RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 USP47Q96K76 1375 aa35.27■■■■□ 3.24
SDF2L1-202ENST00000466935 BAG6P46379 1132 aa35.27■■■■□ 3.24
SDF2L1-202ENST00000466935 FAM196AQ6ZSG2 479 aa35.27■■■■□ 3.24
SDF2L1-202ENST00000466935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.26■■■■□ 3.24
SDF2L1-202ENST00000466935 TNS1Q9HBL0 1735 aaKnown RBP35.26■■■■□ 3.23
SDF2L1-202ENST00000466935 RGPD5Q99666 1765 aa35.25■■■■□ 3.23
SDF2L1-202ENST00000466935 WDR17Q8IZU2 1322 aa35.25■■■■□ 3.23
SDF2L1-202ENST00000466935 DISP2A7MBM2 1401 aa35.24■■■■□ 3.23
SDF2L1-202ENST00000466935 PDE3BQ13370 1112 aa35.23■■■■□ 3.23
SDF2L1-202ENST00000466935 FAM182BQ5T319 152 aa35.23■■■■□ 3.23
SDF2L1-202ENST00000466935 AXIN2Q9Y2T1 843 aa35.23■■■■□ 3.23
SDF2L1-202ENST00000466935 WNK3Q9BYP7 1800 aa35.21■■■■□ 3.23
SDF2L1-202ENST00000466935 NME9Q86XW9 330 aa35.21■■■■□ 3.23
SDF2L1-202ENST00000466935 PCGF6Q9BYE7 350 aa35.21■■■■□ 3.23
SDF2L1-202ENST00000466935 TOM1L2Q6ZVM7 507 aa35.2■■■■□ 3.23
SDF2L1-202ENST00000466935 SOX12O15370 315 aa35.19■■■■□ 3.22
SDF2L1-202ENST00000466935 C11orf95C9JLR9 678 aaPredicted RBP35.18■■■■□ 3.22
SDF2L1-202ENST00000466935 TMF1P82094 1093 aa35.18■■■■□ 3.22
SDF2L1-202ENST00000466935 LTN1O94822 1766 aa35.18■■■■□ 3.22
SDF2L1-202ENST00000466935 OVOS2A0A0J9YW53 1432 aa35.17■■■■□ 3.22
SDF2L1-202ENST00000466935 OVOS2Q6IE36 1432 aa35.17■■■■□ 3.22
SDF2L1-202ENST00000466935 LRRC37A3O60309 1634 aa35.15■■■■□ 3.22
SDF2L1-202ENST00000466935 CDCA7Q9BWT1 371 aaPredicted RBP35.15■■■■□ 3.22
SDF2L1-202ENST00000466935 CARD10Q9BWT7 1032 aa35.14■■■■□ 3.22
SDF2L1-202ENST00000466935 ANKRD36BQ8N2N9 1353 aa35.13■■■■□ 3.21
SDF2L1-202ENST00000466935 CDCA8Q53HL2 280 aa35.12■■■■□ 3.21
SDF2L1-202ENST00000466935 PEAK1Q9H792 1746 aa35.1■■■■□ 3.21
SDF2L1-202ENST00000466935 TRIM37O94972 964 aa35.1■■■■□ 3.21
SDF2L1-202ENST00000466935 CSB-PGBD3P0DP91 1061 aa35.1■■■■□ 3.21
SDF2L1-202ENST00000466935 CCDC7Q96M83 1385 aa35.1■■■■□ 3.21
SDF2L1-202ENST00000466935 PARD3Q8TEW0 1356 aa35.09■■■■□ 3.21
SDF2L1-202ENST00000466935 OVOS2A0A0G2JMS6 1433 aa35.08■■■■□ 3.21
SDF2L1-202ENST00000466935 EN1Q05925 392 aaPredicted RBP35.08■■■■□ 3.21
SDF2L1-202ENST00000466935 DDB1Q16531 1140 aa35.07■■■■□ 3.2
SDF2L1-202ENST00000466935 ERBB3P21860 1342 aa35.05■■■■□ 3.2
SDF2L1-202ENST00000466935 SBF2Q86WG5 1849 aa35.02■■■■□ 3.2
SDF2L1-202ENST00000466935 COG3Q96JB2 828 aa35.02■■■■□ 3.2
SDF2L1-202ENST00000466935 BCL9O00512 1426 aa35.01■■■■□ 3.2
SDF2L1-202ENST00000466935 CAMKK2Q96RR4 588 aa35.01■■■■□ 3.2
SDF2L1-202ENST00000466935 APBA3O96018 575 aa35■■■■□ 3.19
SDF2L1-202ENST00000466935 FAM208AQ9UK61 1670 aaKnown RBP34.99■■■■□ 3.19
SDF2L1-202ENST00000466935 RREB1Q92766 1687 aa34.98■■■■□ 3.19
SDF2L1-202ENST00000466935 MYOM1P52179 1685 aa34.98■■■■□ 3.19
SDF2L1-202ENST00000466935 EZH2Q15910 746 aaKnown RBP34.97■■■■□ 3.19
SDF2L1-202ENST00000466935 CCER1Q8TC90 406 aaPredicted RBP34.97■■■■□ 3.19
SDF2L1-202ENST00000466935 SRCAPQ6ZRS2 3230 aa34.96■■■■□ 3.19
SDF2L1-202ENST00000466935 IP6K1Q92551 441 aa34.96■■■■□ 3.19
SDF2L1-202ENST00000466935 RGPD3A6NKT7 1758 aaPredicted RBP34.95■■■■□ 3.19
SDF2L1-202ENST00000466935 RGPD4Q7Z3J3 1758 aa34.95■■■■□ 3.19
SDF2L1-202ENST00000466935 ANKRD24Q8TF21 1146 aa34.95■■■■□ 3.19
SDF2L1-202ENST00000466935 TNS2Q63HR2 1409 aa34.95■■■■□ 3.19
SDF2L1-202ENST00000466935 KIF20BQ96Q89 1820 aa34.94■■■■□ 3.18
SDF2L1-202ENST00000466935 NLRP2Q9NX02 1062 aa34.93■■■■□ 3.18
SDF2L1-202ENST00000466935 EXOC5O00471 708 aa34.92■■■■□ 3.18
SDF2L1-202ENST00000466935 MARCH10Q8NA82 808 aaPredicted RBP34.92■■■■□ 3.18
SDF2L1-202ENST00000466935 LRP5O75197 1615 aa34.92■■■■□ 3.18
SDF2L1-202ENST00000466935 FYB1O15117 783 aa34.91■■■■□ 3.18
SDF2L1-202ENST00000466935 NUP188Q5SRE5 1749 aa34.9■■■■□ 3.18
SDF2L1-202ENST00000466935 MAP3K19Q56UN5 1328 aa34.89■■■■□ 3.18
SDF2L1-202ENST00000466935 RTL1A6NKG5 1358 aa34.88■■■■□ 3.17
SDF2L1-202ENST00000466935 BCL11BQ9C0K0 894 aaPredicted RBP34.87■■■■□ 3.17
SDF2L1-202ENST00000466935 IL2RBP14784 551 aa34.86■■■■□ 3.17
SDF2L1-202ENST00000466935 PSDA5PKW4 1024 aaPredicted RBP34.85■■■■□ 3.17
SDF2L1-202ENST00000466935 PLSCR1O15162 318 aa34.84■■■■□ 3.17
SDF2L1-202ENST00000466935 HOXC9P31274 260 aa34.84■■■■□ 3.17
SDF2L1-202ENST00000466935 AMPHP49418 695 aa34.83■■■■□ 3.17
SDF2L1-202ENST00000466935 GGNBP2Q9H3C7 697 aa34.83■■■■□ 3.17
SDF2L1-202ENST00000466935 EIF4G2P78344 907 aaKnown RBP eCLIP34.81■■■■□ 3.16
SDF2L1-202ENST00000466935 R3HDM1Q15032 1099 aaKnown RBP34.81■■■■□ 3.16
SDF2L1-202ENST00000466935 NSD3Q9BZ95 1437 aa34.8■■■■□ 3.16
SDF2L1-202ENST00000466935 KIF24Q5T7B8 1368 aa34.79■■■■□ 3.16
SDF2L1-202ENST00000466935 CARD14Q9BXL6 1004 aa34.79■■■■□ 3.16
SDF2L1-202ENST00000466935 NHSQ6T4R5 1651 aa34.78■■■■□ 3.16
SDF2L1-202ENST00000466935 NBPF14Q5TI25 921 aa34.77■■■■□ 3.16
SDF2L1-202ENST00000466935 FBLN1P23142 703 aa34.76■■■■□ 3.16
SDF2L1-202ENST00000466935 LTV1Q96GA3 475 aaPredicted RBP34.75■■■■□ 3.15
SDF2L1-202ENST00000466935 RGPD2P0DJD1 1756 aa34.74■■■■□ 3.15
SDF2L1-202ENST00000466935 RRS1Q15050 365 aaKnown RBP34.74■■■■□ 3.15
SDF2L1-202ENST00000466935 PTF1AQ7RTS3 328 aa34.72■■■■□ 3.15
SDF2L1-202ENST00000466935 SMG6Q86US8 1419 aaKnown RBP34.72■■■■□ 3.15
SDF2L1-202ENST00000466935 HSPA5P11021 654 aaKnown RBP34.71■■■■□ 3.15
SDF2L1-202ENST00000466935 CGNL1Q0VF96 1302 aa34.7■■■■□ 3.15
SDF2L1-202ENST00000466935 INSRP06213 1382 aa34.7■■■■□ 3.15
SDF2L1-202ENST00000466935 FLT4P35916 1363 aa34.7■■■■□ 3.15
SDF2L1-202ENST00000466935 ANKRD26Q9UPS8 1709 aa34.68■■■■□ 3.14
SDF2L1-202ENST00000466935 KAT6BQ8WYB5 2073 aa34.65■■■■□ 3.14
SDF2L1-202ENST00000466935 KCNQ2O43526 872 aa34.63■■■■□ 3.13
SDF2L1-202ENST00000466935 BTAF1O14981 1849 aa34.62■■■■□ 3.13
SDF2L1-202ENST00000466935 SHANK3Q9BYB0 1731 aa34.62■■■■□ 3.13
SDF2L1-202ENST00000466935 PROM2Q8N271 834 aa34.62■■■■□ 3.13
SDF2L1-202ENST00000466935 MEGF6O75095 1541 aa34.61■■■■□ 3.13
SDF2L1-202ENST00000466935 NBPF6Q5VWK0 638 aa34.61■■■■□ 3.13
SDF2L1-202ENST00000466935 NBPF4Q96M43 638 aa34.61■■■■□ 3.13
SDF2L1-202ENST00000466935 POLR3GLQ9BT43 218 aa34.61■■■■□ 3.13
SDF2L1-202ENST00000466935 HSP90AB2PQ58FF8 381 aa34.6■■■■□ 3.13
SDF2L1-202ENST00000466935 MAP2P11137 1827 aaKnown RBP34.6■■■■□ 3.13
SDF2L1-202ENST00000466935 TXNRD1Q16881 649 aa34.59■■■■□ 3.13
SDF2L1-202ENST00000466935 ACSBG1Q96GR2 724 aa34.59■■■■□ 3.13
SDF2L1-202ENST00000466935 ZCRB1Q8TBF4 217 aaKnown RBP34.58■■■■□ 3.13
SDF2L1-202ENST00000466935 DDX54Q8TDD1 881 aaKnown RBP34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 334.8 ms