RNA–Protein interactions for RNA: ENST00000465724.1

C4A-247, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 964 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-247ENST00000465724 MYT1Q01538 1121 aa23.77■■□□□ 1.4
C4A-247ENST00000465724 CSB-PGBD3P0DP91 1061 aa23.76■■□□□ 1.39
C4A-247ENST00000465724 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
C4A-247ENST00000465724 USP35Q9P2H5 1018 aa23.76■■□□□ 1.39
C4A-247ENST00000465724 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
C4A-247ENST00000465724 KNSTRNQ9Y448 316 aa23.76■■□□□ 1.39
C4A-247ENST00000465724 GLI3P10071 1580 aa23.76■■□□□ 1.39
C4A-247ENST00000465724 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
C4A-247ENST00000465724 KIF20BQ96Q89 1820 aa23.75■■□□□ 1.39
C4A-247ENST00000465724 FAM98CQ17RN3 349 aaKnown RBP23.75■■□□□ 1.39
C4A-247ENST00000465724 COL5A2P05997 1499 aaPredicted RBP23.75■■□□□ 1.39
C4A-247ENST00000465724 SPATA31A1Q5TZJ5 1347 aa23.74■■□□□ 1.39
C4A-247ENST00000465724 FBLN1P23142 703 aa23.73■■□□□ 1.39
C4A-247ENST00000465724 AMPHP49418 695 aa23.73■■□□□ 1.39
C4A-247ENST00000465724 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
C4A-247ENST00000465724 SEPT12Q8IYM1 358 aa23.73■■□□□ 1.39
C4A-247ENST00000465724 COL18A1P39060 1754 aa23.71■■□□□ 1.39
C4A-247ENST00000465724 MAP3K19Q56UN5 1328 aa23.71■■□□□ 1.39
C4A-247ENST00000465724 ONECUT3O60422 494 aaPredicted RBP23.71■■□□□ 1.39
C4A-247ENST00000465724 ABCC6O95255 1503 aa23.7■■□□□ 1.38
C4A-247ENST00000465724 WDR17Q8IZU2 1322 aa23.7■■□□□ 1.38
C4A-247ENST00000465724 RRS1Q15050 365 aaKnown RBP23.7■■□□□ 1.38
C4A-247ENST00000465724 TCP11L2Q8N4U5 519 aa23.7■■□□□ 1.38
C4A-247ENST00000465724 IP6K1Q92551 441 aa23.7■■□□□ 1.38
C4A-247ENST00000465724 CRB1P82279 1406 aa23.69■■□□□ 1.38
C4A-247ENST00000465724 THRAP3Q9Y2W1 955 aaKnown RBP23.69■■□□□ 1.38
C4A-247ENST00000465724 LTN1O94822 1766 aa23.69■■□□□ 1.38
C4A-247ENST00000465724 NSD2O96028 1365 aa23.67■■□□□ 1.38
C4A-247ENST00000465724 ANKRD24Q8TF21 1146 aa23.67■■□□□ 1.38
C4A-247ENST00000465724 HOXC9P31274 260 aa23.66■■□□□ 1.38
C4A-247ENST00000465724 BARGINQ6ZT62 677 aa23.66■■□□□ 1.38
C4A-247ENST00000465724 BLMP54132 1417 aaPredicted RBP23.66■■□□□ 1.38
C4A-247ENST00000465724 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
C4A-247ENST00000465724 TNNT2P45379 298 aaPredicted RBP23.65■■□□□ 1.38
C4A-247ENST00000465724 MORC1Q86VD1 984 aa23.65■■□□□ 1.38
C4A-247ENST00000465724 LTV1Q96GA3 475 aaPredicted RBP23.65■■□□□ 1.38
C4A-247ENST00000465724 ERBB3P21860 1342 aa23.64■■□□□ 1.38
C4A-247ENST00000465724 CARD10Q9BWT7 1032 aa23.64■■□□□ 1.37
C4A-247ENST00000465724 NLRP2Q9NX02 1062 aa23.64■■□□□ 1.37
C4A-247ENST00000465724 RTL1A6NKG5 1358 aa23.64■■□□□ 1.37
C4A-247ENST00000465724 PPM1GO15355 546 aaPredicted RBP23.63■■□□□ 1.37
C4A-247ENST00000465724 KRT27Q7Z3Y8 459 aa23.63■■□□□ 1.37
C4A-247ENST00000465724 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
C4A-247ENST00000465724 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
C4A-247ENST00000465724 EMILIN1Q9Y6C2 1016 aa23.6■■□□□ 1.37
C4A-247ENST00000465724 KIF24Q5T7B8 1368 aa23.6■■□□□ 1.37
C4A-247ENST00000465724 ANKRD26Q9UPS8 1709 aa23.59■■□□□ 1.37
C4A-247ENST00000465724 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
C4A-247ENST00000465724 FLT4P35916 1363 aa23.59■■□□□ 1.37
C4A-247ENST00000465724 CC2D1BQ5T0F9 858 aaKnown RBP23.58■■□□□ 1.37
C4A-247ENST00000465724 CDCA7Q9BWT1 371 aaPredicted RBP23.58■■□□□ 1.37
C4A-247ENST00000465724 SMG6Q86US8 1419 aaKnown RBP23.58■■□□□ 1.36
C4A-247ENST00000465724 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
C4A-247ENST00000465724 HSP90AB2PQ58FF8 381 aa23.57■■□□□ 1.36
C4A-247ENST00000465724 POLKQ9UBT6 870 aa23.57■■□□□ 1.36
C4A-247ENST00000465724 INSRP06213 1382 aa23.56■■□□□ 1.36
C4A-247ENST00000465724 UPF1Q92900 1129 aaKnown RBP eCLIP23.56■■□□□ 1.36
C4A-247ENST00000465724 THSD7AQ9UPZ6 1657 aa23.56■■□□□ 1.36
C4A-247ENST00000465724 BRWD3Q6RI45 1802 aa23.56■■□□□ 1.36
C4A-247ENST00000465724 DDB1Q16531 1140 aa23.54■■□□□ 1.36
C4A-247ENST00000465724 MAP2P11137 1827 aaKnown RBP23.53■■□□□ 1.36
C4A-247ENST00000465724 PEAK1Q9H792 1746 aa23.51■■□□□ 1.35
C4A-247ENST00000465724 EXOC5O00471 708 aa23.51■■□□□ 1.35
C4A-247ENST00000465724 IL2RBP14784 551 aa23.51■■□□□ 1.35
C4A-247ENST00000465724 FAM182BQ5T319 152 aa23.51■■□□□ 1.35
C4A-247ENST00000465724 NPC1L1Q9UHC9 1359 aa23.51■■□□□ 1.35
C4A-247ENST00000465724 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
C4A-247ENST00000465724 NBPF6Q5VWK0 638 aa23.48■■□□□ 1.35
C4A-247ENST00000465724 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
C4A-247ENST00000465724 NBPF4Q96M43 638 aa23.48■■□□□ 1.35
C4A-247ENST00000465724 PARP4Q9UKK3 1724 aaKnown RBP23.47■■□□□ 1.35
C4A-247ENST00000465724 SF3B2Q13435 895 aaKnown RBP23.47■■□□□ 1.35
C4A-247ENST00000465724 FAM196AQ6ZSG2 479 aa23.47■■□□□ 1.35
C4A-247ENST00000465724 DISP2A7MBM2 1401 aa23.47■■□□□ 1.35
C4A-247ENST00000465724 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
C4A-247ENST00000465724 DDX10Q13206 875 aaKnown RBP23.45■■□□□ 1.34
C4A-247ENST00000465724 WNK3Q9BYP7 1800 aa23.45■■□□□ 1.34
C4A-247ENST00000465724 RAPGEF4Q8WZA2 1011 aa23.44■■□□□ 1.34
C4A-247ENST00000465724 MTHFSP49914 203 aa23.43■■□□□ 1.34
C4A-247ENST00000465724 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
C4A-247ENST00000465724 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
C4A-247ENST00000465724 RGPD2P0DJD1 1756 aa23.42■■□□□ 1.34
C4A-247ENST00000465724 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
C4A-247ENST00000465724 EYA1Q99502 592 aa23.41■■□□□ 1.34
C4A-247ENST00000465724 MARCH10Q8NA82 808 aaPredicted RBP23.4■■□□□ 1.34
C4A-247ENST00000465724 OVOS2A0A0G2JMS6 1433 aa23.4■■□□□ 1.34
C4A-247ENST00000465724 TNS2Q63HR2 1409 aa23.4■■□□□ 1.34
C4A-247ENST00000465724 TRIM37O94972 964 aa23.38■■□□□ 1.33
C4A-247ENST00000465724 ZCRB1Q8TBF4 217 aaKnown RBP23.38■■□□□ 1.33
C4A-247ENST00000465724 DDX54Q8TDD1 881 aaKnown RBP23.38■■□□□ 1.33
C4A-247ENST00000465724 ZNF316A6NFI3 1004 aaPredicted RBP23.35■■□□□ 1.33
C4A-247ENST00000465724 MEGF6O75095 1541 aa23.34■■□□□ 1.33
C4A-247ENST00000465724 BAG6P46379 1132 aa23.34■■□□□ 1.33
C4A-247ENST00000465724 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
C4A-247ENST00000465724 EP400Q96L91 3159 aa23.33■■□□□ 1.32
C4A-247ENST00000465724 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.32
C4A-247ENST00000465724 IL13P35225 146 aa23.32■■□□□ 1.32
C4A-247ENST00000465724 CFAP53Q96M91 514 aa23.32■■□□□ 1.32
C4A-247ENST00000465724 APBA3O96018 575 aa23.31■■□□□ 1.32
C4A-247ENST00000465724 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms