RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 BLMP54132 1417 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-203ENST00000465756 CRB1P82279 1406 aa14.63□□□□□ -0.07
NPHP3-203ENST00000465756 WDR17Q8IZU2 1322 aa14.62□□□□□ -0.07
NPHP3-203ENST00000465756 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
NPHP3-203ENST00000465756 PHRF1Q9P1Y6 1649 aaKnown RBP14.62□□□□□ -0.07
NPHP3-203ENST00000465756 BAG6P46379 1132 aa14.62□□□□□ -0.07
NPHP3-203ENST00000465756 FAM98CQ17RN3 349 aaKnown RBP14.62□□□□□ -0.07
NPHP3-203ENST00000465756 IP6K1Q92551 441 aa14.62□□□□□ -0.07
NPHP3-203ENST00000465756 FAM196AQ6ZSG2 479 aa14.61□□□□□ -0.07
NPHP3-203ENST00000465756 CARD10Q9BWT7 1032 aa14.61□□□□□ -0.07
NPHP3-203ENST00000465756 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
NPHP3-203ENST00000465756 PANK3Q9H999 370 aa14.61□□□□□ -0.07
NPHP3-203ENST00000465756 USP35Q9P2H5 1018 aa14.61□□□□□ -0.07
NPHP3-203ENST00000465756 SPATA31A1Q5TZJ5 1347 aa14.61□□□□□ -0.07
NPHP3-203ENST00000465756 CFAP53Q96M91 514 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 ABCA3Q99758 1704 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 PLCH1Q4KWH8 1693 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 EXOC5O00471 708 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 DDB1Q16531 1140 aa14.6□□□□□ -0.07
NPHP3-203ENST00000465756 ANKRD24Q8TF21 1146 aa14.59□□□□□ -0.07
NPHP3-203ENST00000465756 FLT4P35916 1363 aa14.58□□□□□ -0.07
NPHP3-203ENST00000465756 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.08
NPHP3-203ENST00000465756 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.08
NPHP3-203ENST00000465756 FYB1O15117 783 aa14.58□□□□□ -0.08
NPHP3-203ENST00000465756 PPM1GO15355 546 aaPredicted RBP14.58□□□□□ -0.08
NPHP3-203ENST00000465756 NEFMP07197 916 aa14.57□□□□□ -0.08
NPHP3-203ENST00000465756 RGS12O14924 1447 aa14.57□□□□□ -0.08
NPHP3-203ENST00000465756 TATP17735 454 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-203ENST00000465756 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
NPHP3-203ENST00000465756 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
NPHP3-203ENST00000465756 ONECUT3O60422 494 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-203ENST00000465756 IL2RBP14784 551 aa14.56□□□□□ -0.08
NPHP3-203ENST00000465756 PIK3C2AO00443 1686 aa14.56□□□□□ -0.08
NPHP3-203ENST00000465756 KIF7Q2M1P5 1343 aa14.55□□□□□ -0.08
NPHP3-203ENST00000465756 COL5A2P05997 1499 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-203ENST00000465756 WASHC2AQ641Q2 1341 aa14.55□□□□□ -0.08
NPHP3-203ENST00000465756 CD163L1Q9NR16 1453 aa14.55□□□□□ -0.08
NPHP3-203ENST00000465756 NUDCQ9Y266 331 aa14.53□□□□□ -0.08
NPHP3-203ENST00000465756 MAP3K19Q56UN5 1328 aa14.53□□□□□ -0.08
NPHP3-203ENST00000465756 HOXC9P31274 260 aa14.53□□□□□ -0.08
NPHP3-203ENST00000465756 ERBB3P21860 1342 aa14.53□□□□□ -0.08
NPHP3-203ENST00000465756 USP54Q70EL1 1684 aa14.53□□□□□ -0.08
NPHP3-203ENST00000465756 INSRP06213 1382 aa14.52□□□□□ -0.09
NPHP3-203ENST00000465756 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
NPHP3-203ENST00000465756 KIF20BQ96Q89 1820 aa14.51□□□□□ -0.09
NPHP3-203ENST00000465756 UPF1Q92900 1129 aaKnown RBP eCLIP14.51□□□□□ -0.09
NPHP3-203ENST00000465756 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
NPHP3-203ENST00000465756 CAMTA1Q9Y6Y1 1673 aa14.51□□□□□ -0.09
NPHP3-203ENST00000465756 OVOS2A0A0G2JMS6 1433 aa14.51□□□□□ -0.09
NPHP3-203ENST00000465756 CRYBG1Q9Y4K1 1723 aa14.5□□□□□ -0.09
NPHP3-203ENST00000465756 NBPF14Q5TI25 921 aa14.5□□□□□ -0.09
NPHP3-203ENST00000465756 NFAT5O94916 1531 aa14.5□□□□□ -0.09
NPHP3-203ENST00000465756 NPC1L1Q9UHC9 1359 aa14.5□□□□□ -0.09
NPHP3-203ENST00000465756 NRAPQ86VF7 1730 aa14.5□□□□□ -0.09
NPHP3-203ENST00000465756 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
NPHP3-203ENST00000465756 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
NPHP3-203ENST00000465756 HSP90AB1P08238 724 aaKnown RBP14.49□□□□□ -0.09
NPHP3-203ENST00000465756 TNNT2P45379 298 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-203ENST00000465756 GLI3P10071 1580 aa14.48□□□□□ -0.09
NPHP3-203ENST00000465756 RRS1Q15050 365 aaKnown RBP14.48□□□□□ -0.09
NPHP3-203ENST00000465756 PNNQ9H307 717 aaKnown RBP14.48□□□□□ -0.09
NPHP3-203ENST00000465756 CARD14Q9BXL6 1004 aa14.47□□□□□ -0.09
NPHP3-203ENST00000465756 PLEKHG2Q9H7P9 1386 aa14.47□□□□□ -0.09
NPHP3-203ENST00000465756 LMO7Q8WWI1 1683 aa14.47□□□□□ -0.09
NPHP3-203ENST00000465756 ZCRB1Q8TBF4 217 aaKnown RBP14.46□□□□□ -0.09
NPHP3-203ENST00000465756 PLEKHO1Q53GL0 409 aaPredicted RBP14.46□□□□□ -0.09
NPHP3-203ENST00000465756 AMOTQ4VCS5 1084 aa14.44□□□□□ -0.1
NPHP3-203ENST00000465756 CC2D1BQ5T0F9 858 aaKnown RBP14.44□□□□□ -0.1
NPHP3-203ENST00000465756 PCDH11XQ9BZA7 1347 aa14.44□□□□□ -0.1
NPHP3-203ENST00000465756 PCDH11YQ9BZA8 1340 aa14.44□□□□□ -0.1
NPHP3-203ENST00000465756 APBA3O96018 575 aa14.43□□□□□ -0.1
NPHP3-203ENST00000465756 C1orf141Q5JVX7 400 aa14.43□□□□□ -0.1
NPHP3-203ENST00000465756 TNS2Q63HR2 1409 aa14.43□□□□□ -0.1
NPHP3-203ENST00000465756 AXIN2Q9Y2T1 843 aa14.43□□□□□ -0.1
NPHP3-203ENST00000465756 DIAPH1O60610 1272 aaKnown RBP14.43□□□□□ -0.1
NPHP3-203ENST00000465756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.43□□□□□ -0.17e-7■■■□□ 17.7
NPHP3-203ENST00000465756 EMILIN1Q9Y6C2 1016 aa14.42□□□□□ -0.1
NPHP3-203ENST00000465756 MYOM1P52179 1685 aa14.42□□□□□ -0.1
NPHP3-203ENST00000465756 LTN1O94822 1766 aa14.42□□□□□ -0.1
NPHP3-203ENST00000465756 RALBP1Q15311 655 aa14.42□□□□□ -0.1
NPHP3-203ENST00000465756 DDX54Q8TDD1 881 aaKnown RBP14.42□□□□□ -0.1
NPHP3-203ENST00000465756 POLKQ9UBT6 870 aa14.41□□□□□ -0.1
NPHP3-203ENST00000465756 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-203ENST00000465756 BCL11BQ9C0K0 894 aaPredicted RBP14.41□□□□□ -0.1
NPHP3-203ENST00000465756 HSP90AB2PQ58FF8 381 aa14.41□□□□□ -0.1
NPHP3-203ENST00000465756 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
NPHP3-203ENST00000465756 TRIM37O94972 964 aa14.4□□□□□ -0.11
NPHP3-203ENST00000465756 CNGB1Q14028 1251 aaPredicted RBP14.39□□□□□ -0.11
NPHP3-203ENST00000465756 THSD7AQ9UPZ6 1657 aa14.39□□□□□ -0.11
NPHP3-203ENST00000465756 AMER1Q5JTC6 1135 aaPredicted RBP14.39□□□□□ -0.11
NPHP3-203ENST00000465756 IFNL2Q8IZJ0 200 aa14.39□□□□□ -0.11
NPHP3-203ENST00000465756 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
NPHP3-203ENST00000465756 COL18A1P39060 1754 aa14.38□□□□□ -0.11
NPHP3-203ENST00000465756 SYTL4Q96C24 671 aaPredicted RBP14.38□□□□□ -0.11
NPHP3-203ENST00000465756 PARP4Q9UKK3 1724 aaKnown RBP14.37□□□□□ -0.11
NPHP3-203ENST00000465756 BCL9O00512 1426 aa14.37□□□□□ -0.11
NPHP3-203ENST00000465756 STK32BQ9NY57 414 aa14.37□□□□□ -0.11
NPHP3-203ENST00000465756 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms