RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 EMILIN1Q9Y6C2 1016 aa7.03□□□□□ -1.28
SNX4-202ENST00000465505 H3BM21 787 aa7.02□□□□□ -1.29
SNX4-202ENST00000465505 RFC5P40937 340 aa7.02□□□□□ -1.29
SNX4-202ENST00000465505 INSM1Q01101 510 aaPredicted RBP7.02□□□□□ -1.29
SNX4-202ENST00000465505 PTK2Q05397 1052 aa7.02□□□□□ -1.29
SNX4-202ENST00000465505 C6orf118Q5T5N4 469 aa7.02□□□□□ -1.29
SNX4-202ENST00000465505 ZBTB33Q86T24 672 aa7.02□□□□□ -1.29
SNX4-202ENST00000465505 GPSM3Q9Y4H4 160 aa7.02□□□□□ -1.29
SNX4-202ENST00000465505 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
SNX4-202ENST00000465505 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
SNX4-202ENST00000465505 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
SNX4-202ENST00000465505 KCTD15Q96SI1 283 aaPredicted RBP7.01□□□□□ -1.29
SNX4-202ENST00000465505 CDV3Q9UKY7 258 aaKnown RBP7.01□□□□□ -1.29
SNX4-202ENST00000465505 UPP2O95045 317 aa7□□□□□ -1.29
SNX4-202ENST00000465505 BMP2P12643 396 aa7□□□□□ -1.29
SNX4-202ENST00000465505 NEUROD2Q15784 382 aa7□□□□□ -1.29
SNX4-202ENST00000465505 IL27Q8NEV9 243 aa7□□□□□ -1.29
SNX4-202ENST00000465505 ADAM32Q8TC27 787 aa7□□□□□ -1.29
SNX4-202ENST00000465505 IRF7Q92985 503 aa7□□□□□ -1.29
SNX4-202ENST00000465505 TSEN34Q9BSV6 310 aaKnown RBP7□□□□□ -1.29
SNX4-202ENST00000465505 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
SNX4-202ENST00000465505 ERBB4Q15303 1308 aa7□□□□□ -1.29
SNX4-202ENST00000465505 MAN1A2O60476 641 aa6.99□□□□□ -1.29
SNX4-202ENST00000465505 GMPRP36959 345 aa6.99□□□□□ -1.29
SNX4-202ENST00000465505 Q6ZVU0 165 aa6.99□□□□□ -1.29
SNX4-202ENST00000465505 SLC10A4Q96EP9 437 aa6.99□□□□□ -1.29
SNX4-202ENST00000465505 PCMTD1Q96MG8 357 aaPredicted RBP6.99□□□□□ -1.29
SNX4-202ENST00000465505 CBLBQ13191 982 aa6.98□□□□□ -1.29
SNX4-202ENST00000465505 TMEM259Q4ZIN3 620 aa6.98□□□□□ -1.29
SNX4-202ENST00000465505 TRIM34Q9BYJ4 488 aa6.98□□□□□ -1.29
SNX4-202ENST00000465505 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
SNX4-202ENST00000465505 STK17AQ9UEE5 414 aa6.98□□□□□ -1.29
SNX4-202ENST00000465505 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
SNX4-202ENST00000465505 DHX9Q08211 1270 aaKnown RBP6.97□□□□□ -1.29
SNX4-202ENST00000465505 INTS6LQ5JSJ4 861 aaKnown RBP6.97□□□□□ -1.29
SNX4-202ENST00000465505 DNMT3LQ9UJW3 386 aa6.97□□□□□ -1.29
SNX4-202ENST00000465505 BRPF1P55201 1214 aaPredicted RBP6.96□□□□□ -1.3
SNX4-202ENST00000465505 PNMA1Q8ND90 353 aa6.96□□□□□ -1.3
SNX4-202ENST00000465505 PPFIA3O75145 1194 aa6.95□□□□□ -1.3
SNX4-202ENST00000465505 VSIG8P0DPA2 414 aa6.95□□□□□ -1.3
SNX4-202ENST00000465505 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
SNX4-202ENST00000465505 SPINT1O43278 529 aa6.94□□□□□ -1.3
SNX4-202ENST00000465505 GJD4Q96KN9 370 aaPredicted RBP6.94□□□□□ -1.3
SNX4-202ENST00000465505 NBPF20Q3BBV1 942 aa6.93□□□□□ -1.3
SNX4-202ENST00000465505 DZIP3Q86Y13 1208 aaKnown RBP6.93□□□□□ -1.3
SNX4-202ENST00000465505 TMPRSS4Q9NRS4 437 aa6.93□□□□□ -1.3
SNX4-202ENST00000465505 FIGNL2A6NMB9 653 aa6.92□□□□□ -1.3
SNX4-202ENST00000465505 ESPNB1AK53 854 aa6.92□□□□□ -1.3
SNX4-202ENST00000465505 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.92□□□□□ -1.3
SNX4-202ENST00000465505 AGBL1Q96MI9 1066 aa6.92□□□□□ -1.3
SNX4-202ENST00000465505 ERVH48-1M5A8F1 160 aa6.91□□□□□ -1.3
SNX4-202ENST00000465505 LILRA1O75019 489 aa6.91□□□□□ -1.3
SNX4-202ENST00000465505 ADD1P35611 737 aaKnown RBP6.91□□□□□ -1.3
SNX4-202ENST00000465505 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
SNX4-202ENST00000465505 ZNF784Q8NCA9 323 aaPredicted RBP6.91□□□□□ -1.3
SNX4-202ENST00000465505 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
SNX4-202ENST00000465505 RAB15P59190 212 aa6.9□□□□□ -1.3
SNX4-202ENST00000465505 RELBQ01201 579 aa6.9□□□□□ -1.3
SNX4-202ENST00000465505 PTSQ03393 145 aa6.9□□□□□ -1.3
SNX4-202ENST00000465505 KDF1Q8NAX2 398 aaPredicted RBP6.9□□□□□ -1.3
SNX4-202ENST00000465505 CTSOP43234 321 aaPredicted RBP6.89□□□□□ -1.31
SNX4-202ENST00000465505 SEPT12Q8IYM1 358 aa6.89□□□□□ -1.31
SNX4-202ENST00000465505 INSM2Q96T92 566 aaPredicted RBP6.89□□□□□ -1.31
SNX4-202ENST00000465505 ZNF395Q9H8N7 513 aaPredicted RBP6.89□□□□□ -1.31
SNX4-202ENST00000465505 GIGYF1O75420 1035 aaPredicted RBP6.88□□□□□ -1.31
SNX4-202ENST00000465505 ADH1AP07327 375 aa6.88□□□□□ -1.31
SNX4-202ENST00000465505 FBXO45P0C2W1 286 aa6.88□□□□□ -1.31
SNX4-202ENST00000465505 GPR161Q8N6U8 529 aaKnown RBP6.88□□□□□ -1.31
SNX4-202ENST00000465505 BANK1Q8NDB2 785 aa6.88□□□□□ -1.31
SNX4-202ENST00000465505 SLC35F4A4IF30 521 aa6.87□□□□□ -1.31
SNX4-202ENST00000465505 PTGIRP43119 386 aa6.87□□□□□ -1.31
SNX4-202ENST00000465505 TPRNQ4KMQ1 711 aa6.87□□□□□ -1.31
SNX4-202ENST00000465505 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
SNX4-202ENST00000465505 GPR37L1O60883 481 aa6.86□□□□□ -1.31
SNX4-202ENST00000465505 CCDC155Q8N6L0 562 aa6.86□□□□□ -1.31
SNX4-202ENST00000465505 MTMR14Q8NCE2 650 aa6.86□□□□□ -1.31
SNX4-202ENST00000465505 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
SNX4-202ENST00000465505 PCDHB9Q9Y5E1 797 aa6.86□□□□□ -1.31
SNX4-202ENST00000465505 SOCS7O14512 581 aa6.85□□□□□ -1.31
SNX4-202ENST00000465505 RNF217Q8TC41 542 aa6.85□□□□□ -1.31
SNX4-202ENST00000465505 POLMQ9NP87 494 aaPredicted RBP6.85□□□□□ -1.31
SNX4-202ENST00000465505 CYLDQ9NQC7 956 aa6.85□□□□□ -1.31
SNX4-202ENST00000465505 SNRKQ9NRH2 765 aa6.85□□□□□ -1.31
SNX4-202ENST00000465505 KRT76Q01546 638 aa6.84□□□□□ -1.31
SNX4-202ENST00000465505 NR1H3Q13133 447 aa6.84□□□□□ -1.31
SNX4-202ENST00000465505 FOXD4L5Q5VV16 416 aaPredicted RBP6.84□□□□□ -1.31
SNX4-202ENST00000465505 SENP3-EIF4A1A0A087X0R7 540 aa6.83□□□□□ -1.32
SNX4-202ENST00000465505 MCCD1P59942 119 aaPredicted RBP6.83□□□□□ -1.32
SNX4-202ENST00000465505 CCDC125Q86Z20 511 aa6.83□□□□□ -1.32
SNX4-202ENST00000465505 ITGA6P23229 1130 aa6.82□□□□□ -1.32
SNX4-202ENST00000465505 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
SNX4-202ENST00000465505 RNF144AP50876 292 aaPredicted RBP6.81□□□□□ -1.32
SNX4-202ENST00000465505 ERVK-9P63128 1117 aa6.81□□□□□ -1.32
SNX4-202ENST00000465505 RNF20Q5VTR2 975 aa6.81□□□□□ -1.32
SNX4-202ENST00000465505 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
SNX4-202ENST00000465505 CNTNAP3BQ96NU0 1288 aa6.81□□□□□ -1.32
SNX4-202ENST00000465505 CNTNAP3Q9BZ76 1288 aa6.81□□□□□ -1.32
SNX4-202ENST00000465505 NDUFB9Q9Y6M9 179 aa6.81□□□□□ -1.32
SNX4-202ENST00000465505 ATP5J2-PTCD1G3V325 749 aa6.8□□□□□ -1.32
SNX4-202ENST00000465505 CC2D2BQ6DHV5 1058 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms