RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 NLRP6P59044 892 aa21.1■□□□□ 0.97
CXCR4-203ENST00000466288 SRPK2P78362 688 aaKnown RBP21.1■□□□□ 0.97
CXCR4-203ENST00000466288 ATF5Q9Y2D1 282 aaPredicted RBP21.1■□□□□ 0.97
CXCR4-203ENST00000466288 AXIN2Q9Y2T1 843 aa21.1■□□□□ 0.97
CXCR4-203ENST00000466288 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
CXCR4-203ENST00000466288 SLIT3O75094 1523 aa21.09■□□□□ 0.97
CXCR4-203ENST00000466288 WDR17Q8IZU2 1322 aa21.09■□□□□ 0.97
CXCR4-203ENST00000466288 NBPF1Q3BBV0 1214 aa21.08■□□□□ 0.97
CXCR4-203ENST00000466288 USP6P35125 1406 aa21.08■□□□□ 0.96
CXCR4-203ENST00000466288 MYOM1P52179 1685 aa21.08■□□□□ 0.96
CXCR4-203ENST00000466288 TXNRD1Q16881 649 aa21.07■□□□□ 0.96
CXCR4-203ENST00000466288 SYT17Q9BSW7 474 aa21.07■□□□□ 0.96
CXCR4-203ENST00000466288 FHDC1Q9C0D6 1143 aaPredicted RBP21.07■□□□□ 0.96
CXCR4-203ENST00000466288 SLC15A2Q16348 729 aa21.07■□□□□ 0.96
CXCR4-203ENST00000466288 CDCA7Q9BWT1 371 aaPredicted RBP21.07■□□□□ 0.96
CXCR4-203ENST00000466288 CABP1Q9NZU7 370 aa21.07■□□□□ 0.96
CXCR4-203ENST00000466288 STK32BQ9NY57 414 aa21.06■□□□□ 0.96
CXCR4-203ENST00000466288 SGIP1Q9BQI5 828 aa21.05■□□□□ 0.96
CXCR4-203ENST00000466288 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
CXCR4-203ENST00000466288 GOLGB1Q14789 3259 aaKnown RBP21.04■□□□□ 0.96
CXCR4-203ENST00000466288 COL18A1P39060 1754 aa21.04■□□□□ 0.96
CXCR4-203ENST00000466288 ARHGEF25Q86VW2 580 aa21.03■□□□□ 0.96
CXCR4-203ENST00000466288 KIAA1210Q9ULL0 1709 aa21.03■□□□□ 0.96
CXCR4-203ENST00000466288 CARD10Q9BWT7 1032 aa21.02■□□□□ 0.96
CXCR4-203ENST00000466288 MTFR1LQ9H019 292 aa21.02■□□□□ 0.96
CXCR4-203ENST00000466288 CPSF1Q10570 1443 aaKnown RBP21.01■□□□□ 0.95
CXCR4-203ENST00000466288 EXOC5O00471 708 aa20.99■□□□□ 0.95
CXCR4-203ENST00000466288 WNK3Q9BYP7 1800 aa20.99■□□□□ 0.95
CXCR4-203ENST00000466288 PIK3C2AO00443 1686 aa20.98■□□□□ 0.95
CXCR4-203ENST00000466288 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
CXCR4-203ENST00000466288 C1QTNF8P60827 252 aa20.98■□□□□ 0.95
CXCR4-203ENST00000466288 CSB-PGBD3P0DP91 1061 aa20.97■□□□□ 0.95
CXCR4-203ENST00000466288 KCNH5Q8NCM2 988 aa20.96■□□□□ 0.95
CXCR4-203ENST00000466288 ARXQ96QS3 562 aa20.96■□□□□ 0.95
CXCR4-203ENST00000466288 TTC21BQ7Z4L5 1316 aa20.95■□□□□ 0.94
CXCR4-203ENST00000466288 CEP350Q5VT06 3117 aa20.95■□□□□ 0.94
CXCR4-203ENST00000466288 AKAP12Q02952 1782 aa20.95■□□□□ 0.94
CXCR4-203ENST00000466288 SOX12O15370 315 aa20.94■□□□□ 0.94
CXCR4-203ENST00000466288 MAP3K5Q99683 1374 aa20.94■□□□□ 0.94
CXCR4-203ENST00000466288 TNS2Q63HR2 1409 aa20.94■□□□□ 0.94
CXCR4-203ENST00000466288 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
CXCR4-203ENST00000466288 ACSBG1Q96GR2 724 aa20.92■□□□□ 0.94
CXCR4-203ENST00000466288 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
CXCR4-203ENST00000466288 QRICH2Q9H0J4 1663 aa20.9■□□□□ 0.94
CXCR4-203ENST00000466288 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
CXCR4-203ENST00000466288 EVC2Q86UK5 1308 aa20.9■□□□□ 0.94
CXCR4-203ENST00000466288 NFAT5O94916 1531 aa20.9■□□□□ 0.94
CXCR4-203ENST00000466288 PAPPAQ13219 1627 aa20.9■□□□□ 0.94
CXCR4-203ENST00000466288 TTC21AQ8NDW8 1320 aa20.89■□□□□ 0.94
CXCR4-203ENST00000466288 ZNF827Q17R98 1081 aa20.89■□□□□ 0.94
CXCR4-203ENST00000466288 NHSQ6T4R5 1651 aa20.88■□□□□ 0.93
CXCR4-203ENST00000466288 RGPD5Q99666 1765 aa20.88■□□□□ 0.93
CXCR4-203ENST00000466288 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
CXCR4-203ENST00000466288 CHD4Q14839 1912 aa20.87■□□□□ 0.93
CXCR4-203ENST00000466288 ABCC6O95255 1503 aa20.86■□□□□ 0.93
CXCR4-203ENST00000466288 GPR162Q16538 588 aa20.86■□□□□ 0.93
CXCR4-203ENST00000466288 ERBB3P21860 1342 aa20.85■□□□□ 0.93
CXCR4-203ENST00000466288 IL2RBP14784 551 aa20.83■□□□□ 0.93
CXCR4-203ENST00000466288 AKT1S1Q96B36 256 aa20.83■□□□□ 0.93
CXCR4-203ENST00000466288 SLC16A10Q8TF71 515 aa20.82■□□□□ 0.92
CXCR4-203ENST00000466288 NLRP2Q9NX02 1062 aa20.82■□□□□ 0.92
CXCR4-203ENST00000466288 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
CXCR4-203ENST00000466288 GIGYF1O75420 1035 aaPredicted RBP20.81■□□□□ 0.92
CXCR4-203ENST00000466288 IFFO2Q5TF58 517 aa20.81■□□□□ 0.92
CXCR4-203ENST00000466288 USP31Q70CQ4 1352 aa20.8■□□□□ 0.92
CXCR4-203ENST00000466288 BTAF1O14981 1849 aa20.79■□□□□ 0.92
CXCR4-203ENST00000466288 SLC27A3Q5K4L6 730 aa20.78■□□□□ 0.92
CXCR4-203ENST00000466288 KLHL34Q8N239 644 aa20.78■□□□□ 0.92
CXCR4-203ENST00000466288 L3MBTL2Q969R5 705 aa20.78■□□□□ 0.92
CXCR4-203ENST00000466288 PNPLA7Q6ZV29 1317 aa20.78■□□□□ 0.92
CXCR4-203ENST00000466288 POLD1P28340 1107 aa20.77■□□□□ 0.92
CXCR4-203ENST00000466288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.92
CXCR4-203ENST00000466288 ANKRD24Q8TF21 1146 aa20.77■□□□□ 0.92
CXCR4-203ENST00000466288 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
CXCR4-203ENST00000466288 NME9Q86XW9 330 aa20.75■□□□□ 0.91
CXCR4-203ENST00000466288 PELP1Q8IZL8 1130 aaKnown RBP20.75■□□□□ 0.91
CXCR4-203ENST00000466288 KCNQ4P56696 695 aa20.73■□□□□ 0.91
CXCR4-203ENST00000466288 TFCP2L1Q9NZI6 479 aa20.73■□□□□ 0.91
CXCR4-203ENST00000466288 SBNO2Q9Y2G9 1366 aa20.73■□□□□ 0.91
CXCR4-203ENST00000466288 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
CXCR4-203ENST00000466288 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
CXCR4-203ENST00000466288 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
CXCR4-203ENST00000466288 CD163L1Q9NR16 1453 aa20.71■□□□□ 0.91
CXCR4-203ENST00000466288 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
CXCR4-203ENST00000466288 YBX3P16989 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
CXCR4-203ENST00000466288 QSER1Q2KHR3 1735 aa20.71■□□□□ 0.91
CXCR4-203ENST00000466288 MON2Q7Z3U7 1717 aa20.71■□□□□ 0.91
CXCR4-203ENST00000466288 USP54Q70EL1 1684 aa20.71■□□□□ 0.91
CXCR4-203ENST00000466288 GRIN3BO60391 1043 aa20.69■□□□□ 0.9
CXCR4-203ENST00000466288 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
CXCR4-203ENST00000466288 NSD2O96028 1365 aa20.67■□□□□ 0.9
CXCR4-203ENST00000466288 ANKRD36BQ8N2N9 1353 aa20.67■□□□□ 0.9
CXCR4-203ENST00000466288 IP6K1Q92551 441 aa20.67■□□□□ 0.9
CXCR4-203ENST00000466288 SYTL4Q96C24 671 aaPredicted RBP20.67■□□□□ 0.9
CXCR4-203ENST00000466288 LTN1O94822 1766 aa20.66■□□□□ 0.9
CXCR4-203ENST00000466288 COL23A1Q86Y22 540 aaPredicted RBP20.64■□□□□ 0.89
CXCR4-203ENST00000466288 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
CXCR4-203ENST00000466288 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
CXCR4-203ENST00000466288 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
CXCR4-203ENST00000466288 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms