RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
ABCF3-205ENST00000466416 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
ABCF3-205ENST00000466416 LMO7Q8WWI1 1683 aa13.65□□□□□ -0.22
ABCF3-205ENST00000466416 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
ABCF3-205ENST00000466416 AATKQ6ZMQ8 1374 aa13.63□□□□□ -0.23
ABCF3-205ENST00000466416 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
ABCF3-205ENST00000466416 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
ABCF3-205ENST00000466416 STAC3Q96MF2 364 aa13.62□□□□□ -0.23
ABCF3-205ENST00000466416 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
ABCF3-205ENST00000466416 CEP350Q5VT06 3117 aa13.6□□□□□ -0.23
ABCF3-205ENST00000466416 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
ABCF3-205ENST00000466416 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
ABCF3-205ENST00000466416 EXOC5O00471 708 aa13.59□□□□□ -0.23
ABCF3-205ENST00000466416 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
ABCF3-205ENST00000466416 LRRC37A3O60309 1634 aa13.58□□□□□ -0.24
ABCF3-205ENST00000466416 GRIN3BO60391 1043 aa13.58□□□□□ -0.24
ABCF3-205ENST00000466416 WDR17Q8IZU2 1322 aa13.58□□□□□ -0.24
ABCF3-205ENST00000466416 POLD1P28340 1107 aa13.57□□□□□ -0.24
ABCF3-205ENST00000466416 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
ABCF3-205ENST00000466416 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
ABCF3-205ENST00000466416 NLRP6P59044 892 aa13.56□□□□□ -0.24
ABCF3-205ENST00000466416 DCAF11Q8TEB1 546 aa13.56□□□□□ -0.24
ABCF3-205ENST00000466416 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
ABCF3-205ENST00000466416 HSPA6P17066 643 aa13.55□□□□□ -0.24
ABCF3-205ENST00000466416 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
ABCF3-205ENST00000466416 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
ABCF3-205ENST00000466416 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.25
ABCF3-205ENST00000466416 ZNF827Q17R98 1081 aa13.52□□□□□ -0.25
ABCF3-205ENST00000466416 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.25
ABCF3-205ENST00000466416 TOPAZ1Q8N9V7 1692 aa13.51□□□□□ -0.25
ABCF3-205ENST00000466416 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
ABCF3-205ENST00000466416 ARHGEF25Q86VW2 580 aa13.51□□□□□ -0.25
ABCF3-205ENST00000466416 ACSBG1Q96GR2 724 aa13.51□□□□□ -0.25
ABCF3-205ENST00000466416 GPBP1L1Q9HC44 474 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-205ENST00000466416 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
ABCF3-205ENST00000466416 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
ABCF3-205ENST00000466416 SRPK2P78362 688 aaKnown RBP13.5□□□□□ -0.25
ABCF3-205ENST00000466416 KCNH5Q8NCM2 988 aa13.5□□□□□ -0.25
ABCF3-205ENST00000466416 NLGN2Q8NFZ4 835 aa13.5□□□□□ -0.25
ABCF3-205ENST00000466416 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
ABCF3-205ENST00000466416 SLIT3O75094 1523 aa13.49□□□□□ -0.25
ABCF3-205ENST00000466416 YBX3P16989 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
ABCF3-205ENST00000466416 SLC27A3Q5K4L6 730 aa13.49□□□□□ -0.25
ABCF3-205ENST00000466416 LRRC4BQ9NT99 713 aa13.49□□□□□ -0.25
ABCF3-205ENST00000466416 USP6P35125 1406 aa13.48□□□□□ -0.25
ABCF3-205ENST00000466416 ATP10DQ9P241 1426 aa13.48□□□□□ -0.25
ABCF3-205ENST00000466416 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
ABCF3-205ENST00000466416 PAPPAQ13219 1627 aa13.48□□□□□ -0.25
ABCF3-205ENST00000466416 COL18A1P39060 1754 aa13.48□□□□□ -0.25
ABCF3-205ENST00000466416 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
ABCF3-205ENST00000466416 TNS2Q63HR2 1409 aa13.47□□□□□ -0.25
ABCF3-205ENST00000466416 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
ABCF3-205ENST00000466416 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
ABCF3-205ENST00000466416 PNPLA7Q6ZV29 1317 aa13.46□□□□□ -0.25
ABCF3-205ENST00000466416 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
ABCF3-205ENST00000466416 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
ABCF3-205ENST00000466416 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
ABCF3-205ENST00000466416 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
ABCF3-205ENST00000466416 GOLGB1Q14789 3259 aaKnown RBP13.44□□□□□ -0.26
ABCF3-205ENST00000466416 IL2RBP14784 551 aa13.43□□□□□ -0.26
ABCF3-205ENST00000466416 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
ABCF3-205ENST00000466416 APLP1P51693 650 aa13.42□□□□□ -0.26
ABCF3-205ENST00000466416 TRPM1Q7Z4N2 1603 aa13.42□□□□□ -0.26
ABCF3-205ENST00000466416 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
ABCF3-205ENST00000466416 ABCC6O95255 1503 aa13.41□□□□□ -0.26
ABCF3-205ENST00000466416 SOX12O15370 315 aa13.41□□□□□ -0.26
ABCF3-205ENST00000466416 NLRP2Q9NX02 1062 aa13.41□□□□□ -0.26
ABCF3-205ENST00000466416 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
ABCF3-205ENST00000466416 ADCY9O60503 1353 aa13.41□□□□□ -0.26
ABCF3-205ENST00000466416 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
ABCF3-205ENST00000466416 QSER1Q2KHR3 1735 aa13.4□□□□□ -0.26
ABCF3-205ENST00000466416 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
ABCF3-205ENST00000466416 KAT6BQ8WYB5 2073 aa13.4□□□□□ -0.27
ABCF3-205ENST00000466416 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
ABCF3-205ENST00000466416 BTAF1O14981 1849 aa13.39□□□□□ -0.27
ABCF3-205ENST00000466416 KIF3CO14782 793 aa13.38□□□□□ -0.27
ABCF3-205ENST00000466416 MSH5O43196 834 aa13.38□□□□□ -0.27
ABCF3-205ENST00000466416 DNAJC5GQ8N7S2 189 aa13.38□□□□□ -0.27
ABCF3-205ENST00000466416 ERBB3P21860 1342 aa13.38□□□□□ -0.27
ABCF3-205ENST00000466416 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
ABCF3-205ENST00000466416 HMGB2P26583 209 aaKnown RBP13.37□□□□□ -0.27
ABCF3-205ENST00000466416 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
ABCF3-205ENST00000466416 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
ABCF3-205ENST00000466416 KCNQ4P56696 695 aa13.36□□□□□ -0.27
ABCF3-205ENST00000466416 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
ABCF3-205ENST00000466416 DDX54Q8TDD1 881 aaKnown RBP13.35□□□□□ -0.27
ABCF3-205ENST00000466416 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
ABCF3-205ENST00000466416 TOMM70O94826 608 aa13.34□□□□□ -0.27
ABCF3-205ENST00000466416 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
ABCF3-205ENST00000466416 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
ABCF3-205ENST00000466416 ANKRD24Q8TF21 1146 aa13.34□□□□□ -0.27
ABCF3-205ENST00000466416 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
ABCF3-205ENST00000466416 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
ABCF3-205ENST00000466416 NFAT5O94916 1531 aa13.34□□□□□ -0.27
ABCF3-205ENST00000466416 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
ABCF3-205ENST00000466416 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
ABCF3-205ENST00000466416 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
ABCF3-205ENST00000466416 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
ABCF3-205ENST00000466416 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
ABCF3-205ENST00000466416 COL13A1Q5TAT6 717 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms