RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 HOXC9P31274 260 aa23.82■■□□□ 1.4
LST1-220ENST00000464526 HSP90AB2PQ58FF8 381 aa23.82■■□□□ 1.4
LST1-220ENST00000464526 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
LST1-220ENST00000464526 DIEXFQ68CQ4 756 aaKnown RBP23.81■■□□□ 1.4
LST1-220ENST00000464526 BTG4Q9NY30 223 aa23.81■■□□□ 1.4
LST1-220ENST00000464526 COL5A2P05997 1499 aaPredicted RBP23.81■■□□□ 1.4
LST1-220ENST00000464526 MTHFSP49914 203 aa23.8■■□□□ 1.4
LST1-220ENST00000464526 NGLY1Q96IV0 654 aa23.8■■□□□ 1.4
LST1-220ENST00000464526 RGPD2P0DJD1 1756 aa23.79■■□□□ 1.4
LST1-220ENST00000464526 AFF2P51816 1311 aa23.79■■□□□ 1.4
LST1-220ENST00000464526 COL3A1P02461 1466 aaPredicted RBP23.79■■□□□ 1.4
LST1-220ENST00000464526 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
LST1-220ENST00000464526 CDK12Q9NYV4 1490 aaPredicted RBP23.78■■□□□ 1.4
LST1-220ENST00000464526 AMPHP49418 695 aa23.78■■□□□ 1.4
LST1-220ENST00000464526 FLT4P35916 1363 aa23.78■■□□□ 1.4
LST1-220ENST00000464526 CCDC184Q52MB2 194 aa23.77■■□□□ 1.4
LST1-220ENST00000464526 LTV1Q96GA3 475 aaPredicted RBP23.77■■□□□ 1.4
LST1-220ENST00000464526 IP6K1Q92551 441 aa23.77■■□□□ 1.4
LST1-220ENST00000464526 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
LST1-220ENST00000464526 ABCC6O95255 1503 aa23.76■■□□□ 1.39
LST1-220ENST00000464526 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
LST1-220ENST00000464526 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
LST1-220ENST00000464526 STRN4Q9NRL3 753 aa23.75■■□□□ 1.39
LST1-220ENST00000464526 RALBP1Q15311 655 aa23.75■■□□□ 1.39
LST1-220ENST00000464526 ERBB3P21860 1342 aa23.74■■□□□ 1.39
LST1-220ENST00000464526 MYBBP1AQ9BQG0 1328 aaKnown RBP23.74■■□□□ 1.39
LST1-220ENST00000464526 LARP1Q6PKG0 1096 aaKnown RBP23.73■■□□□ 1.39
LST1-220ENST00000464526 BLMP54132 1417 aaPredicted RBP23.73■■□□□ 1.39
LST1-220ENST00000464526 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.73■■□□□ 1.39
LST1-220ENST00000464526 INSRP06213 1382 aa23.72■■□□□ 1.39
LST1-220ENST00000464526 ANP32CO43423 234 aa23.72■■□□□ 1.39
LST1-220ENST00000464526 ANKRD24Q8TF21 1146 aa23.72■■□□□ 1.39
LST1-220ENST00000464526 USP21Q9UK80 565 aa23.72■■□□□ 1.39
LST1-220ENST00000464526 EIF4A2Q14240 407 aaKnown RBP23.71■■□□□ 1.39
LST1-220ENST00000464526 KIF24Q5T7B8 1368 aa23.7■■□□□ 1.38
LST1-220ENST00000464526 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
LST1-220ENST00000464526 USHBP1Q8N6Y0 703 aa23.68■■□□□ 1.38
LST1-220ENST00000464526 FAM208AQ9UK61 1670 aaKnown RBP23.68■■□□□ 1.38
LST1-220ENST00000464526 GLI3P10071 1580 aa23.68■■□□□ 1.38
LST1-220ENST00000464526 RGPD1P0DJD0 1748 aa23.68■■□□□ 1.38
LST1-220ENST00000464526 WDR17Q8IZU2 1322 aa23.67■■□□□ 1.38
LST1-220ENST00000464526 MIER1Q8N108 512 aa23.67■■□□□ 1.38
LST1-220ENST00000464526 ATRNO75882 1429 aa23.67■■□□□ 1.38
LST1-220ENST00000464526 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
LST1-220ENST00000464526 IL13P35225 146 aa23.66■■□□□ 1.38
LST1-220ENST00000464526 CSB-PGBD3P0DP91 1061 aa23.65■■□□□ 1.38
LST1-220ENST00000464526 NBPF6Q5VWK0 638 aa23.65■■□□□ 1.38
LST1-220ENST00000464526 NBPF4Q96M43 638 aa23.65■■□□□ 1.38
LST1-220ENST00000464526 EVA1CP58658 441 aa23.64■■□□□ 1.38
LST1-220ENST00000464526 POTEAQ6S8J7 498 aa23.64■■□□□ 1.38
LST1-220ENST00000464526 CRB1P82279 1406 aa23.63■■□□□ 1.37
LST1-220ENST00000464526 EYA1Q99502 592 aa23.63■■□□□ 1.37
LST1-220ENST00000464526 TOM1L2Q6ZVM7 507 aa23.62■■□□□ 1.37
LST1-220ENST00000464526 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
LST1-220ENST00000464526 NLRP2Q9NX02 1062 aa23.62■■□□□ 1.37
LST1-220ENST00000464526 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
LST1-220ENST00000464526 SPATA31A5Q5VU36 1347 aa23.61■■□□□ 1.37
LST1-220ENST00000464526 SPATA31A7Q8IWB4 1347 aa23.61■■□□□ 1.37
LST1-220ENST00000464526 VPS72Q15906 364 aa23.61■■□□□ 1.37
LST1-220ENST00000464526 CCDC9Q9Y3X0 531 aaKnown RBP23.61■■□□□ 1.37
LST1-220ENST00000464526 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
LST1-220ENST00000464526 SPATA31A1Q5TZJ5 1347 aa23.6■■□□□ 1.37
LST1-220ENST00000464526 DIAPH1O60610 1272 aaKnown RBP23.59■■□□□ 1.37
LST1-220ENST00000464526 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
LST1-220ENST00000464526 NCAPD2Q15021 1401 aa23.59■■□□□ 1.37
LST1-220ENST00000464526 MEGF6O75095 1541 aa23.59■■□□□ 1.37
LST1-220ENST00000464526 EP400Q96L91 3159 aa23.58■■□□□ 1.37
LST1-220ENST00000464526 IGSF1Q8N6C5 1336 aa23.58■■□□□ 1.36
LST1-220ENST00000464526 HMOX1P09601 288 aa23.56■■□□□ 1.36
LST1-220ENST00000464526 TRPC5Q9UL62 973 aaPredicted RBP23.56■■□□□ 1.36
LST1-220ENST00000464526 U2SURPO15042 1029 aaKnown RBP23.56■■□□□ 1.36
LST1-220ENST00000464526 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
LST1-220ENST00000464526 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
LST1-220ENST00000464526 CARD10Q9BWT7 1032 aa23.56■■□□□ 1.36
LST1-220ENST00000464526 FAM98CQ17RN3 349 aaKnown RBP23.55■■□□□ 1.36
LST1-220ENST00000464526 ZNF772Q68DY9 489 aaPredicted RBP23.55■■□□□ 1.36
LST1-220ENST00000464526 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
LST1-220ENST00000464526 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
LST1-220ENST00000464526 THSD7AQ9UPZ6 1657 aa23.53■■□□□ 1.36
LST1-220ENST00000464526 SULT6B1Q6IMI4 303 aa23.53■■□□□ 1.36
LST1-220ENST00000464526 LRRC37A3O60309 1634 aa23.52■■□□□ 1.36
LST1-220ENST00000464526 TCP11L2Q8N4U5 519 aa23.52■■□□□ 1.36
LST1-220ENST00000464526 KDRP35968 1356 aa23.51■■□□□ 1.35
LST1-220ENST00000464526 SHANK3Q9BYB0 1731 aa23.51■■□□□ 1.35
LST1-220ENST00000464526 RGS12O14924 1447 aa23.5■■□□□ 1.35
LST1-220ENST00000464526 U2AF1L5P0DN76 240 aaPredicted RBP23.49■■□□□ 1.35
LST1-220ENST00000464526 U2AF1Q01081 240 aaKnown RBP eCLIP23.49■■□□□ 1.35
LST1-220ENST00000464526 BRWD3Q6RI45 1802 aa23.47■■□□□ 1.35
LST1-220ENST00000464526 PARP4Q9UKK3 1724 aaKnown RBP23.47■■□□□ 1.35
LST1-220ENST00000464526 SENP3-EIF4A1A0A087X0R7 540 aa23.47■■□□□ 1.35
LST1-220ENST00000464526 PNISRQ8TF01 805 aaKnown RBP23.47■■□□□ 1.35
LST1-220ENST00000464526 RSPH6AQ9H0K4 717 aa23.47■■□□□ 1.35
LST1-220ENST00000464526 RBM6P78332 1123 aaKnown RBP23.46■■□□□ 1.35
LST1-220ENST00000464526 ADAMTS8Q9UP79 889 aa23.46■■□□□ 1.35
LST1-220ENST00000464526 OVOS2A0A0G2JMS6 1433 aa23.46■■□□□ 1.35
LST1-220ENST00000464526 BARGINQ6ZT62 677 aa23.45■■□□□ 1.34
LST1-220ENST00000464526 PKD1L3Q7Z443 1732 aa23.44■■□□□ 1.34
LST1-220ENST00000464526 IL2RBP14784 551 aa23.44■■□□□ 1.34
LST1-220ENST00000464526 RXRBP28702 533 aa23.44■■□□□ 1.34
LST1-220ENST00000464526 A0A0G2JS52 829 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms