RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 ANKRD26Q9UPS8 1709 aa27.54■■■□□ 2
CDK11A-211ENST00000464748 GLI3P10071 1580 aa27.53■■■□□ 2
CDK11A-211ENST00000464748 CCDC9Q9Y3X0 531 aaKnown RBP27.53■■■□□ 2
CDK11A-211ENST00000464748 KNSTRNQ9Y448 316 aa27.52■■■□□ 2
CDK11A-211ENST00000464748 STRN4Q9NRL3 753 aa27.51■■□□□ 1.99
CDK11A-211ENST00000464748 SPATA31A5Q5VU36 1347 aa27.5■■□□□ 1.99
CDK11A-211ENST00000464748 SPATA31A7Q8IWB4 1347 aa27.5■■□□□ 1.99
CDK11A-211ENST00000464748 RGS12O14924 1447 aa27.49■■□□□ 1.99
CDK11A-211ENST00000464748 RGPD5Q99666 1765 aa27.48■■□□□ 1.99
CDK11A-211ENST00000464748 BLMP54132 1417 aaPredicted RBP27.48■■□□□ 1.99
CDK11A-211ENST00000464748 RTL1A6NKG5 1358 aa27.47■■□□□ 1.99
CDK11A-211ENST00000464748 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
CDK11A-211ENST00000464748 AXIN2Q9Y2T1 843 aa27.46■■□□□ 1.99
CDK11A-211ENST00000464748 KIF24Q5T7B8 1368 aa27.46■■□□□ 1.99
CDK11A-211ENST00000464748 CRB1P82279 1406 aa27.45■■□□□ 1.98
CDK11A-211ENST00000464748 MAP3K19Q56UN5 1328 aa27.44■■□□□ 1.98
CDK11A-211ENST00000464748 WDR17Q8IZU2 1322 aa27.44■■□□□ 1.98
CDK11A-211ENST00000464748 ONECUT3O60422 494 aaPredicted RBP27.44■■□□□ 1.98
CDK11A-211ENST00000464748 LARP1Q6PKG0 1096 aaKnown RBP27.44■■□□□ 1.98
CDK11A-211ENST00000464748 IP6K1Q92551 441 aa27.44■■□□□ 1.98
CDK11A-211ENST00000464748 PER1O15534 1290 aaPredicted RBP27.42■■□□□ 1.98
CDK11A-211ENST00000464748 AMPHP49418 695 aa27.42■■□□□ 1.98
CDK11A-211ENST00000464748 THRAP3Q9Y2W1 955 aaKnown RBP27.42■■□□□ 1.98
CDK11A-211ENST00000464748 ERBB3P21860 1342 aa27.41■■□□□ 1.98
CDK11A-211ENST00000464748 NPC1L1Q9UHC9 1359 aa27.4■■□□□ 1.98
CDK11A-211ENST00000464748 AMER1Q5JTC6 1135 aaPredicted RBP27.4■■□□□ 1.98
CDK11A-211ENST00000464748 BARGINQ6ZT62 677 aa27.4■■□□□ 1.98
CDK11A-211ENST00000464748 TCP11L2Q8N4U5 519 aa27.4■■□□□ 1.98
CDK11A-211ENST00000464748 FAM208AQ9UK61 1670 aaKnown RBP27.4■■□□□ 1.98
CDK11A-211ENST00000464748 CSB-PGBD3P0DP91 1061 aa27.39■■□□□ 1.98
CDK11A-211ENST00000464748 HOXC9P31274 260 aa27.39■■□□□ 1.98
CDK11A-211ENST00000464748 RRS1Q15050 365 aaKnown RBP27.39■■□□□ 1.98
CDK11A-211ENST00000464748 TOM1L2Q6ZVM7 507 aa27.39■■□□□ 1.98
CDK11A-211ENST00000464748 FLT4P35916 1363 aa27.38■■□□□ 1.97
CDK11A-211ENST00000464748 THSD7AQ9UPZ6 1657 aa27.38■■□□□ 1.97
CDK11A-211ENST00000464748 SOCS7O14512 581 aa27.38■■□□□ 1.97
CDK11A-211ENST00000464748 FAM98CQ17RN3 349 aaKnown RBP27.38■■□□□ 1.97
CDK11A-211ENST00000464748 MAP2P11137 1827 aaKnown RBP27.37■■□□□ 1.97
CDK11A-211ENST00000464748 FBLN1P23142 703 aa27.37■■□□□ 1.97
CDK11A-211ENST00000464748 SEPT12Q8IYM1 358 aa27.37■■□□□ 1.97
CDK11A-211ENST00000464748 MORC1Q86VD1 984 aa27.36■■□□□ 1.97
CDK11A-211ENST00000464748 ANKRD24Q8TF21 1146 aa27.36■■□□□ 1.97
CDK11A-211ENST00000464748 CARD10Q9BWT7 1032 aa27.36■■□□□ 1.97
CDK11A-211ENST00000464748 USP35Q9P2H5 1018 aa27.36■■□□□ 1.97
CDK11A-211ENST00000464748 SMG6Q86US8 1419 aaKnown RBP27.33■■□□□ 1.97
CDK11A-211ENST00000464748 PEAK1Q9H792 1746 aa27.33■■□□□ 1.97
CDK11A-211ENST00000464748 BRWD3Q6RI45 1802 aa27.33■■□□□ 1.97
CDK11A-211ENST00000464748 A0A0G2JS52 829 aa27.33■■□□□ 1.97
CDK11A-211ENST00000464748 MYT1Q01538 1121 aa27.33■■□□□ 1.97
CDK11A-211ENST00000464748 INSRP06213 1382 aa27.33■■□□□ 1.97
CDK11A-211ENST00000464748 CDCA7Q9BWT1 371 aaPredicted RBP27.32■■□□□ 1.96
CDK11A-211ENST00000464748 WNK3Q9BYP7 1800 aa27.32■■□□□ 1.96
CDK11A-211ENST00000464748 EMILIN1Q9Y6C2 1016 aa27.31■■□□□ 1.96
CDK11A-211ENST00000464748 POLKQ9UBT6 870 aa27.3■■□□□ 1.96
CDK11A-211ENST00000464748 PARP4Q9UKK3 1724 aaKnown RBP27.3■■□□□ 1.96
CDK11A-211ENST00000464748 TNNT2P45379 298 aaPredicted RBP27.29■■□□□ 1.96
CDK11A-211ENST00000464748 NLRP2Q9NX02 1062 aa27.29■■□□□ 1.96
CDK11A-211ENST00000464748 KRT27Q7Z3Y8 459 aa27.27■■□□□ 1.96
CDK11A-211ENST00000464748 PPM1GO15355 546 aaPredicted RBP27.26■■□□□ 1.95
CDK11A-211ENST00000464748 HSP90AB2PQ58FF8 381 aa27.26■■□□□ 1.95
CDK11A-211ENST00000464748 CC2D1BQ5T0F9 858 aaKnown RBP27.26■■□□□ 1.95
CDK11A-211ENST00000464748 LTV1Q96GA3 475 aaPredicted RBP27.26■■□□□ 1.95
CDK11A-211ENST00000464748 DISP2A7MBM2 1401 aa27.24■■□□□ 1.95
CDK11A-211ENST00000464748 LRRC37A3O60309 1634 aa27.21■■□□□ 1.95
CDK11A-211ENST00000464748 RGPD2P0DJD1 1756 aa27.21■■□□□ 1.95
CDK11A-211ENST00000464748 IL2RBP14784 551 aa27.19■■□□□ 1.94
CDK11A-211ENST00000464748 PDE3BQ13370 1112 aa27.19■■□□□ 1.94
CDK11A-211ENST00000464748 DDB1Q16531 1140 aa27.18■■□□□ 1.94
CDK11A-211ENST00000464748 NBPF6Q5VWK0 638 aa27.16■■□□□ 1.94
CDK11A-211ENST00000464748 NBPF4Q96M43 638 aa27.16■■□□□ 1.94
CDK11A-211ENST00000464748 TNS2Q63HR2 1409 aa27.16■■□□□ 1.94
CDK11A-211ENST00000464748 DDX10Q13206 875 aaKnown RBP27.15■■□□□ 1.94
CDK11A-211ENST00000464748 UPF1Q92900 1129 aaKnown RBP eCLIP27.15■■□□□ 1.94
CDK11A-211ENST00000464748 NCAPD2Q15021 1401 aa27.14■■□□□ 1.93
CDK11A-211ENST00000464748 EXOC5O00471 708 aa27.13■■□□□ 1.93
CDK11A-211ENST00000464748 EIF4A2Q14240 407 aaKnown RBP27.13■■□□□ 1.93
CDK11A-211ENST00000464748 CCDC125Q86Z20 511 aa27.13■■□□□ 1.93
CDK11A-211ENST00000464748 MTHFSP49914 203 aa27.12■■□□□ 1.93
CDK11A-211ENST00000464748 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
CDK11A-211ENST00000464748 EP400Q96L91 3159 aa27.11■■□□□ 1.93
CDK11A-211ENST00000464748 ZNF316A6NFI3 1004 aaPredicted RBP27.11■■□□□ 1.93
CDK11A-211ENST00000464748 OVOS2A0A0G2JMS6 1433 aa27.1■■□□□ 1.93
CDK11A-211ENST00000464748 CNGB1Q14028 1251 aaPredicted RBP27.1■■□□□ 1.93
CDK11A-211ENST00000464748 RAPGEF4Q8WZA2 1011 aa27.1■■□□□ 1.93
CDK11A-211ENST00000464748 EYA1Q99502 592 aa27.08■■□□□ 1.93
CDK11A-211ENST00000464748 PLEKHG2Q9H7P9 1386 aa27.08■■□□□ 1.93
CDK11A-211ENST00000464748 BCL9O00512 1426 aa27.07■■□□□ 1.92
CDK11A-211ENST00000464748 MEGF6O75095 1541 aa27.07■■□□□ 1.92
CDK11A-211ENST00000464748 USHBP1Q8N6Y0 703 aa27.07■■□□□ 1.92
CDK11A-211ENST00000464748 IGSF1Q8N6C5 1336 aa27.07■■□□□ 1.92
CDK11A-211ENST00000464748 PARD3Q8TEW0 1356 aa27.07■■□□□ 1.92
CDK11A-211ENST00000464748 TATP17735 454 aaPredicted RBP27.06■■□□□ 1.92
CDK11A-211ENST00000464748 RGPD1P0DJD0 1748 aa27.05■■□□□ 1.92
CDK11A-211ENST00000464748 FAM182BQ5T319 152 aa27.04■■□□□ 1.92
CDK11A-211ENST00000464748 PPP2R1AP30153 589 aa27.03■■□□□ 1.92
CDK11A-211ENST00000464748 IL13P35225 146 aa27.03■■□□□ 1.92
CDK11A-211ENST00000464748 SF3B2Q13435 895 aaKnown RBP27.03■■□□□ 1.92
CDK11A-211ENST00000464748 MARCH10Q8NA82 808 aaPredicted RBP27.03■■□□□ 1.92
CDK11A-211ENST00000464748 RALBP1Q15311 655 aa27.02■■□□□ 1.92
CDK11A-211ENST00000464748 ZCRB1Q8TBF4 217 aaKnown RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms