RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
NCL-208ENST00000466274 CTTNBP2Q8WZ74 1663 aa9.91□□□□□ -0.82
NCL-208ENST00000466274 FAM187AA6NFU0 413 aa9.91□□□□□ -0.82
NCL-208ENST00000466274 MYT1Q01538 1121 aa9.91□□□□□ -0.82
NCL-208ENST00000466274 PKD2L1Q9P0L9 805 aa9.91□□□□□ -0.82
NCL-208ENST00000466274 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
NCL-208ENST00000466274 GRIPAP1Q4V328 841 aa9.9□□□□□ -0.82
NCL-208ENST00000466274 SHANK2Q9UPX8 1470 aa9.9□□□□□ -0.83
NCL-208ENST00000466274 REREQ9P2R6 1566 aa9.89□□□□□ -0.83
NCL-208ENST00000466274 RPIAP49247 311 aa9.89□□□□□ -0.83
NCL-208ENST00000466274 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
NCL-208ENST00000466274 C3P01024 1663 aa9.88□□□□□ -0.83
NCL-208ENST00000466274 PRXQ9BXM0 1461 aa9.88□□□□□ -0.83
NCL-208ENST00000466274 KDM4AO75164 1064 aa9.88□□□□□ -0.83
NCL-208ENST00000466274 CD2BP2O95400 341 aaKnown RBP9.88□□□□□ -0.83
NCL-208ENST00000466274 HLA-CQ95604 372 aa9.88□□□□□ -0.83
NCL-208ENST00000466274 CCDC102AQ96A19 550 aa9.88□□□□□ -0.83
NCL-208ENST00000466274 MLH3Q9UHC1 1453 aa9.87□□□□□ -0.83
NCL-208ENST00000466274 MSS51Q4VC12 460 aa9.87□□□□□ -0.83
NCL-208ENST00000466274 ANKLE2Q86XL3 938 aa9.87□□□□□ -0.83
NCL-208ENST00000466274 Q3C1V9 767 aa9.86□□□□□ -0.83
NCL-208ENST00000466274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
NCL-208ENST00000466274 POTECB2RU33 542 aa9.85□□□□□ -0.83
NCL-208ENST00000466274 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
NCL-208ENST00000466274 KDM5CP41229 1560 aa9.84□□□□□ -0.83
NCL-208ENST00000466274 DIP2CQ9Y2E4 1556 aa9.84□□□□□ -0.83
NCL-208ENST00000466274 ST8SIA5O15466 376 aa9.83□□□□□ -0.84
NCL-208ENST00000466274 ZBTB24O43167 697 aaPredicted RBP9.82□□□□□ -0.84
NCL-208ENST00000466274 GUCA2AQ02747 115 aa9.82□□□□□ -0.84
NCL-208ENST00000466274 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
NCL-208ENST00000466274 THEMISQ8N1K5 641 aaPredicted RBP9.82□□□□□ -0.84
NCL-208ENST00000466274 USB1Q9BQ65 265 aaKnown RBP9.82□□□□□ -0.84
NCL-208ENST00000466274 GPCPD1Q9NPB8 672 aa9.82□□□□□ -0.84
NCL-208ENST00000466274 SAMD9Q5K651 1589 aa9.82□□□□□ -0.84
NCL-208ENST00000466274 ARHGAP5Q13017 1502 aa9.82□□□□□ -0.84
NCL-208ENST00000466274 CEP170BQ9Y4F5 1589 aaPredicted RBP9.81□□□□□ -0.84
NCL-208ENST00000466274 A2ML1A8K2U0 1454 aa9.81□□□□□ -0.84
NCL-208ENST00000466274 HOXA2O43364 376 aa9.81□□□□□ -0.84
NCL-208ENST00000466274 CLCN1P35523 988 aa9.81□□□□□ -0.84
NCL-208ENST00000466274 MMP16P51512 607 aa9.81□□□□□ -0.84
NCL-208ENST00000466274 USP46P62068 366 aa9.81□□□□□ -0.84
NCL-208ENST00000466274 ZNF775Q96BV0 537 aaPredicted RBP9.81□□□□□ -0.84
NCL-208ENST00000466274 FAM217BQ9NTX9 383 aaPredicted RBP9.81□□□□□ -0.84
NCL-208ENST00000466274 TOR4AQ9NXH8 423 aa9.81□□□□□ -0.84
NCL-208ENST00000466274 ATP1B4Q9UN42 357 aaPredicted RBP9.81□□□□□ -0.84
NCL-208ENST00000466274 GGT6Q6P531 493 aa9.8□□□□□ -0.84
NCL-208ENST00000466274 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
NCL-208ENST00000466274 KRI1Q8N9T8 703 aaKnown RBP9.8□□□□□ -0.84
NCL-208ENST00000466274 REPIN1Q9BWE0 567 aaKnown RBP9.8□□□□□ -0.84
NCL-208ENST00000466274 AAASQ9NRG9 546 aa9.8□□□□□ -0.84
NCL-208ENST00000466274 SYMPKQ92797 1274 aaKnown RBP9.79□□□□□ -0.84
NCL-208ENST00000466274 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
NCL-208ENST00000466274 CLIP1P30622 1438 aa9.78□□□□□ -0.84
NCL-208ENST00000466274 NPHP4O75161 1426 aaPredicted RBP9.77□□□□□ -0.85
NCL-208ENST00000466274 TRIM32Q13049 653 aa9.77□□□□□ -0.85
NCL-208ENST00000466274 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
NCL-208ENST00000466274 MYO3AQ8NEV4 1616 aa9.77□□□□□ -0.85
NCL-208ENST00000466274 SPAG9O60271 1321 aaKnown RBP9.77□□□□□ -0.85
NCL-208ENST00000466274 MROH2AA6NES4 1674 aa9.77□□□□□ -0.85
NCL-208ENST00000466274 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.85
NCL-208ENST00000466274 FAM135BQ49AJ0 1406 aa9.76□□□□□ -0.85
NCL-208ENST00000466274 ABCA6Q8N139 1617 aa9.76□□□□□ -0.85
NCL-208ENST00000466274 ZNF772Q68DY9 489 aaPredicted RBP9.76□□□□□ -0.85
NCL-208ENST00000466274 NUTM1Q86Y26 1132 aa9.76□□□□□ -0.85
NCL-208ENST00000466274 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
NCL-208ENST00000466274 ALKQ9UM73 1620 aa9.75□□□□□ -0.85
NCL-208ENST00000466274 TTC24A2A3L6 582 aaPredicted RBP9.75□□□□□ -0.85
NCL-208ENST00000466274 CDK13Q14004 1512 aaKnown RBP9.75□□□□□ -0.85
NCL-208ENST00000466274 TNRQ92752 1358 aa9.75□□□□□ -0.85
NCL-208ENST00000466274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.75□□□□□ -0.851e-23■□□□□ 10.8
NCL-208ENST00000466274 LRRC7Q96NW7 1537 aa9.74□□□□□ -0.85
NCL-208ENST00000466274 WNT7AO00755 349 aa9.74□□□□□ -0.85
NCL-208ENST00000466274 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
NCL-208ENST00000466274 TROQ12816 1431 aaPredicted RBP9.73□□□□□ -0.85
NCL-208ENST00000466274 MED14O60244 1454 aa9.73□□□□□ -0.85
NCL-208ENST00000466274 SSTR3P32745 418 aaPredicted RBP9.73□□□□□ -0.85
NCL-208ENST00000466274 BARGINQ6ZT62 677 aa9.73□□□□□ -0.85
NCL-208ENST00000466274 TRIM52Q96A61 297 aa9.73□□□□□ -0.85
NCL-208ENST00000466274 FAM135AQ9P2D6 1515 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 DNMT1P26358 1616 aaKnown RBP9.72□□□□□ -0.85
NCL-208ENST00000466274 ZMYND10O75800 440 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 AVPP01185 164 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 RXRBP28702 533 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 MEX3CQ5U5Q3 659 aaKnown RBP9.72□□□□□ -0.85
NCL-208ENST00000466274 MRGPRX2Q96LB1 330 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 MYO5CQ9NQX4 1742 aa9.72□□□□□ -0.85
NCL-208ENST00000466274 KIF14Q15058 1648 aa9.71□□□□□ -0.85
NCL-208ENST00000466274 RNF17Q9BXT8 1623 aaKnown RBP9.71□□□□□ -0.85
NCL-208ENST00000466274 JUNDP17535 347 aa9.71□□□□□ -0.86
NCL-208ENST00000466274 CRIPAKQ8N1N5 446 aa9.71□□□□□ -0.86
NCL-208ENST00000466274 SNIP1Q8TAD8 396 aaKnown RBP9.71□□□□□ -0.86
NCL-208ENST00000466274 ZC3H15Q8WU90 426 aaKnown RBP9.71□□□□□ -0.86
NCL-208ENST00000466274 AXIN1O15169 862 aa9.7□□□□□ -0.86
NCL-208ENST00000466274 FDX1P10109 184 aa9.7□□□□□ -0.86
NCL-208ENST00000466274 SMPD1P17405 629 aa9.7□□□□□ -0.86
NCL-208ENST00000466274 ZNF777Q9ULD5 760 aaPredicted RBP9.7□□□□□ -0.86
NCL-208ENST00000466274 FMN1Q68DA7 1419 aa9.7□□□□□ -0.86
NCL-208ENST00000466274 A2MP01023 1474 aa9.7□□□□□ -0.86
NCL-208ENST00000466274 NEURL4Q96JN8 1562 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms