RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SH3D19Q5HYK7 790 aa5.3□□□□□ -1.56
SORT1-202ENST00000466471 CCDC82Q8N4S0 544 aa5.3□□□□□ -1.56
SORT1-202ENST00000466471 TMUB1Q9BVT8 246 aa5.3□□□□□ -1.56
SORT1-202ENST00000466471 NUTM2FA1L443 756 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 RNF223E7ERA6 249 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 TLL1O43897 1013 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 DNAJB2P25686 324 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 SLC19A1P41440 591 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 PTGDRQ13258 359 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 MCM6Q14566 821 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 ZNF787Q6DD87 383 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 DNMT1P26358 1616 aaKnown RBP5.29□□□□□ -1.56
SORT1-202ENST00000466471 FAM135BQ49AJ0 1406 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 IGF1RP08069 1367 aa5.29□□□□□ -1.56
SORT1-202ENST00000466471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.28□□□□□ -1.56
SORT1-202ENST00000466471 ROBO1Q9Y6N7 1651 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 ATP10BO94823 1461 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 DEPDC5O75140 1603 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 LRP6O75581 1613 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 ARID3CA6NKF2 412 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 PPEF1O14829 653 aaPredicted RBP5.28□□□□□ -1.56
SORT1-202ENST00000466471 PDE4CQ08493 712 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 RBM46Q8TBY0 533 aaKnown RBP5.28□□□□□ -1.56
SORT1-202ENST00000466471 EMID1Q96A84 441 aaPredicted RBP5.28□□□□□ -1.56
SORT1-202ENST00000466471 PRR14Q9BWN1 585 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 ADGRG1Q9Y653 693 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 RGS12O14924 1447 aa5.28□□□□□ -1.56
SORT1-202ENST00000466471 ABCA6Q8N139 1617 aa5.27□□□□□ -1.57
SORT1-202ENST00000466471 RCCD1A6NED2 376 aa5.27□□□□□ -1.57
SORT1-202ENST00000466471 TTLL12Q14166 644 aaPredicted RBP5.27□□□□□ -1.57
SORT1-202ENST00000466471 TRIM67Q6ZTA4 783 aa5.27□□□□□ -1.57
SORT1-202ENST00000466471 PROSER2Q86WR7 435 aaPredicted RBP5.27□□□□□ -1.57
SORT1-202ENST00000466471 TRIM52Q96A61 297 aa5.27□□□□□ -1.57
SORT1-202ENST00000466471 PCGF6Q9BYE7 350 aa5.27□□□□□ -1.57
SORT1-202ENST00000466471 TMEM134Q9H6X4 195 aa5.27□□□□□ -1.57
SORT1-202ENST00000466471 MED14O60244 1454 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 PATL2C9JE40 543 aaKnown RBP5.26□□□□□ -1.57
SORT1-202ENST00000466471 S1PR4O95977 384 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 CFHP08603 1231 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 YY1P25490 414 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 SKIV2LQ15477 1246 aaKnown RBP5.26□□□□□ -1.57
SORT1-202ENST00000466471 GIGYF2Q6Y7W6 1299 aaKnown RBP5.26□□□□□ -1.57
SORT1-202ENST00000466471 FNBP4Q8N3X1 1017 aaPredicted RBP5.26□□□□□ -1.57
SORT1-202ENST00000466471 IQGAP1P46940 1657 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 COL16A1Q07092 1604 aaPredicted RBP5.26□□□□□ -1.57
SORT1-202ENST00000466471 A2ML1A8K2U0 1454 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 PHLPP1O60346 1717 aa5.26□□□□□ -1.57
SORT1-202ENST00000466471 SHPRHQ149N8 1683 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 SPDYE5A6NIY4 337 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 ACTN4O43707 911 aaKnown RBP5.25□□□□□ -1.57
SORT1-202ENST00000466471 RAD21O60216 631 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 SLC10A3P09131 477 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 CLCN1P35523 988 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 KMT5BQ4FZB7 885 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 SPRYD7Q5W111 196 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 ZNF772Q68DY9 489 aaPredicted RBP5.25□□□□□ -1.57
SORT1-202ENST00000466471 LIAT1Q6ZQX7 453 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 CCDC97Q96F63 343 aaPredicted RBP5.25□□□□□ -1.57
SORT1-202ENST00000466471 NWD1Q149M9 1564 aa5.25□□□□□ -1.57
SORT1-202ENST00000466471 CTTNBP2Q8WZ74 1663 aa5.24□□□□□ -1.57
SORT1-202ENST00000466471 SENP3-EIF4A1A0A087X0R7 540 aa5.24□□□□□ -1.57
SORT1-202ENST00000466471 ANKLE1Q8NAG6 615 aa5.24□□□□□ -1.57
SORT1-202ENST00000466471 BANK1Q8NDB2 785 aa5.24□□□□□ -1.57
SORT1-202ENST00000466471 CLUAP1Q96AJ1 413 aa5.24□□□□□ -1.57
SORT1-202ENST00000466471 JCADQ9P266 1359 aa5.24□□□□□ -1.57
SORT1-202ENST00000466471 ZC3H13Q5T200 1668 aaKnown RBP5.24□□□□□ -1.57
SORT1-202ENST00000466471 UTRNP46939 3433 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 TNFRSF10AO00220 468 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 PPP1R15AO75807 674 aaPredicted RBP5.23□□□□□ -1.57
SORT1-202ENST00000466471 MS4A1P11836 297 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 PKDCCQ504Y2 493 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 ZNF598Q86UK7 904 aaKnown RBP5.23□□□□□ -1.57
SORT1-202ENST00000466471 ZNF775Q96BV0 537 aaPredicted RBP5.23□□□□□ -1.57
SORT1-202ENST00000466471 GPCPD1Q9NPB8 672 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 CARMIL1Q5VZK9 1371 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 ATAD2Q6PL18 1390 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 GOLGA3Q08378 1498 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 ZNF518AQ6AHZ1 1483 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 LRRC9Q6ZRR7 1453 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 BCL9LQ86UU0 1499 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 KIF14Q15058 1648 aa5.23□□□□□ -1.57
SORT1-202ENST00000466471 POTECB2RU33 542 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 NR1I2O75469 434 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 RXRBP28702 533 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 DIXDC1Q155Q3 683 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 PUS10Q3MIT2 529 aaKnown RBP5.22□□□□□ -1.57
SORT1-202ENST00000466471 ZNF697Q5TEC3 545 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 PPARGC1BQ86YN6 1023 aaKnown RBP5.22□□□□□ -1.57
SORT1-202ENST00000466471 FGD6Q6ZV73 1430 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 KIF27Q86VH2 1401 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 SCAPERQ9BY12 1400 aa5.22□□□□□ -1.57
SORT1-202ENST00000466471 CLTCQ00610 1675 aaKnown RBP5.21□□□□□ -1.57
SORT1-202ENST00000466471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.21□□□□□ -1.58
SORT1-202ENST00000466471 FAM187AA6NFU0 413 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 DGAT1O75907 488 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 ADH1BP00325 375 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 PLA2G2CQ5R387 149 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 SCUBE3Q8IX30 993 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 SLC6A16Q9GZN6 736 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 KDM5DQ9BY66 1539 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms