RNA–Protein interactions for RNA: ENST00000465634.5

TRIM5-208, Transcript of tripartite motif containing 5, human

TSL 1 (best)

Gene TRIM5, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM5-208	ENST00000465634	ADAMTS2	O95450	1211 aa		12.94	□□□□□ -0.34
TRIM5-208	ENST00000465634	HSP90AB2P	Q58FF8	381 aa		12.94	□□□□□ -0.34
TRIM5-208	ENST00000465634	NUDC	Q9Y266	331 aa		12.94	□□□□□ -0.34
TRIM5-208	ENST00000465634	ZBTB7C	A1YPR0	619 aa		12.93	□□□□□ -0.34
TRIM5-208	ENST00000465634	CHRNA2	Q15822	529 aa		12.93	□□□□□ -0.34
TRIM5-208	ENST00000465634	AXIN2	Q9Y2T1	843 aa		12.93	□□□□□ -0.34
TRIM5-208	ENST00000465634	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.92	□□□□□ -0.34
TRIM5-208	ENST00000465634	MRS2	Q9HD23	443 aa		12.92	□□□□□ -0.34
TRIM5-208	ENST00000465634	MAP2	P11137	1827 aa	Known RBP	12.92	□□□□□ -0.34
TRIM5-208	ENST00000465634	IL13	P35225	146 aa		12.91	□□□□□ -0.34
TRIM5-208	ENST00000465634	EIF4A2	Q14240	407 aa	Known RBP	12.91	□□□□□ -0.34
TRIM5-208	ENST00000465634	MEX3C	Q5U5Q3	659 aa	Known RBP	12.91	□□□□□ -0.34
TRIM5-208	ENST00000465634	NGLY1	Q96IV0	654 aa		12.91	□□□□□ -0.34
TRIM5-208	ENST00000465634	BTG4	Q9NY30	223 aa		12.91	□□□□□ -0.34
TRIM5-208	ENST00000465634	COL14A1	Q05707	1796 aa	Known RBP	12.91	□□□□□ -0.34
TRIM5-208	ENST00000465634	ERBB3	P21860	1342 aa		12.9	□□□□□ -0.34
TRIM5-208	ENST00000465634	EVA1C	P58658	441 aa		12.9	□□□□□ -0.34
TRIM5-208	ENST00000465634	ANKRD24	Q8TF21	1146 aa		12.9	□□□□□ -0.34
TRIM5-208	ENST00000465634	LRP6	O75581	1613 aa		12.9	□□□□□ -0.34
TRIM5-208	ENST00000465634	LTN1	O94822	1766 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	SLIT2	O94813	1529 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	PEAK1	Q9H792	1746 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	PNISR	Q8TF01	805 aa	Known RBP	12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	C8orf37	Q96NL8	207 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	COL3A1	P02461	1466 aa	Predicted RBP	12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	LMO7	Q8WWI1	1683 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	CAMTA1	Q9Y6Y1	1673 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	COL18A1	P39060	1754 aa		12.89	□□□□□ -0.35
TRIM5-208	ENST00000465634	WDR17	Q8IZU2	1322 aa		12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	WDR43	Q15061	677 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	CCDC184	Q52MB2	194 aa		12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	ILDR1	Q86SU0	546 aa	Predicted RBP	12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	UNC5CL	Q8IV45	518 aa		12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	PNN	Q9H307	717 aa	Known RBP	12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	COL5A2	P05997	1499 aa	Predicted RBP	12.88	□□□□□ -0.35
TRIM5-208	ENST00000465634	CSB-PGBD3	P0DP91	1061 aa		12.87	□□□□□ -0.35
TRIM5-208	ENST00000465634	LTV1	Q96GA3	475 aa	Predicted RBP	12.87	□□□□□ -0.35
TRIM5-208	ENST00000465634	IGSF1	Q8N6C5	1336 aa		12.87	□□□□□ -0.35
TRIM5-208	ENST00000465634	U2SURP	O15042	1029 aa	Known RBP	12.86	□□□□□ -0.35
TRIM5-208	ENST00000465634	FCHSD2	O94868	740 aa		12.86	□□□□□ -0.35
TRIM5-208	ENST00000465634	EYA1	Q99502	592 aa		12.86	□□□□□ -0.35
TRIM5-208	ENST00000465634	CARD10	Q9BWT7	1032 aa		12.86	□□□□□ -0.35
TRIM5-208	ENST00000465634	USP21	Q9UK80	565 aa		12.86	□□□□□ -0.35
TRIM5-208	ENST00000465634	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	NBPF6	Q5VWK0	638 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	TOM1L2	Q6ZVM7	507 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	NBPF4	Q96M43	638 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	STRN4	Q9NRL3	753 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	NLRP2	Q9NX02	1062 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	THRAP3	Q9Y2W1	955 aa	Known RBP	12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	CRB1	P82279	1406 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	NWD2	Q9ULI1	1742 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	BCL9L	Q86UU0	1499 aa		12.85	□□□□□ -0.35
TRIM5-208	ENST00000465634	PLEKHG2	Q9H7P9	1386 aa		12.84	□□□□□ -0.35
TRIM5-208	ENST00000465634	VPS72	Q15906	364 aa		12.84	□□□□□ -0.35
TRIM5-208	ENST00000465634	ZNF772	Q68DY9	489 aa	Predicted RBP	12.84	□□□□□ -0.35
TRIM5-208	ENST00000465634	LARP1	Q6PKG0	1096 aa	Known RBP	12.84	□□□□□ -0.35
TRIM5-208	ENST00000465634	ADAMTS8	Q9UP79	889 aa		12.84	□□□□□ -0.35
TRIM5-208	ENST00000465634	AFF2	P51816	1311 aa		12.84	□□□□□ -0.35
TRIM5-208	ENST00000465634	KDR	P35968	1356 aa		12.83	□□□□□ -0.36
TRIM5-208	ENST00000465634	NCAPD2	Q15021	1401 aa		12.83	□□□□□ -0.36
TRIM5-208	ENST00000465634	SULT6B1	Q6IMI4	303 aa		12.83	□□□□□ -0.36
TRIM5-208	ENST00000465634	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.82	□□□□□ -0.36
TRIM5-208	ENST00000465634	TRPC5	Q9UL62	973 aa	Predicted RBP	12.82	□□□□□ -0.36
TRIM5-208	ENST00000465634	PLCH1	Q4KWH8	1693 aa		12.82	□□□□□ -0.36
TRIM5-208	ENST00000465634	FAM208A	Q9UK61	1670 aa	Known RBP	12.82	□□□□□ -0.36
TRIM5-208	ENST00000465634	SPATA31A5	Q5VU36	1347 aa		12.82	□□□□□ -0.36
TRIM5-208	ENST00000465634	SPATA31A7	Q8IWB4	1347 aa		12.82	□□□□□ -0.36
TRIM5-208	ENST00000465634	NEFM	P07197	916 aa		12.81	□□□□□ -0.36
TRIM5-208	ENST00000465634	FAM9B	Q8IZU0	186 aa		12.81	□□□□□ -0.36
TRIM5-208	ENST00000465634	TCP11L2	Q8N4U5	519 aa		12.81	□□□□□ -0.36
TRIM5-208	ENST00000465634	RSPH6A	Q9H0K4	717 aa		12.81	□□□□□ -0.36
TRIM5-208	ENST00000465634	SPATA31A1	Q5TZJ5	1347 aa		12.81	□□□□□ -0.36
TRIM5-208	ENST00000465634	RGPD1	P0DJD0	1748 aa		12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	HMOX1	P09601	288 aa		12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	BARGIN	Q6ZT62	677 aa		12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	RAPGEF4	Q8WZA2	1011 aa		12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	RUNDC1	Q96C34	613 aa		12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	QTRT2	Q9H974	415 aa	Known RBP	12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
TRIM5-208	ENST00000465634	NRAP	Q86VF7	1730 aa		12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	RGPD5	Q99666	1765 aa		12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	IL2RB	P14784	551 aa		12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	GJD4	Q96KN9	370 aa	Predicted RBP	12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	PLEKHF1	Q96S99	279 aa		12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	CCDC9	Q9Y3X0	531 aa	Known RBP	12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	ATRN	O75882	1429 aa		12.79	□□□□□ -0.36
TRIM5-208	ENST00000465634	TAT	P17735	454 aa	Predicted RBP	12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	PRKAR2B	P31323	418 aa		12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	AMOT	Q4VCS5	1084 aa		12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	NCBP3	Q53F19	620 aa	Known RBP	12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	AEBP1	Q8IUX7	1158 aa		12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	NGEF	Q8N5V2	710 aa		12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	USHBP1	Q8N6Y0	703 aa		12.78	□□□□□ -0.36
TRIM5-208	ENST00000465634	ONECUT3	O60422	494 aa	Predicted RBP	12.77	□□□□□ -0.37
TRIM5-208	ENST00000465634	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.77	□□□□□ -0.37
TRIM5-208	ENST00000465634	USP35	Q9P2H5	1018 aa		12.77	□□□□□ -0.37
TRIM5-208	ENST00000465634	MAPK8IP3	Q9UPT6	1336 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms