RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 AATKQ6ZMQ8 1374 aa25.72■■□□□ 1.71
HMG20B-208ENST00000464304 KNSTRNQ9Y448 316 aa25.72■■□□□ 1.71
HMG20B-208ENST00000464304 ABCC6O95255 1503 aa25.72■■□□□ 1.71
HMG20B-208ENST00000464304 PER1O15534 1290 aaPredicted RBP25.71■■□□□ 1.71
HMG20B-208ENST00000464304 FBLN1P23142 703 aa25.71■■□□□ 1.71
HMG20B-208ENST00000464304 TRPC5Q9UL62 973 aaPredicted RBP25.71■■□□□ 1.71
HMG20B-208ENST00000464304 NSD2O96028 1365 aa25.7■■□□□ 1.71
HMG20B-208ENST00000464304 GLI3P10071 1580 aa25.7■■□□□ 1.71
HMG20B-208ENST00000464304 COL5A2P05997 1499 aaPredicted RBP25.69■■□□□ 1.7
HMG20B-208ENST00000464304 PEAK1Q9H792 1746 aa25.68■■□□□ 1.7
HMG20B-208ENST00000464304 AMER1Q5JTC6 1135 aaPredicted RBP25.67■■□□□ 1.7
HMG20B-208ENST00000464304 STRN4Q9NRL3 753 aa25.67■■□□□ 1.7
HMG20B-208ENST00000464304 BRWD3Q6RI45 1802 aa25.66■■□□□ 1.7
HMG20B-208ENST00000464304 VPS72Q15906 364 aa25.66■■□□□ 1.7
HMG20B-208ENST00000464304 AXIN2Q9Y2T1 843 aa25.66■■□□□ 1.7
HMG20B-208ENST00000464304 MAP3K19Q56UN5 1328 aa25.65■■□□□ 1.7
HMG20B-208ENST00000464304 RRS1Q15050 365 aaKnown RBP25.64■■□□□ 1.7
HMG20B-208ENST00000464304 RGPD2P0DJD1 1756 aa25.64■■□□□ 1.69
HMG20B-208ENST00000464304 GJD4Q96KN9 370 aaPredicted RBP25.63■■□□□ 1.69
HMG20B-208ENST00000464304 CCDC9Q9Y3X0 531 aaKnown RBP25.63■■□□□ 1.69
HMG20B-208ENST00000464304 EVA1CP58658 441 aa25.62■■□□□ 1.69
HMG20B-208ENST00000464304 WNK3Q9BYP7 1800 aa25.62■■□□□ 1.69
HMG20B-208ENST00000464304 FAM208AQ9UK61 1670 aaKnown RBP25.61■■□□□ 1.69
HMG20B-208ENST00000464304 TNNT2P45379 298 aaPredicted RBP25.6■■□□□ 1.69
HMG20B-208ENST00000464304 CC2D1BQ5T0F9 858 aaKnown RBP25.6■■□□□ 1.69
HMG20B-208ENST00000464304 LARP1Q6PKG0 1096 aaKnown RBP25.6■■□□□ 1.69
HMG20B-208ENST00000464304 SPATA31A5Q5VU36 1347 aa25.6■■□□□ 1.69
HMG20B-208ENST00000464304 SPATA31A7Q8IWB4 1347 aa25.6■■□□□ 1.69
HMG20B-208ENST00000464304 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
HMG20B-208ENST00000464304 NPC1L1Q9UHC9 1359 aa25.59■■□□□ 1.69
HMG20B-208ENST00000464304 AMPHP49418 695 aa25.59■■□□□ 1.69
HMG20B-208ENST00000464304 MORC1Q86VD1 984 aa25.59■■□□□ 1.69
HMG20B-208ENST00000464304 IP6K1Q92551 441 aa25.59■■□□□ 1.69
HMG20B-208ENST00000464304 BLMP54132 1417 aaPredicted RBP25.59■■□□□ 1.69
HMG20B-208ENST00000464304 HOXC9P31274 260 aa25.58■■□□□ 1.69
HMG20B-208ENST00000464304 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.69
HMG20B-208ENST00000464304 CRB1P82279 1406 aa25.57■■□□□ 1.68
HMG20B-208ENST00000464304 DDX10Q13206 875 aaKnown RBP25.57■■□□□ 1.68
HMG20B-208ENST00000464304 WDR17Q8IZU2 1322 aa25.57■■□□□ 1.68
HMG20B-208ENST00000464304 CNGB1Q14028 1251 aaPredicted RBP25.56■■□□□ 1.68
HMG20B-208ENST00000464304 ERBB3P21860 1342 aa25.56■■□□□ 1.68
HMG20B-208ENST00000464304 SPATA31A1Q5TZJ5 1347 aa25.56■■□□□ 1.68
HMG20B-208ENST00000464304 ZNF316A6NFI3 1004 aaPredicted RBP25.55■■□□□ 1.68
HMG20B-208ENST00000464304 FLT4P35916 1363 aa25.55■■□□□ 1.68
HMG20B-208ENST00000464304 KIF24Q5T7B8 1368 aa25.55■■□□□ 1.68
HMG20B-208ENST00000464304 THSD7AQ9UPZ6 1657 aa25.55■■□□□ 1.68
HMG20B-208ENST00000464304 CSB-PGBD3P0DP91 1061 aa25.54■■□□□ 1.68
HMG20B-208ENST00000464304 POLKQ9UBT6 870 aa25.54■■□□□ 1.68
HMG20B-208ENST00000464304 TOM1L2Q6ZVM7 507 aa25.53■■□□□ 1.68
HMG20B-208ENST00000464304 ANKRD24Q8TF21 1146 aa25.53■■□□□ 1.68
HMG20B-208ENST00000464304 USP35Q9P2H5 1018 aa25.53■■□□□ 1.68
HMG20B-208ENST00000464304 SMG6Q86US8 1419 aaKnown RBP25.53■■□□□ 1.68
HMG20B-208ENST00000464304 LTV1Q96GA3 475 aaPredicted RBP25.52■■□□□ 1.68
HMG20B-208ENST00000464304 PPM1GO15355 546 aaPredicted RBP25.51■■□□□ 1.67
HMG20B-208ENST00000464304 HSP90AB2PQ58FF8 381 aa25.51■■□□□ 1.67
HMG20B-208ENST00000464304 DEFB132Q7Z7B7 95 aa25.51■■□□□ 1.67
HMG20B-208ENST00000464304 INSRP06213 1382 aa25.5■■□□□ 1.67
HMG20B-208ENST00000464304 FAM98CQ17RN3 349 aaKnown RBP25.5■■□□□ 1.67
HMG20B-208ENST00000464304 PARP4Q9UKK3 1724 aaKnown RBP25.49■■□□□ 1.67
HMG20B-208ENST00000464304 TCP11L2Q8N4U5 519 aa25.48■■□□□ 1.67
HMG20B-208ENST00000464304 ONECUT3O60422 494 aaPredicted RBP25.47■■□□□ 1.67
HMG20B-208ENST00000464304 CCDC125Q86Z20 511 aa25.46■■□□□ 1.67
HMG20B-208ENST00000464304 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
HMG20B-208ENST00000464304 NLRP2Q9NX02 1062 aa25.46■■□□□ 1.67
HMG20B-208ENST00000464304 LRRC37A3O60309 1634 aa25.45■■□□□ 1.67
HMG20B-208ENST00000464304 BARGINQ6ZT62 677 aa25.45■■□□□ 1.66
HMG20B-208ENST00000464304 SEPT12Q8IYM1 358 aa25.45■■□□□ 1.66
HMG20B-208ENST00000464304 A0A0G2JS52 829 aa25.44■■□□□ 1.66
HMG20B-208ENST00000464304 MYT1Q01538 1121 aa25.44■■□□□ 1.66
HMG20B-208ENST00000464304 THRAP3Q9Y2W1 955 aaKnown RBP25.44■■□□□ 1.66
HMG20B-208ENST00000464304 LRP5O75197 1615 aa25.42■■□□□ 1.66
HMG20B-208ENST00000464304 DISP2A7MBM2 1401 aa25.41■■□□□ 1.66
HMG20B-208ENST00000464304 MTHFSP49914 203 aa25.4■■□□□ 1.66
HMG20B-208ENST00000464304 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
HMG20B-208ENST00000464304 RGPD1P0DJD0 1748 aa25.38■■□□□ 1.65
HMG20B-208ENST00000464304 NBPF6Q5VWK0 638 aa25.38■■□□□ 1.65
HMG20B-208ENST00000464304 NBPF4Q96M43 638 aa25.38■■□□□ 1.65
HMG20B-208ENST00000464304 EIF4A2Q14240 407 aaKnown RBP25.37■■□□□ 1.65
HMG20B-208ENST00000464304 USHBP1Q8N6Y0 703 aa25.36■■□□□ 1.65
HMG20B-208ENST00000464304 SHANK3Q9BYB0 1731 aa25.35■■□□□ 1.65
HMG20B-208ENST00000464304 PPP2R1AP30153 589 aa25.35■■□□□ 1.65
HMG20B-208ENST00000464304 COL3A1P02461 1466 aaPredicted RBP25.34■■□□□ 1.65
HMG20B-208ENST00000464304 NCAPD2Q15021 1401 aa25.34■■□□□ 1.65
HMG20B-208ENST00000464304 PSDA5PKW4 1024 aaPredicted RBP25.33■■□□□ 1.65
HMG20B-208ENST00000464304 IL2RBP14784 551 aa25.33■■□□□ 1.65
HMG20B-208ENST00000464304 KRT27Q7Z3Y8 459 aa25.33■■□□□ 1.65
HMG20B-208ENST00000464304 CDCA7Q9BWT1 371 aaPredicted RBP25.33■■□□□ 1.65
HMG20B-208ENST00000464304 MEGF6O75095 1541 aa25.32■■□□□ 1.64
HMG20B-208ENST00000464304 EYA1Q99502 592 aa25.32■■□□□ 1.64
HMG20B-208ENST00000464304 TNS2Q63HR2 1409 aa25.3■■□□□ 1.64
HMG20B-208ENST00000464304 DDB1Q16531 1140 aa25.3■■□□□ 1.64
HMG20B-208ENST00000464304 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
HMG20B-208ENST00000464304 SBF2Q86WG5 1849 aa25.29■■□□□ 1.64
HMG20B-208ENST00000464304 IL13P35225 146 aa25.28■■□□□ 1.64
HMG20B-208ENST00000464304 RALBP1Q15311 655 aa25.28■■□□□ 1.64
HMG20B-208ENST00000464304 IGSF1Q8N6C5 1336 aa25.28■■□□□ 1.64
HMG20B-208ENST00000464304 PDE3BQ13370 1112 aa25.27■■□□□ 1.64
HMG20B-208ENST00000464304 FAM182BQ5T319 152 aa25.27■■□□□ 1.64
HMG20B-208ENST00000464304 OVOS2A0A0G2JMS6 1433 aa25.27■■□□□ 1.64
HMG20B-208ENST00000464304 KAT6BQ8WYB5 2073 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms