□ 1.41
SDCBP2-205ENST00000467129 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
SDCBP2-205ENST00000467129 PARP4Q9UKK3 1724 aaKnown RBP23.84■■□□□ 1.41
SDCBP2-205ENST00000467129 DISP2A7MBM2 1401 aa23.83■■□□□ 1.4
SDCBP2-205ENST00000467129 POTEAQ6S8J7 498 aa23.82■■□□□ 1.4
SDCBP2-205ENST00000467129 NBPF6Q5VWK0 638 aa23.81■■□□□ 1.4
SDCBP2-205ENST00000467129 NBPF4Q96M43 638 aa23.81■■□□□ 1.4
SDCBP2-205ENST00000467129 KDRP35968 1356 aa23.8■■□□□ 1.4
SDCBP2-205ENST00000467129 EYA1Q99502 592 aa23.8■■□□□ 1.4
SDCBP2-205ENST00000467129 ONECUT3O60422 494 aaPredicted RBP23.79■■□□□ 1.4
SDCBP2-205ENST00000467129 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
SDCBP2-205ENST00000467129 LRRC37A3O60309 1634 aa23.77■■□□□ 1.4
SDCBP2-205ENST00000467129 IL2RBP14784 551 aa23.77■■□□□ 1.4
SDCBP2-205ENST00000467129 RAPGEF4Q8WZA2 1011 aa23.77■■□□□ 1.4
SDCBP2-205ENST00000467129 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
SDCBP2-205ENST00000467129 TNS2Q63HR2 1409 aa23.76■■□□□ 1.39
SDCBP2-205ENST00000467129 FAM98CQ17RN3 349 aaKnown RBP23.76■■□□□ 1.39
SDCBP2-205ENST00000467129 RGS12O14924 1447 aa23.76■■□□□ 1.39
SDCBP2-205ENST00000467129 MEGF6O75095 1541 aa23.74■■□□□ 1.39
SDCBP2-205ENST00000467129 PKD1L3Q7Z443 1732 aa23.74■■□□□ 1.39
SDCBP2-205ENST00000467129 U2SURPO15042 1029 aaKnown RBP23.74■■□□□ 1.39
SDCBP2-205ENST00000467129 TATP17735 454 aaPredicted RBP23.73■■□□□ 1.39
SDCBP2-205ENST00000467129 USHBP1Q8N6Y0 703 aa23.73■■□□□ 1.39
SDCBP2-205ENST00000467129 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
SDCBP2-205ENST00000467129 A0A0G2JS52 829 aa23.71■■□□□ 1.39
SDCBP2-205ENST00000467129 MYT1Q01538 1121 aa23.71■■□□□ 1.39
SDCBP2-205ENST00000467129 CCER2I3L3R5 266 aa23.7■■□□□ 1.38
SDCBP2-205ENST00000467129 U2AF1L5P0DN76 240 aaPredicted RBP23.7■■□□□ 1.38
SDCBP2-205ENST00000467129 U2AF1Q01081 240 aaKnown RBP eCLIP23.7■■□□□ 1.38
SDCBP2-205ENST00000467129 WDR43Q15061 677 aaKnown RBP eCLIP23.7■■□□□ 1.38
SDCBP2-205ENST00000467129 SEPT12Q8IYM1 358 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms