RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 GSE1Q14687 1217 aa20.1■□□□□ 0.81
SNED1-208ENST00000466618 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
SNED1-208ENST00000466618 SLIT3O75094 1523 aa20.09■□□□□ 0.81
SNED1-208ENST00000466618 HSPA1LP34931 641 aa20.09■□□□□ 0.81
SNED1-208ENST00000466618 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
SNED1-208ENST00000466618 MS4A1P11836 297 aa20.08■□□□□ 0.8
SNED1-208ENST00000466618 EXOC6Q8TAG9 804 aa20.07■□□□□ 0.8
SNED1-208ENST00000466618 FBXO41Q8TF61 875 aa20.07■□□□□ 0.8
SNED1-208ENST00000466618 GCP02774 474 aa20.06■□□□□ 0.8
SNED1-208ENST00000466618 FBLN1P23142 703 aa20.06■□□□□ 0.8
SNED1-208ENST00000466618 RRP1P56182 461 aaKnown RBP20.06■□□□□ 0.8
SNED1-208ENST00000466618 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
SNED1-208ENST00000466618 TNNT2P45379 298 aaPredicted RBP20.05■□□□□ 0.8
SNED1-208ENST00000466618 KCNH5Q8NCM2 988 aa20.05■□□□□ 0.8
SNED1-208ENST00000466618 CABLES1Q8TDN4 633 aa20.05■□□□□ 0.8
SNED1-208ENST00000466618 COL22A1Q8NFW1 1626 aaPredicted RBP20.05■□□□□ 0.8
SNED1-208ENST00000466618 NFAT5O94916 1531 aa20.05■□□□□ 0.8
SNED1-208ENST00000466618 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
SNED1-208ENST00000466618 CRYBG1Q9Y4K1 1723 aa20.05■□□□□ 0.8
SNED1-208ENST00000466618 MYBBP1AQ9BQG0 1328 aaKnown RBP20.05■□□□□ 0.8
SNED1-208ENST00000466618 JCADQ9P266 1359 aa20.04■□□□□ 0.8
SNED1-208ENST00000466618 POLKQ9UBT6 870 aa20.03■□□□□ 0.8
SNED1-208ENST00000466618 PNISRQ8TF01 805 aaKnown RBP20.02■□□□□ 0.8
SNED1-208ENST00000466618 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
SNED1-208ENST00000466618 NFKBIBQ15653 356 aa20.02■□□□□ 0.8
SNED1-208ENST00000466618 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
SNED1-208ENST00000466618 PHRF1Q9P1Y6 1649 aaKnown RBP20.01■□□□□ 0.79
SNED1-208ENST00000466618 SOX12O15370 315 aa20.01■□□□□ 0.79
SNED1-208ENST00000466618 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
SNED1-208ENST00000466618 ARHGEF25Q86VW2 580 aa20■□□□□ 0.79
SNED1-208ENST00000466618 SHPRHQ149N8 1683 aa20■□□□□ 0.79
SNED1-208ENST00000466618 MAP3K19Q56UN5 1328 aa20■□□□□ 0.79
SNED1-208ENST00000466618 PLEKHG5O94827 1062 aa20■□□□□ 0.79
SNED1-208ENST00000466618 CPDO75976 1380 aa19.99■□□□□ 0.79
SNED1-208ENST00000466618 MTHFSP49914 203 aa19.99■□□□□ 0.79
SNED1-208ENST00000466618 DDRGK1Q96HY6 314 aa19.99■□□□□ 0.79
SNED1-208ENST00000466618 EMILIN1Q9Y6C2 1016 aa19.99■□□□□ 0.79
SNED1-208ENST00000466618 ABCA3Q99758 1704 aa19.98■□□□□ 0.79
SNED1-208ENST00000466618 KIF24Q5T7B8 1368 aa19.97■□□□□ 0.79
SNED1-208ENST00000466618 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
SNED1-208ENST00000466618 INSRP06213 1382 aa19.96■□□□□ 0.79
SNED1-208ENST00000466618 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
SNED1-208ENST00000466618 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
SNED1-208ENST00000466618 RTL1A6NKG5 1358 aa19.94■□□□□ 0.78
SNED1-208ENST00000466618 CDK12Q9NYV4 1490 aaPredicted RBP19.93■□□□□ 0.78
SNED1-208ENST00000466618 HAP1P54257 671 aaPredicted RBP19.93■□□□□ 0.78
SNED1-208ENST00000466618 PEAK1Q9H792 1746 aa19.93■□□□□ 0.78
SNED1-208ENST00000466618 FLT4P35916 1363 aa19.93■□□□□ 0.78
SNED1-208ENST00000466618 HOXC9P31274 260 aa19.93■□□□□ 0.78
SNED1-208ENST00000466618 IP6K1Q92551 441 aa19.93■□□□□ 0.78
SNED1-208ENST00000466618 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
SNED1-208ENST00000466618 RCAN3Q9UKA8 241 aa19.92■□□□□ 0.78
SNED1-208ENST00000466618 COL3A1P02461 1466 aaPredicted RBP19.91■□□□□ 0.78
SNED1-208ENST00000466618 MAP2P11137 1827 aaKnown RBP19.91■□□□□ 0.78
SNED1-208ENST00000466618 AMPHP49418 695 aa19.91■□□□□ 0.78
SNED1-208ENST00000466618 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
SNED1-208ENST00000466618 AXIN2Q9Y2T1 843 aa19.91■□□□□ 0.78
SNED1-208ENST00000466618 ABCC6O95255 1503 aa19.9■□□□□ 0.78
SNED1-208ENST00000466618 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
SNED1-208ENST00000466618 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
SNED1-208ENST00000466618 PRDM11Q9NQV5 511 aa19.9■□□□□ 0.78
SNED1-208ENST00000466618 LRP6O75581 1613 aa19.89■□□□□ 0.78
SNED1-208ENST00000466618 NUTM2BA6NNL0 878 aaPredicted RBP19.89■□□□□ 0.77
SNED1-208ENST00000466618 NUTM2EB1AL46 878 aaPredicted RBP19.89■□□□□ 0.77
SNED1-208ENST00000466618 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
SNED1-208ENST00000466618 SKAP1Q86WV1 359 aa19.89■□□□□ 0.77
SNED1-208ENST00000466618 NUTM2AQ8IVF1 878 aaPredicted RBP19.89■□□□□ 0.77
SNED1-208ENST00000466618 LTN1O94822 1766 aa19.88■□□□□ 0.77
SNED1-208ENST00000466618 COL18A1P39060 1754 aa19.88■□□□□ 0.77
SNED1-208ENST00000466618 BLMP54132 1417 aaPredicted RBP19.88■□□□□ 0.77
SNED1-208ENST00000466618 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
SNED1-208ENST00000466618 CFAP53Q96M91 514 aa19.88■□□□□ 0.77
SNED1-208ENST00000466618 ZBTB7CA1YPR0 619 aa19.87■□□□□ 0.77
SNED1-208ENST00000466618 ADAMTS2O95450 1211 aa19.87■□□□□ 0.77
SNED1-208ENST00000466618 LMO7Q8WWI1 1683 aa19.87■□□□□ 0.77
SNED1-208ENST00000466618 IL13P35225 146 aa19.86■□□□□ 0.77
SNED1-208ENST00000466618 EIF4A2Q14240 407 aaKnown RBP19.85■□□□□ 0.77
SNED1-208ENST00000466618 CAMTA1Q9Y6Y1 1673 aa19.85■□□□□ 0.77
SNED1-208ENST00000466618 DIAPH1O60610 1272 aaKnown RBP19.84■□□□□ 0.77
SNED1-208ENST00000466618 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.76
SNED1-208ENST00000466618 ERBB3P21860 1342 aa19.83■□□□□ 0.76
SNED1-208ENST00000466618 ANKRD24Q8TF21 1146 aa19.82■□□□□ 0.76
SNED1-208ENST00000466618 COL5A2P05997 1499 aaPredicted RBP19.81■□□□□ 0.76
SNED1-208ENST00000466618 SLIT2O94813 1529 aa19.81■□□□□ 0.76
SNED1-208ENST00000466618 BTG4Q9NY30 223 aa19.81■□□□□ 0.76
SNED1-208ENST00000466618 FRAT2O75474 233 aaPredicted RBP19.8■□□□□ 0.76
SNED1-208ENST00000466618 FNBP4Q8N3X1 1017 aaPredicted RBP19.8■□□□□ 0.76
SNED1-208ENST00000466618 LTV1Q96GA3 475 aaPredicted RBP19.78■□□□□ 0.76
SNED1-208ENST00000466618 PDE3BQ13370 1112 aa19.78■□□□□ 0.76
SNED1-208ENST00000466618 PKNOX2Q96KN3 472 aa19.78■□□□□ 0.76
SNED1-208ENST00000466618 C8orf37Q96NL8 207 aa19.78■□□□□ 0.76
SNED1-208ENST00000466618 EYA1Q99502 592 aa19.78■□□□□ 0.76
SNED1-208ENST00000466618 WDR17Q8IZU2 1322 aa19.77■□□□□ 0.76
SNED1-208ENST00000466618 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
SNED1-208ENST00000466618 NBPF6Q5VWK0 638 aa19.77■□□□□ 0.75
SNED1-208ENST00000466618 NBPF4Q96M43 638 aa19.77■□□□□ 0.75
SNED1-208ENST00000466618 CRBNQ96SW2 442 aa19.77■□□□□ 0.75
SNED1-208ENST00000466618 RGPD1P0DJD0 1748 aa19.76■□□□□ 0.75
SNED1-208ENST00000466618 PLIN1O60240 522 aa19.76■□□□□ 0.75
SNED1-208ENST00000466618 NGLY1Q96IV0 654 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms