RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.16
VPS16-206ENST00000466415 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
VPS16-206ENST00000466415 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
VPS16-206ENST00000466415 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.16
VPS16-206ENST00000466415 NEFMP07197 916 aa16.07■□□□□ 0.16
VPS16-206ENST00000466415 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
VPS16-206ENST00000466415 MAPK8IP3Q9UPT6 1336 aa16.07■□□□□ 0.16
VPS16-206ENST00000466415 ARHGEF25Q86VW2 580 aa16.06■□□□□ 0.16
VPS16-206ENST00000466415 CABLES1Q8TDN4 633 aa16.06■□□□□ 0.16
VPS16-206ENST00000466415 IP6K1Q92551 441 aa16.06■□□□□ 0.16
VPS16-206ENST00000466415 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
VPS16-206ENST00000466415 ZC3H6P61129 1189 aaKnown RBP16.05■□□□□ 0.16
VPS16-206ENST00000466415 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
VPS16-206ENST00000466415 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
VPS16-206ENST00000466415 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
VPS16-206ENST00000466415 LTV1Q96GA3 475 aaPredicted RBP16.04■□□□□ 0.16
VPS16-206ENST00000466415 ABCC6O95255 1503 aa16.04■□□□□ 0.16
VPS16-206ENST00000466415 FCHSD2O94868 740 aa16.03■□□□□ 0.16
VPS16-206ENST00000466415 HMOX1P09601 288 aa16.03■□□□□ 0.16
VPS16-206ENST00000466415 SALL2Q9Y467 1007 aaPredicted RBP16.03■□□□□ 0.16
VPS16-206ENST00000466415 CPDO75976 1380 aa16.02■□□□□ 0.16
VPS16-206ENST00000466415 KIAA0232Q92628 1395 aa16.02■□□□□ 0.16
VPS16-206ENST00000466415 COL22A1Q8NFW1 1626 aaPredicted RBP16.01■□□□□ 0.15
VPS16-206ENST00000466415 APAF1O14727 1248 aa16.01■□□□□ 0.15
VPS16-206ENST00000466415 PRKAR2BP31323 418 aa16.01■□□□□ 0.15
VPS16-206ENST00000466415 RSPH6AQ9H0K4 717 aa16.01■□□□□ 0.15
VPS16-206ENST00000466415 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
VPS16-206ENST00000466415 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
VPS16-206ENST00000466415 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
VPS16-206ENST00000466415 NGEFQ8N5V2 710 aa16■□□□□ 0.15
VPS16-206ENST00000466415 IGSF1Q8N6C5 1336 aa15.99■□□□□ 0.15
VPS16-206ENST00000466415 ANKRD24Q8TF21 1146 aa15.99■□□□□ 0.15
VPS16-206ENST00000466415 CHRNA2Q15822 529 aa15.98■□□□□ 0.15
VPS16-206ENST00000466415 TCP11L2Q8N4U5 519 aa15.98■□□□□ 0.15
VPS16-206ENST00000466415 EYA1Q99502 592 aa15.98■□□□□ 0.15
VPS16-206ENST00000466415 CSB-PGBD3P0DP91 1061 aa15.97■□□□□ 0.15
VPS16-206ENST00000466415 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
VPS16-206ENST00000466415 PLEKHF1Q96S99 279 aa15.97■□□□□ 0.15
VPS16-206ENST00000466415 NEUROD2Q15784 382 aa15.96■□□□□ 0.15
VPS16-206ENST00000466415 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
VPS16-206ENST00000466415 ERBB3P21860 1342 aa15.95■□□□□ 0.14
VPS16-206ENST00000466415 COL18A1P39060 1754 aa15.95■□□□□ 0.14
VPS16-206ENST00000466415 PDE3BQ13370 1112 aa15.95■□□□□ 0.14
VPS16-206ENST00000466415 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
VPS16-206ENST00000466415 KDRP35968 1356 aa15.95■□□□□ 0.14
VPS16-206ENST00000466415 FAM208AQ9UK61 1670 aaKnown RBP15.95■□□□□ 0.14
VPS16-206ENST00000466415 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
VPS16-206ENST00000466415 JCADQ9P266 1359 aa15.94■□□□□ 0.14
VPS16-206ENST00000466415 RGPD5Q99666 1765 aa15.93■□□□□ 0.14
VPS16-206ENST00000466415 LMO7Q8WWI1 1683 aa15.93■□□□□ 0.14
VPS16-206ENST00000466415 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
VPS16-206ENST00000466415 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
VPS16-206ENST00000466415 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
VPS16-206ENST00000466415 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
VPS16-206ENST00000466415 CAMTA1Q9Y6Y1 1673 aa15.92■□□□□ 0.14
VPS16-206ENST00000466415 NBPF6Q5VWK0 638 aa15.92■□□□□ 0.14
VPS16-206ENST00000466415 NBPF4Q96M43 638 aa15.92■□□□□ 0.14
VPS16-206ENST00000466415 NLRP2Q9NX02 1062 aa15.92■□□□□ 0.14
VPS16-206ENST00000466415 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
VPS16-206ENST00000466415 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
VPS16-206ENST00000466415 RIPK4P57078 832 aa15.91■□□□□ 0.14
VPS16-206ENST00000466415 LMOD3Q0VAK6 560 aa15.91■□□□□ 0.14
VPS16-206ENST00000466415 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
VPS16-206ENST00000466415 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
VPS16-206ENST00000466415 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
VPS16-206ENST00000466415 EVA1CP58658 441 aa15.9■□□□□ 0.14
VPS16-206ENST00000466415 GOLGA2Q08379 1002 aa15.9■□□□□ 0.14
VPS16-206ENST00000466415 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
VPS16-206ENST00000466415 PHACTR3Q96KR7 559 aa15.9■□□□□ 0.14
VPS16-206ENST00000466415 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
VPS16-206ENST00000466415 NCAPD2Q15021 1401 aa15.89■□□□□ 0.13
VPS16-206ENST00000466415 ADAMTS2O95450 1211 aa15.89■□□□□ 0.13
VPS16-206ENST00000466415 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
VPS16-206ENST00000466415 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
VPS16-206ENST00000466415 WDR17Q8IZU2 1322 aa15.89■□□□□ 0.13
VPS16-206ENST00000466415 ZNF521Q96K83 1311 aa15.89■□□□□ 0.13
VPS16-206ENST00000466415 FAM83GA6ND36 823 aa15.88■□□□□ 0.13
VPS16-206ENST00000466415 TOM1L2Q6ZVM7 507 aa15.88■□□□□ 0.13
VPS16-206ENST00000466415 HSPA1LP34931 641 aa15.87■□□□□ 0.13
VPS16-206ENST00000466415 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
VPS16-206ENST00000466415 RAPGEF4Q8WZA2 1011 aa15.87■□□□□ 0.13
VPS16-206ENST00000466415 BTG4Q9NY30 223 aa15.87■□□□□ 0.13
VPS16-206ENST00000466415 E9PSI1 815 aa15.86■□□□□ 0.13
VPS16-206ENST00000466415 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
VPS16-206ENST00000466415 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
VPS16-206ENST00000466415 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
VPS16-206ENST00000466415 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
VPS16-206ENST00000466415 TATP17735 454 aaPredicted RBP15.85■□□□□ 0.13
VPS16-206ENST00000466415 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
VPS16-206ENST00000466415 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
VPS16-206ENST00000466415 CDCA7LQ96GN5 454 aa15.85■□□□□ 0.13
VPS16-206ENST00000466415 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
VPS16-206ENST00000466415 AMOTQ4VCS5 1084 aa15.84■□□□□ 0.13
VPS16-206ENST00000466415 RTF1Q92541 710 aaKnown RBP15.84■□□□□ 0.13
VPS16-206ENST00000466415 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
VPS16-206ENST00000466415 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
VPS16-206ENST00000466415 CRB1P82279 1406 aa15.83■□□□□ 0.12
VPS16-206ENST00000466415 SLFN5Q08AF3 891 aa15.82■□□□□ 0.12
VPS16-206ENST00000466415 LARP1Q6PKG0 1096 aaKnown RBP15.82■□□□□ 0.12
VPS16-206ENST00000466415 CARD10Q9BWT7 1032 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms