RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 VPS72Q15906 364 aa25.9■■□□□ 1.74
LMNB1-204ENST00000463908 NWD2Q9ULI1 1742 aa25.9■■□□□ 1.74
LMNB1-204ENST00000463908 CC2D1BQ5T0F9 858 aaKnown RBP25.89■■□□□ 1.74
LMNB1-204ENST00000463908 MORC1Q86VD1 984 aa25.89■■□□□ 1.74
LMNB1-204ENST00000463908 RXRBP28702 533 aa25.88■■□□□ 1.73
LMNB1-204ENST00000463908 TNNT2P45379 298 aaPredicted RBP25.88■■□□□ 1.73
LMNB1-204ENST00000463908 EVA1CP58658 441 aa25.88■■□□□ 1.73
LMNB1-204ENST00000463908 IP6K1Q92551 441 aa25.88■■□□□ 1.73
LMNB1-204ENST00000463908 STRN4Q9NRL3 753 aa25.88■■□□□ 1.73
LMNB1-204ENST00000463908 NPC1L1Q9UHC9 1359 aa25.87■■□□□ 1.73
LMNB1-204ENST00000463908 GJD4Q96KN9 370 aaPredicted RBP25.87■■□□□ 1.73
LMNB1-204ENST00000463908 NRAPQ86VF7 1730 aa25.87■■□□□ 1.73
LMNB1-204ENST00000463908 LARP1Q6PKG0 1096 aaKnown RBP25.86■■□□□ 1.73
LMNB1-204ENST00000463908 HOXC9P31274 260 aa25.85■■□□□ 1.73
LMNB1-204ENST00000463908 RBM6P78332 1123 aaKnown RBP25.85■■□□□ 1.73
LMNB1-204ENST00000463908 CNGB1Q14028 1251 aaPredicted RBP25.85■■□□□ 1.73
LMNB1-204ENST00000463908 POLKQ9UBT6 870 aa25.85■■□□□ 1.73
LMNB1-204ENST00000463908 EMILIN1Q9Y6C2 1016 aa25.85■■□□□ 1.73
LMNB1-204ENST00000463908 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.85■■□□□ 1.73
LMNB1-204ENST00000463908 COL5A2P05997 1499 aaPredicted RBP25.85■■□□□ 1.73
LMNB1-204ENST00000463908 AMPHP49418 695 aa25.84■■□□□ 1.73
LMNB1-204ENST00000463908 ANKRD26Q9UPS8 1709 aa25.84■■□□□ 1.73
LMNB1-204ENST00000463908 RGS12O14924 1447 aa25.83■■□□□ 1.73
LMNB1-204ENST00000463908 LTN1O94822 1766 aa25.83■■□□□ 1.73
LMNB1-204ENST00000463908 SPATA31A5Q5VU36 1347 aa25.82■■□□□ 1.72
LMNB1-204ENST00000463908 SPATA31A7Q8IWB4 1347 aa25.82■■□□□ 1.72
LMNB1-204ENST00000463908 HSP90AB2PQ58FF8 381 aa25.81■■□□□ 1.72
LMNB1-204ENST00000463908 CCDC9Q9Y3X0 531 aaKnown RBP25.81■■□□□ 1.72
LMNB1-204ENST00000463908 RGPD5Q99666 1765 aa25.8■■□□□ 1.72
LMNB1-204ENST00000463908 ABCC6O95255 1503 aa25.8■■□□□ 1.72
LMNB1-204ENST00000463908 SPATA31A1Q5TZJ5 1347 aa25.8■■□□□ 1.72
LMNB1-204ENST00000463908 ANKRD24Q8TF21 1146 aa25.79■■□□□ 1.72
LMNB1-204ENST00000463908 WDR17Q8IZU2 1322 aa25.79■■□□□ 1.72
LMNB1-204ENST00000463908 GLI3P10071 1580 aa25.78■■□□□ 1.72
LMNB1-204ENST00000463908 PEAK1Q9H792 1746 aa25.78■■□□□ 1.72
LMNB1-204ENST00000463908 PPM1GO15355 546 aaPredicted RBP25.78■■□□□ 1.72
LMNB1-204ENST00000463908 ERBB3P21860 1342 aa25.78■■□□□ 1.72
LMNB1-204ENST00000463908 BLMP54132 1417 aaPredicted RBP25.78■■□□□ 1.72
LMNB1-204ENST00000463908 ONECUT3O60422 494 aaPredicted RBP25.77■■□□□ 1.72
LMNB1-204ENST00000463908 LTV1Q96GA3 475 aaPredicted RBP25.77■■□□□ 1.72
LMNB1-204ENST00000463908 RTL1A6NKG5 1358 aa25.77■■□□□ 1.72
LMNB1-204ENST00000463908 KIF24Q5T7B8 1368 aa25.77■■□□□ 1.72
LMNB1-204ENST00000463908 CSB-PGBD3P0DP91 1061 aa25.76■■□□□ 1.71
LMNB1-204ENST00000463908 TOM1L2Q6ZVM7 507 aa25.76■■□□□ 1.71
LMNB1-204ENST00000463908 USP35Q9P2H5 1018 aa25.76■■□□□ 1.71
LMNB1-204ENST00000463908 MAP2P11137 1827 aaKnown RBP25.75■■□□□ 1.71
LMNB1-204ENST00000463908 FLT4P35916 1363 aa25.75■■□□□ 1.71
LMNB1-204ENST00000463908 CRB1P82279 1406 aa25.74■■□□□ 1.71
LMNB1-204ENST00000463908 INSRP06213 1382 aa25.74■■□□□ 1.71
LMNB1-204ENST00000463908 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
LMNB1-204ENST00000463908 CARD10Q9BWT7 1032 aa25.73■■□□□ 1.71
LMNB1-204ENST00000463908 SRCAPQ6ZRS2 3230 aa25.73■■□□□ 1.71
LMNB1-204ENST00000463908 TCP11L2Q8N4U5 519 aa25.72■■□□□ 1.71
LMNB1-204ENST00000463908 MTHFSP49914 203 aa25.71■■□□□ 1.71
LMNB1-204ENST00000463908 NLRP2Q9NX02 1062 aa25.71■■□□□ 1.71
LMNB1-204ENST00000463908 SMG6Q86US8 1419 aaKnown RBP25.71■■□□□ 1.71
LMNB1-204ENST00000463908 BARGINQ6ZT62 677 aa25.7■■□□□ 1.7
LMNB1-204ENST00000463908 EP400Q96L91 3159 aa25.7■■□□□ 1.7
LMNB1-204ENST00000463908 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
LMNB1-204ENST00000463908 THRAP3Q9Y2W1 955 aaKnown RBP25.69■■□□□ 1.7
LMNB1-204ENST00000463908 NBPF6Q5VWK0 638 aa25.68■■□□□ 1.7
LMNB1-204ENST00000463908 NBPF4Q96M43 638 aa25.68■■□□□ 1.7
LMNB1-204ENST00000463908 PPP2R1AP30153 589 aa25.67■■□□□ 1.7
LMNB1-204ENST00000463908 EIF4A2Q14240 407 aaKnown RBP25.66■■□□□ 1.7
LMNB1-204ENST00000463908 PARD3Q8TEW0 1356 aa25.66■■□□□ 1.7
LMNB1-204ENST00000463908 EYA1Q99502 592 aa25.62■■□□□ 1.69
LMNB1-204ENST00000463908 USHBP1Q8N6Y0 703 aa25.61■■□□□ 1.69
LMNB1-204ENST00000463908 IL13P35225 146 aa25.6■■□□□ 1.69
LMNB1-204ENST00000463908 RALBP1Q15311 655 aa25.6■■□□□ 1.69
LMNB1-204ENST00000463908 RGPD2P0DJD1 1756 aa25.59■■□□□ 1.69
LMNB1-204ENST00000463908 THSD7AQ9UPZ6 1657 aa25.59■■□□□ 1.69
LMNB1-204ENST00000463908 A0A0G2JS52 829 aa25.59■■□□□ 1.69
LMNB1-204ENST00000463908 MYT1Q01538 1121 aa25.59■■□□□ 1.69
LMNB1-204ENST00000463908 DISP2A7MBM2 1401 aa25.59■■□□□ 1.69
LMNB1-204ENST00000463908 CDCA7Q9BWT1 371 aaPredicted RBP25.57■■□□□ 1.68
LMNB1-204ENST00000463908 FAM208AQ9UK61 1670 aaKnown RBP25.56■■□□□ 1.68
LMNB1-204ENST00000463908 IL2RBP14784 551 aa25.56■■□□□ 1.68
LMNB1-204ENST00000463908 PRKRIP1Q9H875 184 aaPredicted RBP25.56■■□□□ 1.68
LMNB1-204ENST00000463908 KRT27Q7Z3Y8 459 aa25.55■■□□□ 1.68
LMNB1-204ENST00000463908 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
LMNB1-204ENST00000463908 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
LMNB1-204ENST00000463908 COL3A1P02461 1466 aaPredicted RBP25.53■■□□□ 1.68
LMNB1-204ENST00000463908 IGSF1Q8N6C5 1336 aa25.53■■□□□ 1.68
LMNB1-204ENST00000463908 BRWD3Q6RI45 1802 aa25.53■■□□□ 1.68
LMNB1-204ENST00000463908 DDB1Q16531 1140 aa25.52■■□□□ 1.68
LMNB1-204ENST00000463908 EXOC5O00471 708 aa25.51■■□□□ 1.67
LMNB1-204ENST00000463908 FAM182BQ5T319 152 aa25.51■■□□□ 1.67
LMNB1-204ENST00000463908 PDE3BQ13370 1112 aa25.5■■□□□ 1.67
LMNB1-204ENST00000463908 PARP4Q9UKK3 1724 aaKnown RBP25.49■■□□□ 1.67
LMNB1-204ENST00000463908 MEGF6O75095 1541 aa25.49■■□□□ 1.67
LMNB1-204ENST00000463908 AEBP1Q8IUX7 1158 aa25.49■■□□□ 1.67
LMNB1-204ENST00000463908 CFAP53Q96M91 514 aa25.49■■□□□ 1.67
LMNB1-204ENST00000463908 MYBBP1AQ9BQG0 1328 aaKnown RBP25.48■■□□□ 1.67
LMNB1-204ENST00000463908 MARCH10Q8NA82 808 aaPredicted RBP25.48■■□□□ 1.67
LMNB1-204ENST00000463908 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
LMNB1-204ENST00000463908 WNK3Q9BYP7 1800 aa25.48■■□□□ 1.67
LMNB1-204ENST00000463908 SULT6B1Q6IMI4 303 aa25.47■■□□□ 1.67
LMNB1-204ENST00000463908 TATP17735 454 aaPredicted RBP25.46■■□□□ 1.67
LMNB1-204ENST00000463908 LRRC37A3O60309 1634 aa25.45■■□□□ 1.67
LMNB1-204ENST00000463908 ZCRB1Q8TBF4 217 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms