RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RPIAP49247 311 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 MAP7D1Q3KQU3 841 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 KANK4Q5T7N3 995 aaPredicted RBP7.21□□□□□ -1.26
VPS13A-209ENST00000467124 TMCO4Q5TGY1 634 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L2Q6R6M4 530 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L1Q7RTZ2 530 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 DZIP3Q86Y13 1208 aaKnown RBP7.21□□□□□ -1.26
VPS13A-209ENST00000467124 STK32AQ8WU08 396 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 CEP126Q9P2H0 1117 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 TMEM88BA6NKF7 163 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 TRIM32Q13049 653 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 AGERQ15109 404 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 TSGA10IPQ3SY00 556 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 LINC01559Q495D7 138 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 ERFEQ4G0M1 354 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 RNF20Q5VTR2 975 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 RNF135Q8IUD6 432 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 BAP1Q92560 729 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 CHIC2Q9UKJ5 165 aa7.2□□□□□ -1.26
VPS13A-209ENST00000467124 MAGEB6P1A0A0J9YX57 407 aa7.19□□□□□ -1.26
VPS13A-209ENST00000467124 ZMIZ1Q9ULJ6 1067 aa7.19□□□□□ -1.26
VPS13A-209ENST00000467124 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 SH3BP2P78314 561 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 NCOA4Q13772 614 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 ELOAQ14241 798 aaKnown RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 TMEM164Q5U3C3 297 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 FOXD4L5Q5VV16 416 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 PHTF2Q8N3S3 785 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 FOXD4L4Q8WXT5 416 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 NOVA2Q9UNW9 492 aaKnown RBP7.18□□□□□ -1.26
VPS13A-209ENST00000467124 MTMR7Q9Y216 660 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 MAP4K5Q9Y4K4 846 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 IVNS1ABPQ9Y6Y0 642 aa7.18□□□□□ -1.26
VPS13A-209ENST00000467124 PATL2C9JE40 543 aaKnown RBP7.17□□□□□ -1.26
VPS13A-209ENST00000467124 BRD1O95696 1058 aa7.17□□□□□ -1.26
VPS13A-209ENST00000467124 VARSP26640 1264 aaKnown RBP7.17□□□□□ -1.26
VPS13A-209ENST00000467124 CRTC2Q53ET0 693 aaPredicted RBP7.17□□□□□ -1.26
VPS13A-209ENST00000467124 PLPP7Q8NBV4 271 aa7.17□□□□□ -1.26
VPS13A-209ENST00000467124 FAM196BA6NMK8 535 aa7.16□□□□□ -1.26
VPS13A-209ENST00000467124 ATP5J2-PTCD1G3V325 749 aa7.16□□□□□ -1.26
VPS13A-209ENST00000467124 PPP1R18Q6NYC8 613 aa7.16□□□□□ -1.26
VPS13A-209ENST00000467124 FOXJ1Q92949 421 aa7.16□□□□□ -1.26
VPS13A-209ENST00000467124 ESPNB1AK53 854 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L10C9JJH3 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L12C9JPN9 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L21D6R901 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 RASA1P20936 1047 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 KCNA1Q09470 495 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 EML3Q32P44 896 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 MPNDQ8N594 471 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 SIRT1Q96EB6 747 aa7.15□□□□□ -1.26
VPS13A-209ENST00000467124 ZNF594Q96JF6 807 aaPredicted RBP7.15□□□□□ -1.26
VPS13A-209ENST00000467124 PPEF1O14829 653 aaPredicted RBP7.14□□□□□ -1.27
VPS13A-209ENST00000467124 LGR5O75473 907 aa7.14□□□□□ -1.27
VPS13A-209ENST00000467124 CD2BP2O95400 341 aaKnown RBP7.14□□□□□ -1.27
VPS13A-209ENST00000467124 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
VPS13A-209ENST00000467124 B4GALNT3Q6L9W6 998 aa7.14□□□□□ -1.27
VPS13A-209ENST00000467124 LARP1Q6PKG0 1096 aaKnown RBP7.14□□□□□ -1.27
VPS13A-209ENST00000467124 DOLKQ9UPQ8 538 aa7.14□□□□□ -1.27
VPS13A-209ENST00000467124 GIGYF1O75420 1035 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-209ENST00000467124 SCNN1AP37088 669 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 ATP1A2P50993 1020 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 RAB15P59190 212 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 PLA2G2CQ5R387 149 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 TRAF7Q6Q0C0 670 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 ZNF428Q96B54 188 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 CCDC85AQ96PX6 553 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-209ENST00000467124 SLAIN2Q9P270 581 aa7.13□□□□□ -1.27
VPS13A-209ENST00000467124 RGS22Q8NE09 1264 aa7.12□□□□□ -1.27
VPS13A-209ENST00000467124 NOD1Q9Y239 953 aa7.12□□□□□ -1.27
VPS13A-209ENST00000467124 CLDN10P78369 228 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 SKOR1P84550 965 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 DPYDQ12882 1025 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 PTK7Q13308 1070 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 OGFOD1Q8N543 542 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 EHBP1Q8NDI1 1231 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 CDK15Q96Q40 435 aa7.11□□□□□ -1.27
VPS13A-209ENST00000467124 CDCA7Q9BWT1 371 aaPredicted RBP7.11□□□□□ -1.27
VPS13A-209ENST00000467124 DHX9Q08211 1270 aaKnown RBP7.1□□□□□ -1.27
VPS13A-209ENST00000467124 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
VPS13A-209ENST00000467124 FAM200AQ8TCP9 573 aa7.1□□□□□ -1.27
VPS13A-209ENST00000467124 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
VPS13A-209ENST00000467124 KIAA1024Q9UPX6 916 aa7.1□□□□□ -1.27
VPS13A-209ENST00000467124 WNT7AO00755 349 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms