RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CAMTA1Q9Y6Y1 1673 aa27■■□□□ 1.91
COL9A3-204ENST00000463487 AMPHP49418 695 aa26.99■■□□□ 1.91
COL9A3-204ENST00000463487 AMER1Q5JTC6 1135 aaPredicted RBP26.99■■□□□ 1.91
COL9A3-204ENST00000463487 RTL1A6NKG5 1358 aa26.98■■□□□ 1.91
COL9A3-204ENST00000463487 NPC1L1Q9UHC9 1359 aa26.98■■□□□ 1.91
COL9A3-204ENST00000463487 GJD4Q96KN9 370 aaPredicted RBP26.98■■□□□ 1.91
COL9A3-204ENST00000463487 COL5A2P05997 1499 aaPredicted RBP26.98■■□□□ 1.91
COL9A3-204ENST00000463487 KIF24Q5T7B8 1368 aa26.97■■□□□ 1.91
COL9A3-204ENST00000463487 MAP3K19Q56UN5 1328 aa26.97■■□□□ 1.91
COL9A3-204ENST00000463487 BLMP54132 1417 aaPredicted RBP26.97■■□□□ 1.91
COL9A3-204ENST00000463487 COL18A1P39060 1754 aa26.97■■□□□ 1.91
COL9A3-204ENST00000463487 IP6K1Q92551 441 aa26.95■■□□□ 1.9
COL9A3-204ENST00000463487 ZNF316A6NFI3 1004 aaPredicted RBP26.94■■□□□ 1.9
COL9A3-204ENST00000463487 CSB-PGBD3P0DP91 1061 aa26.94■■□□□ 1.9
COL9A3-204ENST00000463487 RRS1Q15050 365 aaKnown RBP26.94■■□□□ 1.9
COL9A3-204ENST00000463487 TNNT2P45379 298 aaPredicted RBP26.93■■□□□ 1.9
COL9A3-204ENST00000463487 AXIN2Q9Y2T1 843 aa26.93■■□□□ 1.9
COL9A3-204ENST00000463487 CDK12Q9NYV4 1490 aaPredicted RBP26.93■■□□□ 1.9
COL9A3-204ENST00000463487 CC2D1BQ5T0F9 858 aaKnown RBP26.92■■□□□ 1.9
COL9A3-204ENST00000463487 FLT4P35916 1363 aa26.92■■□□□ 1.9
COL9A3-204ENST00000463487 SPATA31A5Q5VU36 1347 aa26.91■■□□□ 1.9
COL9A3-204ENST00000463487 SPATA31A7Q8IWB4 1347 aa26.91■■□□□ 1.9
COL9A3-204ENST00000463487 WDR17Q8IZU2 1322 aa26.91■■□□□ 1.9
COL9A3-204ENST00000463487 CRB1P82279 1406 aa26.91■■□□□ 1.9
COL9A3-204ENST00000463487 HOXC9P31274 260 aa26.91■■□□□ 1.9
COL9A3-204ENST00000463487 SMG6Q86US8 1419 aaKnown RBP26.9■■□□□ 1.9
COL9A3-204ENST00000463487 FBLN1P23142 703 aa26.9■■□□□ 1.9
COL9A3-204ENST00000463487 DDX10Q13206 875 aaKnown RBP26.9■■□□□ 1.9
COL9A3-204ENST00000463487 LARP1Q6PKG0 1096 aaKnown RBP26.9■■□□□ 1.9
COL9A3-204ENST00000463487 TOM1L2Q6ZVM7 507 aa26.9■■□□□ 1.9
COL9A3-204ENST00000463487 RGPD5Q99666 1765 aa26.89■■□□□ 1.9
COL9A3-204ENST00000463487 PPM1GO15355 546 aaPredicted RBP26.89■■□□□ 1.9
COL9A3-204ENST00000463487 ERBB3P21860 1342 aa26.89■■□□□ 1.89
COL9A3-204ENST00000463487 SPATA31A1Q5TZJ5 1347 aa26.89■■□□□ 1.89
COL9A3-204ENST00000463487 ANKRD24Q8TF21 1146 aa26.88■■□□□ 1.89
COL9A3-204ENST00000463487 GLI3P10071 1580 aa26.88■■□□□ 1.89
COL9A3-204ENST00000463487 THRAP3Q9Y2W1 955 aaKnown RBP26.87■■□□□ 1.89
COL9A3-204ENST00000463487 MAP2P11137 1827 aaKnown RBP26.86■■□□□ 1.89
COL9A3-204ENST00000463487 USP35Q9P2H5 1018 aa26.86■■□□□ 1.89
COL9A3-204ENST00000463487 EMILIN1Q9Y6C2 1016 aa26.86■■□□□ 1.89
COL9A3-204ENST00000463487 INSRP06213 1382 aa26.85■■□□□ 1.89
COL9A3-204ENST00000463487 A0A0G2JS52 829 aa26.85■■□□□ 1.89
COL9A3-204ENST00000463487 MYT1Q01538 1121 aa26.85■■□□□ 1.89
COL9A3-204ENST00000463487 CNGB1Q14028 1251 aaPredicted RBP26.85■■□□□ 1.89
COL9A3-204ENST00000463487 TCP11L2Q8N4U5 519 aa26.85■■□□□ 1.89
COL9A3-204ENST00000463487 POLKQ9UBT6 870 aa26.85■■□□□ 1.89
COL9A3-204ENST00000463487 FAM208AQ9UK61 1670 aaKnown RBP26.85■■□□□ 1.89
COL9A3-204ENST00000463487 LTV1Q96GA3 475 aaPredicted RBP26.83■■□□□ 1.89
COL9A3-204ENST00000463487 CARD10Q9BWT7 1032 aa26.83■■□□□ 1.89
COL9A3-204ENST00000463487 NLRP2Q9NX02 1062 aa26.83■■□□□ 1.89
COL9A3-204ENST00000463487 FAM98CQ17RN3 349 aaKnown RBP26.82■■□□□ 1.88
COL9A3-204ENST00000463487 BARGINQ6ZT62 677 aa26.82■■□□□ 1.88
COL9A3-204ENST00000463487 RGS12O14924 1447 aa26.82■■□□□ 1.88
COL9A3-204ENST00000463487 PEAK1Q9H792 1746 aa26.81■■□□□ 1.88
COL9A3-204ENST00000463487 HSP90AB2PQ58FF8 381 aa26.8■■□□□ 1.88
COL9A3-204ENST00000463487 ILDR2Q71H61 639 aa26.8■■□□□ 1.88
COL9A3-204ENST00000463487 ONECUT3O60422 494 aaPredicted RBP26.79■■□□□ 1.88
COL9A3-204ENST00000463487 CDCA7Q9BWT1 371 aaPredicted RBP26.79■■□□□ 1.88
COL9A3-204ENST00000463487 SEPT12Q8IYM1 358 aa26.77■■□□□ 1.88
COL9A3-204ENST00000463487 THSD7AQ9UPZ6 1657 aa26.73■■□□□ 1.87
COL9A3-204ENST00000463487 MTHFSP49914 203 aa26.73■■□□□ 1.87
COL9A3-204ENST00000463487 RALBP1Q15311 655 aa26.71■■□□□ 1.87
COL9A3-204ENST00000463487 CFAP53Q96M91 514 aa26.7■■□□□ 1.86
COL9A3-204ENST00000463487 PARD3Q8TEW0 1356 aa26.7■■□□□ 1.86
COL9A3-204ENST00000463487 IL2RBP14784 551 aa26.69■■□□□ 1.86
COL9A3-204ENST00000463487 WNK3Q9BYP7 1800 aa26.69■■□□□ 1.86
COL9A3-204ENST00000463487 PDE3BQ13370 1112 aa26.68■■□□□ 1.86
COL9A3-204ENST00000463487 EIF4A2Q14240 407 aaKnown RBP26.68■■□□□ 1.86
COL9A3-204ENST00000463487 KRT27Q7Z3Y8 459 aa26.68■■□□□ 1.86
COL9A3-204ENST00000463487 PARP4Q9UKK3 1724 aaKnown RBP26.68■■□□□ 1.86
COL9A3-204ENST00000463487 NBPF6Q5VWK0 638 aa26.67■■□□□ 1.86
COL9A3-204ENST00000463487 NBPF4Q96M43 638 aa26.67■■□□□ 1.86
COL9A3-204ENST00000463487 PPP2R1AP30153 589 aa26.66■■□□□ 1.86
COL9A3-204ENST00000463487 DDB1Q16531 1140 aa26.66■■□□□ 1.86
COL9A3-204ENST00000463487 RAPGEF4Q8WZA2 1011 aa26.66■■□□□ 1.86
COL9A3-204ENST00000463487 DISP2A7MBM2 1401 aa26.65■■□□□ 1.86
COL9A3-204ENST00000463487 RGPD2P0DJD1 1756 aa26.64■■□□□ 1.86
COL9A3-204ENST00000463487 BRWD3Q6RI45 1802 aa26.64■■□□□ 1.85
COL9A3-204ENST00000463487 EXOC5O00471 708 aa26.63■■□□□ 1.85
COL9A3-204ENST00000463487 DIAPH1O60610 1272 aaKnown RBP26.63■■□□□ 1.85
COL9A3-204ENST00000463487 USHBP1Q8N6Y0 703 aa26.62■■□□□ 1.85
COL9A3-204ENST00000463487 EYA1Q99502 592 aa26.62■■□□□ 1.85
COL9A3-204ENST00000463487 LRRC37A3O60309 1634 aa26.61■■□□□ 1.85
COL9A3-204ENST00000463487 TATP17735 454 aaPredicted RBP26.61■■□□□ 1.85
COL9A3-204ENST00000463487 TNS2Q63HR2 1409 aa26.6■■□□□ 1.85
COL9A3-204ENST00000463487 IGSF1Q8N6C5 1336 aa26.6■■□□□ 1.85
COL9A3-204ENST00000463487 NCAPD2Q15021 1401 aa26.59■■□□□ 1.85
COL9A3-204ENST00000463487 IL13P35225 146 aa26.59■■□□□ 1.85
COL9A3-204ENST00000463487 MYBBP1AQ9BQG0 1328 aaKnown RBP26.59■■□□□ 1.85
COL9A3-204ENST00000463487 NUDCQ9Y266 331 aa26.57■■□□□ 1.84
COL9A3-204ENST00000463487 PRKRIP1Q9H875 184 aaPredicted RBP26.56■■□□□ 1.84
COL9A3-204ENST00000463487 PLEKHG2Q9H7P9 1386 aa26.56■■□□□ 1.84
COL9A3-204ENST00000463487 OVOS2A0A0G2JMS6 1433 aa26.56■■□□□ 1.84
COL9A3-204ENST00000463487 SOCS7O14512 581 aa26.55■■□□□ 1.84
COL9A3-204ENST00000463487 COL3A1P02461 1466 aaPredicted RBP26.55■■□□□ 1.84
COL9A3-204ENST00000463487 MEGF6O75095 1541 aa26.55■■□□□ 1.84
COL9A3-204ENST00000463487 FAM196AQ6ZSG2 479 aa26.54■■□□□ 1.84
COL9A3-204ENST00000463487 ANP32CO43423 234 aa26.53■■□□□ 1.84
COL9A3-204ENST00000463487 ZCRB1Q8TBF4 217 aaKnown RBP26.53■■□□□ 1.84
COL9A3-204ENST00000463487 U2SURPO15042 1029 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms