RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
CHPF2-202ENST00000465601 LTN1O94822 1766 aa17.01■□□□□ 0.31
CHPF2-202ENST00000465601 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
CHPF2-202ENST00000465601 GLI3P10071 1580 aa16.99■□□□□ 0.31
CHPF2-202ENST00000465601 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
CHPF2-202ENST00000465601 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
CHPF2-202ENST00000465601 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
CHPF2-202ENST00000465601 MAP3K19Q56UN5 1328 aa16.97■□□□□ 0.31
CHPF2-202ENST00000465601 PER1O15534 1290 aaPredicted RBP16.97■□□□□ 0.31
CHPF2-202ENST00000465601 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
CHPF2-202ENST00000465601 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
CHPF2-202ENST00000465601 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
CHPF2-202ENST00000465601 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.31
CHPF2-202ENST00000465601 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
CHPF2-202ENST00000465601 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
CHPF2-202ENST00000465601 AMPHP49418 695 aa16.96■□□□□ 0.31
CHPF2-202ENST00000465601 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
CHPF2-202ENST00000465601 IP6K1Q92551 441 aa16.96■□□□□ 0.31
CHPF2-202ENST00000465601 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
CHPF2-202ENST00000465601 RGS12O14924 1447 aa16.96■□□□□ 0.3
CHPF2-202ENST00000465601 AMER1Q5JTC6 1135 aaPredicted RBP16.95■□□□□ 0.3
CHPF2-202ENST00000465601 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
CHPF2-202ENST00000465601 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
CHPF2-202ENST00000465601 HOXC9P31274 260 aa16.94■□□□□ 0.3
CHPF2-202ENST00000465601 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
CHPF2-202ENST00000465601 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
CHPF2-202ENST00000465601 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
CHPF2-202ENST00000465601 A0A0G2JS52 829 aa16.93■□□□□ 0.3
CHPF2-202ENST00000465601 MYT1Q01538 1121 aa16.93■□□□□ 0.3
CHPF2-202ENST00000465601 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
CHPF2-202ENST00000465601 LTV1Q96GA3 475 aaPredicted RBP16.93■□□□□ 0.3
CHPF2-202ENST00000465601 NSD2O96028 1365 aa16.92■□□□□ 0.3
CHPF2-202ENST00000465601 ABCC6O95255 1503 aa16.92■□□□□ 0.3
CHPF2-202ENST00000465601 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
CHPF2-202ENST00000465601 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
CHPF2-202ENST00000465601 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
CHPF2-202ENST00000465601 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
CHPF2-202ENST00000465601 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
CHPF2-202ENST00000465601 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
CHPF2-202ENST00000465601 CRB1P82279 1406 aa16.91■□□□□ 0.3
CHPF2-202ENST00000465601 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
CHPF2-202ENST00000465601 ERBB3P21860 1342 aa16.91■□□□□ 0.3
CHPF2-202ENST00000465601 SOCS7O14512 581 aa16.9■□□□□ 0.3
CHPF2-202ENST00000465601 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
CHPF2-202ENST00000465601 POLKQ9UBT6 870 aa16.9■□□□□ 0.3
CHPF2-202ENST00000465601 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
CHPF2-202ENST00000465601 HSP90AB2PQ58FF8 381 aa16.89■□□□□ 0.29
CHPF2-202ENST00000465601 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
CHPF2-202ENST00000465601 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
CHPF2-202ENST00000465601 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.29
CHPF2-202ENST00000465601 PEAK1Q9H792 1746 aa16.89■□□□□ 0.29
CHPF2-202ENST00000465601 RTL1A6NKG5 1358 aa16.88■□□□□ 0.29
CHPF2-202ENST00000465601 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
CHPF2-202ENST00000465601 FLT4P35916 1363 aa16.87■□□□□ 0.29
CHPF2-202ENST00000465601 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
CHPF2-202ENST00000465601 KIF24Q5T7B8 1368 aa16.86■□□□□ 0.29
CHPF2-202ENST00000465601 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
CHPF2-202ENST00000465601 INSRP06213 1382 aa16.85■□□□□ 0.29
CHPF2-202ENST00000465601 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
CHPF2-202ENST00000465601 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
CHPF2-202ENST00000465601 EP400Q96L91 3159 aa16.83■□□□□ 0.29
CHPF2-202ENST00000465601 NBPF6Q5VWK0 638 aa16.83■□□□□ 0.28
CHPF2-202ENST00000465601 NBPF4Q96M43 638 aa16.83■□□□□ 0.28
CHPF2-202ENST00000465601 FAM182BQ5T319 152 aa16.82■□□□□ 0.28
CHPF2-202ENST00000465601 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
CHPF2-202ENST00000465601 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
CHPF2-202ENST00000465601 CDCA7Q9BWT1 371 aaPredicted RBP16.81■□□□□ 0.28
CHPF2-202ENST00000465601 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
CHPF2-202ENST00000465601 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
CHPF2-202ENST00000465601 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
CHPF2-202ENST00000465601 WNK3Q9BYP7 1800 aa16.8■□□□□ 0.28
CHPF2-202ENST00000465601 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
CHPF2-202ENST00000465601 MTHFSP49914 203 aa16.8■□□□□ 0.28
CHPF2-202ENST00000465601 DDB1Q16531 1140 aa16.8■□□□□ 0.28
CHPF2-202ENST00000465601 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
CHPF2-202ENST00000465601 PARP4Q9UKK3 1724 aaKnown RBP16.79■□□□□ 0.28
CHPF2-202ENST00000465601 IL2RBP14784 551 aa16.79■□□□□ 0.28
CHPF2-202ENST00000465601 EIF4A2Q14240 407 aaKnown RBP16.79■□□□□ 0.28
CHPF2-202ENST00000465601 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
CHPF2-202ENST00000465601 EXOC5O00471 708 aa16.78■□□□□ 0.28
CHPF2-202ENST00000465601 EYA1Q99502 592 aa16.77■□□□□ 0.28
CHPF2-202ENST00000465601 LRRC37A3O60309 1634 aa16.75■□□□□ 0.27
CHPF2-202ENST00000465601 MARCH10Q8NA82 808 aaPredicted RBP16.74■□□□□ 0.27
CHPF2-202ENST00000465601 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
CHPF2-202ENST00000465601 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
CHPF2-202ENST00000465601 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
CHPF2-202ENST00000465601 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
CHPF2-202ENST00000465601 IL13P35225 146 aa16.72■□□□□ 0.27
CHPF2-202ENST00000465601 MEGF6O75095 1541 aa16.71■□□□□ 0.27
CHPF2-202ENST00000465601 ZCRB1Q8TBF4 217 aaKnown RBP16.71■□□□□ 0.27
CHPF2-202ENST00000465601 TNS2Q63HR2 1409 aa16.7■□□□□ 0.26
CHPF2-202ENST00000465601 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
CHPF2-202ENST00000465601 TRIM37O94972 964 aa16.7■□□□□ 0.26
CHPF2-202ENST00000465601 DDX54Q8TDD1 881 aaKnown RBP16.7■□□□□ 0.26
CHPF2-202ENST00000465601 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
CHPF2-202ENST00000465601 PARD3Q8TEW0 1356 aa16.69■□□□□ 0.26
CHPF2-202ENST00000465601 CCDC125Q86Z20 511 aa16.69■□□□□ 0.26
CHPF2-202ENST00000465601 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
CHPF2-202ENST00000465601 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
CHPF2-202ENST00000465601 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms