RNA–Protein interactions for RNA: ENST00000464710.1

IL6-208, Transcript of interleukin 6, human

TSL 4

Gene IL6, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IL6-208	ENST00000464710	AATK	Q6ZMQ8	1374 aa		11.27	□□□□□ -0.61
IL6-208	ENST00000464710	DIEXF	Q68CQ4	756 aa	Known RBP	11.26	□□□□□ -0.61
IL6-208	ENST00000464710	CFAP53	Q96M91	514 aa		11.26	□□□□□ -0.61
IL6-208	ENST00000464710	NLRP2	Q9NX02	1062 aa		11.26	□□□□□ -0.61
IL6-208	ENST00000464710	TRPC5	Q9UL62	973 aa	Predicted RBP	11.26	□□□□□ -0.61
IL6-208	ENST00000464710	SLIT3	O75094	1523 aa		11.25	□□□□□ -0.61
IL6-208	ENST00000464710	LARP1	Q6PKG0	1096 aa	Known RBP	11.25	□□□□□ -0.61
IL6-208	ENST00000464710	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.25	□□□□□ -0.61
IL6-208	ENST00000464710		A0A0G2JS52	829 aa		11.24	□□□□□ -0.61
IL6-208	ENST00000464710	MYT1	Q01538	1121 aa		11.24	□□□□□ -0.61
IL6-208	ENST00000464710	RGS17	Q9UGC6	210 aa	Predicted RBP	11.24	□□□□□ -0.61
IL6-208	ENST00000464710	KIF20B	Q96Q89	1820 aa		11.23	□□□□□ -0.61
IL6-208	ENST00000464710	RXRB	P28702	533 aa		11.23	□□□□□ -0.61
IL6-208	ENST00000464710	VPS72	Q15906	364 aa		11.23	□□□□□ -0.61
IL6-208	ENST00000464710	POTEA	Q6S8J7	498 aa		11.23	□□□□□ -0.61
IL6-208	ENST00000464710	GJD4	Q96KN9	370 aa	Predicted RBP	11.23	□□□□□ -0.61
IL6-208	ENST00000464710	DIAPH1	O60610	1272 aa	Known RBP	11.22	□□□□□ -0.61
IL6-208	ENST00000464710	FLT4	P35916	1363 aa		11.22	□□□□□ -0.61
IL6-208	ENST00000464710	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.22	□□□□□ -0.61
IL6-208	ENST00000464710	NFAT5	O94916	1531 aa		11.21	□□□□□ -0.61
IL6-208	ENST00000464710	WDR17	Q8IZU2	1322 aa		11.21	□□□□□ -0.61
IL6-208	ENST00000464710	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.21	□□□□□ -0.61
IL6-208	ENST00000464710	U2SURP	O15042	1029 aa	Known RBP	11.21	□□□□□ -0.61
IL6-208	ENST00000464710	RBM6	P78332	1123 aa	Known RBP	11.21	□□□□□ -0.61
IL6-208	ENST00000464710	EIF4A2	Q14240	407 aa	Known RBP	11.21	□□□□□ -0.61
IL6-208	ENST00000464710	NUDC	Q9Y266	331 aa		11.21	□□□□□ -0.61
IL6-208	ENST00000464710	CAMTA1	Q9Y6Y1	1673 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	SLIT2	O94813	1529 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	BCL9L	Q86UU0	1499 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	INSR	P06213	1382 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	KIF24	Q5T7B8	1368 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	PARD3	Q8TEW0	1356 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	FAM98C	Q17RN3	349 aa	Known RBP	11.2	□□□□□ -0.62
IL6-208	ENST00000464710	NBPF6	Q5VWK0	638 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	TCP11L2	Q8N4U5	519 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	USHBP1	Q8N6Y0	703 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	NBPF4	Q96M43	638 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	CARD10	Q9BWT7	1032 aa		11.2	□□□□□ -0.62
IL6-208	ENST00000464710	BLM	P54132	1417 aa	Predicted RBP	11.19	□□□□□ -0.62
IL6-208	ENST00000464710	SMG6	Q86US8	1419 aa	Known RBP	11.19	□□□□□ -0.62
IL6-208	ENST00000464710	RTL1	A6NKG5	1358 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	COL14A1	Q05707	1796 aa	Known RBP	11.19	□□□□□ -0.62
IL6-208	ENST00000464710	ERBB3	P21860	1342 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	SPATA31A1	Q5TZJ5	1347 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	SPATA31A5	Q5VU36	1347 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	SPATA31A7	Q8IWB4	1347 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	IL13	P35225	146 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	EYA1	Q99502	592 aa		11.19	□□□□□ -0.62
IL6-208	ENST00000464710	MAP2	P11137	1827 aa	Known RBP	11.19	□□□□□ -0.62
IL6-208	ENST00000464710	MARF1	Q9Y4F3	1742 aa	Known RBP	11.18	□□□□□ -0.62
IL6-208	ENST00000464710	THRAP3	Q9Y2W1	955 aa	Known RBP	11.18	□□□□□ -0.62
IL6-208	ENST00000464710	ABCA3	Q99758	1704 aa		11.18	□□□□□ -0.62
IL6-208	ENST00000464710	CRYBG1	Q9Y4K1	1723 aa		11.18	□□□□□ -0.62
IL6-208	ENST00000464710	HMOX1	P09601	288 aa		11.17	□□□□□ -0.62
IL6-208	ENST00000464710	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.17	□□□□□ -0.62
IL6-208	ENST00000464710	TAT	P17735	454 aa	Predicted RBP	11.17	□□□□□ -0.62
IL6-208	ENST00000464710	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
IL6-208	ENST00000464710	SULT6B1	Q6IMI4	303 aa		11.17	□□□□□ -0.62
IL6-208	ENST00000464710	RAPGEF4	Q8WZA2	1011 aa		11.17	□□□□□ -0.62
IL6-208	ENST00000464710	COL5A2	P05997	1499 aa	Predicted RBP	11.17	□□□□□ -0.62
IL6-208	ENST00000464710	USP54	Q70EL1	1684 aa		11.17	□□□□□ -0.62
IL6-208	ENST00000464710	CRB1	P82279	1406 aa		11.17	□□□□□ -0.62
IL6-208	ENST00000464710	ANKRD26	Q9UPS8	1709 aa		11.16	□□□□□ -0.62
IL6-208	ENST00000464710	EXOC5	O00471	708 aa		11.16	□□□□□ -0.62
IL6-208	ENST00000464710	IL2RB	P14784	551 aa		11.16	□□□□□ -0.62
IL6-208	ENST00000464710	WDR43	Q15061	677 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
IL6-208	ENST00000464710	SEPT12	Q8IYM1	358 aa		11.16	□□□□□ -0.62
IL6-208	ENST00000464710	MRS2	Q9HD23	443 aa		11.16	□□□□□ -0.62
IL6-208	ENST00000464710	ATRN	O75882	1429 aa		11.16	□□□□□ -0.62
IL6-208	ENST00000464710	PDE3B	Q13370	1112 aa		11.15	□□□□□ -0.62
IL6-208	ENST00000464710	BARGIN	Q6ZT62	677 aa		11.15	□□□□□ -0.62
IL6-208	ENST00000464710	MIER1	Q8N108	512 aa		11.15	□□□□□ -0.62
IL6-208	ENST00000464710	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.15	□□□□□ -0.62
IL6-208	ENST00000464710	LTN1	O94822	1766 aa		11.15	□□□□□ -0.62
IL6-208	ENST00000464710	COL18A1	P39060	1754 aa		11.15	□□□□□ -0.62
IL6-208	ENST00000464710	DDB1	Q16531	1140 aa		11.14	□□□□□ -0.63
IL6-208	ENST00000464710	CCDC184	Q52MB2	194 aa		11.14	□□□□□ -0.63
IL6-208	ENST00000464710	DDX54	Q8TDD1	881 aa	Known RBP	11.14	□□□□□ -0.63
IL6-208	ENST00000464710	RGPD5	Q99666	1765 aa		11.13	□□□□□ -0.63
IL6-208	ENST00000464710	ONECUT3	O60422	494 aa	Predicted RBP	11.13	□□□□□ -0.63
IL6-208	ENST00000464710	NEFM	P07197	916 aa		11.13	□□□□□ -0.63
IL6-208	ENST00000464710	AEBP1	Q8IUX7	1158 aa		11.13	□□□□□ -0.63
IL6-208	ENST00000464710	PLCH1	Q4KWH8	1693 aa		11.13	□□□□□ -0.63
IL6-208	ENST00000464710	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.12	□□□□□ -0.63
IL6-208	ENST00000464710	PEAK1	Q9H792	1746 aa		11.12	□□□□□ -0.63
IL6-208	ENST00000464710	LMO7	Q8WWI1	1683 aa		11.12	□□□□□ -0.63
IL6-208	ENST00000464710	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.12	□□□□□ -0.63
IL6-208	ENST00000464710	ZCRB1	Q8TBF4	217 aa	Known RBP	11.12	□□□□□ -0.63
IL6-208	ENST00000464710	PNN	Q9H307	717 aa	Known RBP	11.12	□□□□□ -0.63
IL6-208	ENST00000464710	SPG7	Q9UQ90	795 aa		11.12	□□□□□ -0.63
IL6-208	ENST00000464710	NWD2	Q9ULI1	1742 aa		11.12	□□□□□ -0.63
IL6-208	ENST00000464710	IGSF1	Q8N6C5	1336 aa		11.11	□□□□□ -0.63
IL6-208	ENST00000464710	ABCC6	O95255	1503 aa		11.11	□□□□□ -0.63
IL6-208	ENST00000464710	FCHSD2	O94868	740 aa		11.11	□□□□□ -0.63
IL6-208	ENST00000464710	FAM9B	Q8IZU0	186 aa		11.11	□□□□□ -0.63
IL6-208	ENST00000464710	PRKAR2B	P31323	418 aa		11.1	□□□□□ -0.63
IL6-208	ENST00000464710	FAM182B	Q5T319	152 aa		11.1	□□□□□ -0.63
IL6-208	ENST00000464710	KRT27	Q7Z3Y8	459 aa		11.1	□□□□□ -0.63
IL6-208	ENST00000464710	ADAMTS8	Q9UP79	889 aa		11.1	□□□□□ -0.63
IL6-208	ENST00000464710	AMOT	Q4VCS5	1084 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms