RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 C10orf71Q711Q0 1435 aa8.35□□□□□ -1.07
CXXC4-202ENST00000466963 XPCQ01831 940 aaPredicted RBP8.35□□□□□ -1.07
CXXC4-202ENST00000466963 SGIP1Q9BQI5 828 aa8.35□□□□□ -1.07
CXXC4-202ENST00000466963 CPSF1Q10570 1443 aaKnown RBP8.35□□□□□ -1.07
CXXC4-202ENST00000466963 PIK3C2AO00443 1686 aa8.35□□□□□ -1.07
CXXC4-202ENST00000466963 PTGER2P43116 358 aa8.35□□□□□ -1.07
CXXC4-202ENST00000466963 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
CXXC4-202ENST00000466963 LMOD2Q6P5Q4 547 aa8.34□□□□□ -1.07
CXXC4-202ENST00000466963 PRR36Q9H6K5 1346 aa8.34□□□□□ -1.07
CXXC4-202ENST00000466963 CGNL1Q0VF96 1302 aa8.34□□□□□ -1.07
CXXC4-202ENST00000466963 SBNO2Q9Y2G9 1366 aa8.34□□□□□ -1.07
CXXC4-202ENST00000466963 USP6P35125 1406 aa8.34□□□□□ -1.07
CXXC4-202ENST00000466963 SENP3-EIF4A1A0A087X0R7 540 aa8.34□□□□□ -1.08
CXXC4-202ENST00000466963 ARXQ96QS3 562 aa8.34□□□□□ -1.08
CXXC4-202ENST00000466963 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
CXXC4-202ENST00000466963 LOC105371045A0A1W2PR82 267 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 SYT17Q9BSW7 474 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 GCP02774 474 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 EXOC5O00471 708 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 CD2APQ9Y5K6 639 aa8.32□□□□□ -1.08
CXXC4-202ENST00000466963 ACEP12821 1306 aa8.31□□□□□ -1.08
CXXC4-202ENST00000466963 SHANK3Q9BYB0 1731 aa8.31□□□□□ -1.08
CXXC4-202ENST00000466963 LY75O60449 1722 aa8.31□□□□□ -1.08
CXXC4-202ENST00000466963 NSD2O96028 1365 aa8.31□□□□□ -1.08
CXXC4-202ENST00000466963 TXNRD1Q16881 649 aa8.31□□□□□ -1.08
CXXC4-202ENST00000466963 ABTB2Q8N961 1025 aa8.31□□□□□ -1.08
CXXC4-202ENST00000466963 PPIP5K1Q6PFW1 1433 aa8.3□□□□□ -1.08
CXXC4-202ENST00000466963 KIF24Q5T7B8 1368 aa8.3□□□□□ -1.08
CXXC4-202ENST00000466963 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
CXXC4-202ENST00000466963 ADCY9O60503 1353 aa8.3□□□□□ -1.08
CXXC4-202ENST00000466963 MON2Q7Z3U7 1717 aa8.3□□□□□ -1.08
CXXC4-202ENST00000466963 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
CXXC4-202ENST00000466963 APLP1P51693 650 aa8.29□□□□□ -1.08
CXXC4-202ENST00000466963 CDK19Q9BWU1 502 aa8.29□□□□□ -1.08
CXXC4-202ENST00000466963 NFAT5O94916 1531 aa8.29□□□□□ -1.08
CXXC4-202ENST00000466963 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
CXXC4-202ENST00000466963 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
CXXC4-202ENST00000466963 ZNF831Q5JPB2 1677 aa8.29□□□□□ -1.08
CXXC4-202ENST00000466963 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
CXXC4-202ENST00000466963 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
CXXC4-202ENST00000466963 HSPA6P17066 643 aa8.28□□□□□ -1.08
CXXC4-202ENST00000466963 RGL3Q3MIN7 710 aa8.28□□□□□ -1.08
CXXC4-202ENST00000466963 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
CXXC4-202ENST00000466963 BTAF1O14981 1849 aa8.27□□□□□ -1.08
CXXC4-202ENST00000466963 RTL1A6NKG5 1358 aa8.27□□□□□ -1.08
CXXC4-202ENST00000466963 FHDC1Q9C0D6 1143 aaPredicted RBP8.27□□□□□ -1.09
CXXC4-202ENST00000466963 CENPJQ9HC77 1338 aaPredicted RBP8.27□□□□□ -1.09
CXXC4-202ENST00000466963 TOM1L2Q6ZVM7 507 aa8.27□□□□□ -1.09
CXXC4-202ENST00000466963 MINK1Q8N4C8 1332 aaPredicted RBP8.26□□□□□ -1.09
CXXC4-202ENST00000466963 AKT1S1Q96B36 256 aa8.26□□□□□ -1.09
CXXC4-202ENST00000466963 NUTM2FA1L443 756 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 GPR162Q16538 588 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 ANKRD36BQ8N2N9 1353 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 ITGAEP38570 1179 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 TRAK1Q9UPV9 953 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 IL2RBP14784 551 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 PCDH10Q9P2E7 1040 aa8.25□□□□□ -1.09
CXXC4-202ENST00000466963 FSTL1Q12841 308 aa8.24□□□□□ -1.09
CXXC4-202ENST00000466963 MARCH10Q8NA82 808 aaPredicted RBP8.24□□□□□ -1.09
CXXC4-202ENST00000466963 ZC3H6P61129 1189 aaKnown RBP8.24□□□□□ -1.09
CXXC4-202ENST00000466963 SMARCC1Q92922 1105 aaPredicted RBP8.24□□□□□ -1.09
CXXC4-202ENST00000466963 ANO8Q9HCE9 1232 aaPredicted RBP8.23□□□□□ -1.09
CXXC4-202ENST00000466963 EDC4Q6P2E9 1401 aaKnown RBP8.23□□□□□ -1.09
CXXC4-202ENST00000466963 PROM2Q8N271 834 aa8.23□□□□□ -1.09
CXXC4-202ENST00000466963 SMG6Q86US8 1419 aaKnown RBP8.22□□□□□ -1.09
CXXC4-202ENST00000466963 KIF13BQ9NQT8 1826 aa8.22□□□□□ -1.09
CXXC4-202ENST00000466963 NLRP6P59044 892 aa8.22□□□□□ -1.09
CXXC4-202ENST00000466963 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
CXXC4-202ENST00000466963 ATP10DQ9P241 1426 aa8.22□□□□□ -1.09
CXXC4-202ENST00000466963 TTC21BQ7Z4L5 1316 aa8.22□□□□□ -1.09
CXXC4-202ENST00000466963 RBM46Q8TBY0 533 aaKnown RBP8.22□□□□□ -1.09
CXXC4-202ENST00000466963 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
CXXC4-202ENST00000466963 MAPK8IP2Q13387 824 aaPredicted RBP8.2□□□□□ -1.1
CXXC4-202ENST00000466963 TNRC6CQ9HCJ0 1690 aaKnown RBP8.2□□□□□ -1.1
CXXC4-202ENST00000466963 ERBB3P21860 1342 aa8.2□□□□□ -1.1
CXXC4-202ENST00000466963 JMYQ8N9B5 988 aa8.2□□□□□ -1.1
CXXC4-202ENST00000466963 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
CXXC4-202ENST00000466963 PXDNLA1KZ92 1463 aa8.2□□□□□ -1.1
CXXC4-202ENST00000466963 C5P01031 1676 aa8.2□□□□□ -1.1
CXXC4-202ENST00000466963 DCAF11Q8TEB1 546 aa8.2□□□□□ -1.1
CXXC4-202ENST00000466963 ZBTB7AO95365 584 aa8.19□□□□□ -1.1
CXXC4-202ENST00000466963 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
CXXC4-202ENST00000466963 SRPK2P78362 688 aaKnown RBP8.19□□□□□ -1.1
CXXC4-202ENST00000466963 TUBGCP6Q96RT7 1819 aa8.19□□□□□ -1.1
CXXC4-202ENST00000466963 LTN1O94822 1766 aa8.19□□□□□ -1.1
CXXC4-202ENST00000466963 TGFB2P61812 414 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 TOMM70O94826 608 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 HDGFL2Q7Z4V5 671 aaPredicted RBP8.18□□□□□ -1.1
CXXC4-202ENST00000466963 WDR90Q96KV7 1748 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 PNPLA7Q6ZV29 1317 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
CXXC4-202ENST00000466963 ATF5Q9Y2D1 282 aaPredicted RBP8.18□□□□□ -1.1
CXXC4-202ENST00000466963 SSFA2P28290 1259 aa8.17□□□□□ -1.1
CXXC4-202ENST00000466963 RAB3GAP2Q9H2M9 1393 aa8.17□□□□□ -1.1
CXXC4-202ENST00000466963 PPP4R3CPQ6ZMV5 832 aa8.17□□□□□ -1.1
CXXC4-202ENST00000466963 IP6K1Q92551 441 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms