RNA–Protein interactions for RNA: ENST00000464833.1

CHRD-211, Transcript of chordin, humanhuman

TSL 5

Gene CHRD, Length 1,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-211ENST00000464833 RBM6P78332 1123 aaKnown RBP37.87■■■■□ 3.65
CHRD-211ENST00000464833 ILDR2Q71H61 639 aa37.87■■■■□ 3.65
CHRD-211ENST00000464833 AXIN2Q9Y2T1 843 aa37.87■■■■□ 3.65
CHRD-211ENST00000464833 GLI3P10071 1580 aa37.87■■■■□ 3.65
CHRD-211ENST00000464833 RXRBP28702 533 aa37.87■■■■□ 3.65
CHRD-211ENST00000464833 GJD4Q96KN9 370 aaPredicted RBP37.86■■■■□ 3.65
CHRD-211ENST00000464833 MAP3K19Q56UN5 1328 aa37.85■■■■□ 3.65
CHRD-211ENST00000464833 STRN4Q9NRL3 753 aa37.84■■■■□ 3.65
CHRD-211ENST00000464833 CDK12Q9NYV4 1490 aaPredicted RBP37.81■■■■□ 3.64
CHRD-211ENST00000464833 EVA1CP58658 441 aa37.81■■■■□ 3.64
CHRD-211ENST00000464833 RRS1Q15050 365 aaKnown RBP37.8■■■■□ 3.64
CHRD-211ENST00000464833 MAP2P11137 1827 aaKnown RBP37.79■■■■□ 3.64
CHRD-211ENST00000464833 SPATA31A5Q5VU36 1347 aa37.79■■■■□ 3.64
CHRD-211ENST00000464833 SPATA31A7Q8IWB4 1347 aa37.79■■■■□ 3.64
CHRD-211ENST00000464833 NPC1L1Q9UHC9 1359 aa37.79■■■■□ 3.64
CHRD-211ENST00000464833 LARP1Q6PKG0 1096 aaKnown RBP37.78■■■■□ 3.64
CHRD-211ENST00000464833 IP6K1Q92551 441 aa37.78■■■■□ 3.64
CHRD-211ENST00000464833 CCDC9Q9Y3X0 531 aaKnown RBP37.78■■■■□ 3.64
CHRD-211ENST00000464833 PEAK1Q9H792 1746 aa37.77■■■■□ 3.64
CHRD-211ENST00000464833 BLMP54132 1417 aaPredicted RBP37.77■■■■□ 3.64
CHRD-211ENST00000464833 RTL1A6NKG5 1358 aa37.77■■■■□ 3.64
CHRD-211ENST00000464833 SPATA31A1Q5TZJ5 1347 aa37.74■■■■□ 3.63
CHRD-211ENST00000464833 HOXC9P31274 260 aa37.74■■■■□ 3.63
CHRD-211ENST00000464833 AMPHP49418 695 aa37.74■■■■□ 3.63
CHRD-211ENST00000464833 MORC1Q86VD1 984 aa37.74■■■■□ 3.63
CHRD-211ENST00000464833 RGS12O14924 1447 aa37.74■■■■□ 3.63
CHRD-211ENST00000464833 KIF24Q5T7B8 1368 aa37.73■■■■□ 3.63
CHRD-211ENST00000464833 WDR17Q8IZU2 1322 aa37.73■■■■□ 3.63
CHRD-211ENST00000464833 CRB1P82279 1406 aa37.73■■■■□ 3.63
CHRD-211ENST00000464833 ERBB3P21860 1342 aa37.71■■■■□ 3.63
CHRD-211ENST00000464833 TNNT2P45379 298 aaPredicted RBP37.71■■■■□ 3.63
CHRD-211ENST00000464833 CC2D1BQ5T0F9 858 aaKnown RBP37.7■■■■□ 3.63
CHRD-211ENST00000464833 EMILIN1Q9Y6C2 1016 aa37.7■■■■□ 3.63
CHRD-211ENST00000464833 FLT4P35916 1363 aa37.69■■■■□ 3.62
CHRD-211ENST00000464833 POLKQ9UBT6 870 aa37.68■■■■□ 3.62
CHRD-211ENST00000464833 ONECUT3O60422 494 aaPredicted RBP37.67■■■■□ 3.62
CHRD-211ENST00000464833 ANKRD24Q8TF21 1146 aa37.67■■■■□ 3.62
CHRD-211ENST00000464833 DDX10Q13206 875 aaKnown RBP37.65■■■■□ 3.62
CHRD-211ENST00000464833 TOM1L2Q6ZVM7 507 aa37.65■■■■□ 3.62
CHRD-211ENST00000464833 SMG6Q86US8 1419 aaKnown RBP37.65■■■■□ 3.62
CHRD-211ENST00000464833 FAM208AQ9UK61 1670 aaKnown RBP37.65■■■■□ 3.62
CHRD-211ENST00000464833 CSB-PGBD3P0DP91 1061 aa37.64■■■■□ 3.62
CHRD-211ENST00000464833 INSRP06213 1382 aa37.64■■■■□ 3.62
CHRD-211ENST00000464833 THSD7AQ9UPZ6 1657 aa37.63■■■■□ 3.62
CHRD-211ENST00000464833 ZNF316A6NFI3 1004 aaPredicted RBP37.63■■■■□ 3.62
CHRD-211ENST00000464833 USP35Q9P2H5 1018 aa37.63■■■■□ 3.62
CHRD-211ENST00000464833 FAM98CQ17RN3 349 aaKnown RBP37.62■■■■□ 3.61
CHRD-211ENST00000464833 TCP11L2Q8N4U5 519 aa37.62■■■■□ 3.61
CHRD-211ENST00000464833 HSP90AB2PQ58FF8 381 aa37.61■■■■□ 3.61
CHRD-211ENST00000464833 BARGINQ6ZT62 677 aa37.61■■■■□ 3.61
CHRD-211ENST00000464833 CARD10Q9BWT7 1032 aa37.61■■■■□ 3.61
CHRD-211ENST00000464833 THRAP3Q9Y2W1 955 aaKnown RBP37.61■■■■□ 3.61
CHRD-211ENST00000464833 PPM1GO15355 546 aaPredicted RBP37.6■■■■□ 3.61
CHRD-211ENST00000464833 WNK3Q9BYP7 1800 aa37.59■■■■□ 3.61
CHRD-211ENST00000464833 LTV1Q96GA3 475 aaPredicted RBP37.59■■■■□ 3.61
CHRD-211ENST00000464833 BRWD3Q6RI45 1802 aa37.58■■■■□ 3.61
CHRD-211ENST00000464833 SEPT12Q8IYM1 358 aa37.58■■■■□ 3.61
CHRD-211ENST00000464833 RGPD2P0DJD1 1756 aa37.57■■■■□ 3.61
CHRD-211ENST00000464833 CNGB1Q14028 1251 aaPredicted RBP37.57■■■■□ 3.6
CHRD-211ENST00000464833 NLRP2Q9NX02 1062 aa37.56■■■■□ 3.6
CHRD-211ENST00000464833 PARP4Q9UKK3 1724 aaKnown RBP37.51■■■■□ 3.6
CHRD-211ENST00000464833 DISP2A7MBM2 1401 aa37.5■■■■□ 3.59
CHRD-211ENST00000464833 A0A0G2JS52 829 aa37.49■■■■□ 3.59
CHRD-211ENST00000464833 MYT1Q01538 1121 aa37.49■■■■□ 3.59
CHRD-211ENST00000464833 MTHFSP49914 203 aa37.46■■■■□ 3.59
CHRD-211ENST00000464833 NBPF6Q5VWK0 638 aa37.46■■■■□ 3.59
CHRD-211ENST00000464833 NBPF4Q96M43 638 aa37.46■■■■□ 3.59
CHRD-211ENST00000464833 LRRC37A3O60309 1634 aa37.44■■■■□ 3.58
CHRD-211ENST00000464833 PARD3Q8TEW0 1356 aa37.44■■■■□ 3.58
CHRD-211ENST00000464833 EIF4A2Q14240 407 aaKnown RBP37.43■■■■□ 3.58
CHRD-211ENST00000464833 CDCA7Q9BWT1 371 aaPredicted RBP37.43■■■■□ 3.58
CHRD-211ENST00000464833 KRT27Q7Z3Y8 459 aa37.4■■■■□ 3.58
CHRD-211ENST00000464833 NCAPD2Q15021 1401 aa37.4■■■■□ 3.58
CHRD-211ENST00000464833 IL2RBP14784 551 aa37.37■■■■□ 3.57
CHRD-211ENST00000464833 PPP2R1AP30153 589 aa37.37■■■■□ 3.57
CHRD-211ENST00000464833 USHBP1Q8N6Y0 703 aa37.36■■■■□ 3.57
CHRD-211ENST00000464833 EYA1Q99502 592 aa37.36■■■■□ 3.57
CHRD-211ENST00000464833 EP400Q96L91 3159 aa37.34■■■■□ 3.57
CHRD-211ENST00000464833 COL3A1P02461 1466 aaPredicted RBP37.34■■■■□ 3.57
CHRD-211ENST00000464833 SOCS7O14512 581 aa37.34■■■■□ 3.57
CHRD-211ENST00000464833 RGPD1P0DJD0 1748 aa37.33■■■■□ 3.57
CHRD-211ENST00000464833 DDB1Q16531 1140 aa37.33■■■■□ 3.57
CHRD-211ENST00000464833 MEGF6O75095 1541 aa37.32■■■■□ 3.57
CHRD-211ENST00000464833 IL13P35225 146 aa37.32■■■■□ 3.56
CHRD-211ENST00000464833 TNS2Q63HR2 1409 aa37.31■■■■□ 3.56
CHRD-211ENST00000464833 IGSF1Q8N6C5 1336 aa37.31■■■■□ 3.56
CHRD-211ENST00000464833 PDE3BQ13370 1112 aa37.3■■■■□ 3.56
CHRD-211ENST00000464833 RALBP1Q15311 655 aa37.3■■■■□ 3.56
CHRD-211ENST00000464833 OVOS2A0A0G2JMS6 1433 aa37.27■■■■□ 3.56
CHRD-211ENST00000464833 EXOC5O00471 708 aa37.27■■■■□ 3.56
CHRD-211ENST00000464833 FAM182BQ5T319 152 aa37.25■■■■□ 3.55
CHRD-211ENST00000464833 DIAPH1O60610 1272 aaKnown RBP37.24■■■■□ 3.55
CHRD-211ENST00000464833 RAPGEF4Q8WZA2 1011 aa37.24■■■■□ 3.55
CHRD-211ENST00000464833 SHANK3Q9BYB0 1731 aa37.23■■■■□ 3.55
CHRD-211ENST00000464833 MARCH10Q8NA82 808 aaPredicted RBP37.21■■■■□ 3.55
CHRD-211ENST00000464833 CFAP53Q96M91 514 aa37.21■■■■□ 3.55
CHRD-211ENST00000464833 TATP17735 454 aaPredicted RBP37.2■■■■□ 3.55
CHRD-211ENST00000464833 UPF1Q92900 1129 aaKnown RBP eCLIP37.19■■■■□ 3.54
CHRD-211ENST00000464833 PRKRIP1Q9H875 184 aaPredicted RBP37.19■■■■□ 3.54
CHRD-211ENST00000464833 PKD1L3Q7Z443 1732 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms